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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory

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TissGeneSummary

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TissGeneExp

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TissGene-miRNA

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TissGeneMut: TissGeneSNV, TissGeneCNV, and TissGeneFusions

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TissGeneNet

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TissGeneProg

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TissGeneClin: TissGeneDrug and TissGeneDisease

TissGeneSummary for KNG1
check button Gene summary
Basic gene informationGene symbolKNG1
Gene namekininogen 1
SynonymsBDK|BK|KNG
CytomapUCSC genome browser: 3q27
Type of geneprotein-coding
RefGenesNM_000893.3,
NM_001102416.2,NM_001166451.1,
DescriptionHMWKalpha-2-thiol proteinase inhibitorbradykininfitzgerald factorhigh molecular weight kininogenkininogen-1williams-Fitzgerald-Flaujeac factor
Modification date20141211
dbXrefs MIM : 612358
HGNC : HGNC
HPRD : 01970
ProteinUniProt:
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_KNG1
BioGPS: 3827
PathwayNCI Pathway Interaction Database: KNG1
KEGG: KNG1
REACTOME: KNG1
Pathway Commons: KNG1
ContextiHOP: KNG1
ligand binding site mutation search in PubMed: KNG1
UCL Cancer Institute: KNG1
Assigned class in TissGDB*C
Included tissue-specific gene expression resourcesTiGER,GTEx
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx)KidneyLiver
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA)KIRC,KIRP,KICHLIHC
Reference showing the relevant tissue of KNG1
Description by TissGene annotationsTissgsKTS
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C.

check button Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO termPubMed ID
GO:0007162negative regulation of cell adhesion11970955
GO:0007204positive regulation of cytosolic calcium ion concentration16014619
GO:0010951negative regulation of endopeptidase activity3488317
GO:0030195negative regulation of blood coagulation11970955
GO:0045861negative regulation of proteolysis3488317
GO:0007162negative regulation of cell adhesion11970955
GO:0007204positive regulation of cytosolic calcium ion concentration16014619
GO:0010951negative regulation of endopeptidase activity3488317
GO:0030195negative regulation of blood coagulation11970955
GO:0045861negative regulation of proteolysis3488317


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TissGeneExp for KNG1

check button Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
gene exp


check button Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01)
gene isoform exp


check button Gene expressions across normal tissues of GTEx data
(GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct)
- Here, we shows the matched tissue types only among our 28 cancer types.
normal gene exp


check button Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
DEG exp

- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05)
Cancer typeMean(exp) in tumorMean(exp) in matched normalLog2FCP-val.FDR
KIRP1.16285456812.48885144-11.325996881.56E-327.00E-30
KIRC1.10954901212.39331568-11.283766675.77E-526.16E-50
KICH5.18063406812.62610207-7.4454681.79E-111.62E-10
LIHC13.7563780714.93886007-1.1824820.0007330.002060751
COAD0.4696612992.723965145-2.2543038464.83E-050.000189312


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TissGene-miRNA for KNG1

check button Significantly anti-correlated miRNAs of TissGene across 28 cancer types
(Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016)
(TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21)
(TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16)
(Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25))
Cancer typemiRNA idmiRNA accessionP-val.Coeff.# samples


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TissGeneMut for KNG1
TissGeneSNV for KNG1

check button nsSNV counts per each loci.
Different colors of circles represent different cancer types. Circle size denotes number of samples.
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)

* Click on the image to enlarge it in a new window.
SNV lollipop
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check button Somatic nucleotide variants of TissGene across 28 cancer types
(X-axis: cancer type and Y-axis: % of mutated samples)
The numbers in parentheses are numbers of samples with mutation (nsSNVs).
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)
SNV distribution

- nsSNVs sorted by frequency.
AAchangeCancer type# samples
p.R392QSKCM2
p.L568FCOAD1
p.Q139KBLCA1
p.K315NREAD1
p.G227VLUAD1
p.S623TLUAD1
p.R184WPAAD1
p.E434KSKCM1
p.G518VLUSC1
p.W519*STAD1
p.R417WOV1
p.S604LHNSC1
p.Q53HLUSC1
p.G411CUCEC1
p.C264FLUSC1
p.D584NKIRC1
p.D350NLUAD1
p.S599LSKCM1
p.R58LLUSC1
p.C370FTHYM1
p.R58HTHYM1
p.Q53RUCEC1
p.D32YKIRP1
p.K31NHNSC1
p.G192*LUSC1
p.S561FBLCA1
p.D638NUCEC1
p.D155NLGG1
p.G502DKIRC1
p.S386LSKCM1
p.E466KSKCM1
p.D567NSKCM1
p.E132KHNSC1
p.N210KSTAD1
p.T557IBRCA1
p.T326ASTAD1
p.I591NLIHC1
p.S377LSKCM1
p.A36TSKCM1
p.A418EHNSC1
p.W222*UCEC1
p.E540*UCEC1
p.D236NBLCA1
p.A313SLