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TissGeneSummary for CYP3A7 |
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Basic gene information | Gene symbol | CYP3A7 |
Gene name | cytochrome P450, family 3, subfamily A, polypeptide 7 | |
Synonyms | CP37|CYPIIIA7|P-450(HFL33)|P-450111A7|P450-HFLA | |
Cytomap | UCSC genome browser: 7q21-q22.1 | |
Type of gene | protein-coding | |
RefGenes | NM_000765.4, | |
Description | aryl hydrocarbon hydroxylasecytochrome P450 3A7cytochrome P450, subfamily IIIA, polypeptide 7cytochrome P450-HFLAflavoprotein-linked monooxygenasemicrosomal monooxygenasexenobiotic monooxygenase | |
Modification date | 20141207 | |
dbXrefs | MIM : 605340 | |
HGNC : HGNC | ||
Ensembl : ENSG00000160870 | ||
HPRD : 05630 | ||
Vega : OTTHUMG00000156726 | ||
Protein | UniProt: go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_CYP3A7 | |
BioGPS: 1551 | ||
Pathway | NCI Pathway Interaction Database: CYP3A7 | |
KEGG: CYP3A7 | ||
REACTOME: CYP3A7 | ||
Pathway Commons: CYP3A7 | ||
Context | iHOP: CYP3A7 | |
ligand binding site mutation search in PubMed: CYP3A7 | ||
UCL Cancer Institute: CYP3A7 | ||
Assigned class in TissGDB* | A | |
Included tissue-specific gene expression resources | HPA,TiGER,GTEx | |
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx) | Liver | |
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA) | LIHC | |
Reference showing the relevant tissue of CYP3A7 | Toxicogenomics directory of chemically exposed human hepatocytes. Grinberg M, Stöber RM, Edlund K, Rempel E, Godoy P, Reif R, Widera A, Madjar K, Schmidt-Heck W, Marchan R, Sachinidis A, Spitkovsky D, Hescheler J, Carmo H, Arbo MD, van de Water B, Wink S, Vinken M, Rogiers V, Escher S, Hardy B, Mitic D, Myatt G, Waldmann T, Mardinoglu A, Damm G, Seehofer D, Nüssler A, Weiss TS, Oberemm A, Lampen A, Schaap MM, Luijten M, van Steeg H, Thasler WE, Kleinjans JC, Stierum RH, Leist M, Rahnenführer J, Hengstler JG. Arch Toxicol. 2014 Dec;88(12):2261-87. doi: 10.1007/s00204-014-1400-x. Epub 2014 Nov 16. (pmid:25399406) go to article | |
Description by TissGene annotations |
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C. |
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GO ID | GO term | PubMed ID |
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TissGeneExp for CYP3A7 |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
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![]() (TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01) |
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![]() (GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct) - Here, we shows the matched tissue types only among our 28 cancer types. |
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![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
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- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05) |
Cancer type | Mean(exp) in tumor | Mean(exp) in matched normal | Log2FC | P-val. | FDR |
LIHC | 7.637232453 | 10.06093645 | -2.423704 | 1.69E-06 | 8.61E-06 |
KIRP | 2.006751453 | 4.337904578 | -2.331153125 | 1.05E-05 | 4.36E-05 |
LUSC | -0.066895115 | 3.240479395 | -3.30737451 | 1.61E-22 | 2.55E-21 |
PRAD | 0.074501453 | 1.984114915 | -1.909613462 | 1.54E-08 | 1.83E-07 |
LUAD | -0.284283891 | 3.27088335 | -3.555167241 | 1.72E-29 | 1.75E-27 |
KICH | 5.630238453 | 3.429206453 | 2.201032 | 0.00304 | 0.006014506 |
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TissGene-miRNA for CYP3A7 |
![]() (Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016) (TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21) (TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16) (Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25)) |
Cancer type | miRNA id | miRNA accession | P-val. | Coeff. | # samples |
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TissGeneMut for CYP3A7 |
TissGeneSNV for CYP3A7 |
![]() Different colors of circles represent different cancer types. Circle size denotes number of samples. (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) * Click on the image to enlarge it in a new window. |
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![]() (X-axis: cancer type and Y-axis: % of mutated samples) The numbers in parentheses are numbers of samples with mutation (nsSNVs). (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) |
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- nsSNVs sorted by frequency. |
AAchange | Cancer type | # samples |
p.E334K | SKCM | 3 |
p.M452I | SKCM | 2 |
p.E308K | SKCM | 2 |
p.W126* | SKCM | 2 |
p.R28H | SARC | 1 |
p.R28C | SARC | 1 |
p.E374D | BLCA | 1 |
p.M371K | SARC | 1 |
p.R162Q | BLCA | 1 |
p.Y23C | GBM | 1 |
p.D348N | SKCM | 1 |
p.P215L | CESC | 1 |
p.G436E | SKCM | 1 |
p.V111M | STAD | 1 |
p.F33V | READ | 1 |
p.L491I | THYM | 1 |
p.R158K | SKCM | 1 |
p.E125X | STAD | 1 |
p.V381A | BRCA | 1 |
p.E417K | HNSC | 1 |
p.W408* | SKCM | 1 |
p.E412D | UCEC | 1 |
p.F189I | SKCM | 1 |
p.P416S | SKCM | 1 |
p.E10G | SKCM | 1 |
p.R162W | BRCA | 1 |
p.S464F | SKCM | 1 |
p.L449V | BLCA | 1 |
p.P227S | SKCM | 1 |
p.F228L | BLCA | 1 |
p.Y355C | PAAD | 1 |
p.N262D | UCEC | 1 |
p.K254T | SKCM | 1 |
p.R28H | UCEC | 1 |
p.I246M | SKCM | 1 |
p.R158I | UCEC | 1 |
p.M275I | LUAD | 1 |
p.V338L | BLCA | 1 |
p.G37E | SKCM | 1 |
p.G190X | KIRC | 1 |
p.Q332X | COAD | 1 |
p.E163D | LIHC | 1 |
p.G140R | GBM | 1 |
p.S100F | BRCA | 1 |
p.E165Q | BLCA | 1 |
p.V71I | SKCM | 1 |
p.G177E | SKCM | 1 |
p.T59R | LUAD | 1 |
p.L272I | ESCA | 1 |
p.Y432C | PRAD | 1 |
p.H324N | LUAD | 1 |
p.R161K | SARC | 1 |
p.S278F | STAD | 1 |
p.G385E | SKCM | 1 |
p.D88N | UCEC | 1 |
p.P218S | COAD | 1 |
p.Y307* | BLCA | 1 |
p.G391R | SKCM | 1 |
p.F226C | UCEC | 1 |
p.K35X | KIRP | 1 |
p.G31E | SKCM | 1 |
p.G112R | SKCM | 1 |
p.R130Q | SKCM | 1 |
p.D201Y | PAAD | 1 |
p.R54C | COAD | 1 |
p.R260C | COAD | 1 |
p.R243K | SKCM | 1 |
p.V175I | COAD | 1 |
p.W72* | BLCA | 1 |
p.G438R | SKCM | 1 |
p.G190* | KIRC | 1 |
p.P43S | LUAD | 1 |
p.G186A | GBM | 1 |
p.D425N | SKCM | 1 |
p.K35* | KIRP | 1 |
p.P397A | LUSC | 1 |
p.N451S | STAD | 1 |
p.H324Y | BRCA | 1 |
p.E125* | STAD | 1 |
p.Q279* | LUAD | 1 |
p.N237T | GBM | 1 |
p.L14I | UCEC | 1 |
p.L221F | SKCM | 1 |
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TissGeneCNV for CYP3A7 |
![]() (TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16) |
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TissGeneFusions for CYP3A7 |
![]() (ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01) |
Database | Src | Cancer type | Sample | Fusion gene | ORF | 5'-gene BP | 3'-gene BP |
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TissGeneNet for CYP3A7 |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (PINA2 ppi data) |
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TissGeneProg for CYP3A7 |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image to enlarge it in a new window. |
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![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
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![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
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![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
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TissGeneClin for CYP3A7 |
TissGeneDrug for CYP3A7 |
![]() (DrugBank Version 5.0.6, 2017-04-01) |
DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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TissGeneDisease for CYP3A7 |
![]() (DisGeNet, 2016-06-01) |
Disease ID | Disease name | # pubmeds | Source |
umls:C0242379 | Malignant neoplasm of lung | 5 | BeFree,GAD |
umls:C0684249 | Carcinoma of lung | 4 | BeFree |
umls:C2239176 | Liver carcinoma | 3 | BeFree |
umls:C0006142 | Malignant neoplasm of breast | 2 | BeFree,GAD |
umls:C0005684 | Malignant neoplasm of urinary bladder | 1 | GAD |
umls:C0019163 | Hepatitis B | 1 | BeFree |
umls:C0023890 | Liver Cirrhosis | 1 | BeFree |
umls:C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_mouse |
umls:C0023903 | Liver neoplasms | 1 | BeFree |
umls:C0024117 | Chronic Obstructive Airway Disease | 1 | GAD |
umls:C0027720 | Nephrosis | 1 | CTD_rat |
umls:C0029928 | Ovarian Diseases | 1 | BeFree |
umls:C0032460 | Polycystic Ovary Syndrome | 1 | BeFree,GAD,LHGDN |
umls:C0153594 | Malignant neoplasm of testis | 1 | BeFree |
umls:C0376358 | Malignant neoplasm of prostate | 1 | GAD |
umls:C0596263 | Carcinogenesis | 1 | BeFree |
umls:C0677886 | Epithelial ovarian cancer | 1 | GAD |
umls:C0678222 | Breast Carcinoma | 1 | BeFree |
umls:C0855197 | Testicular malignant germ cell tumor | 1 | BeFree |
umls:C1623038 | Cirrhosis | 1 | BeFree |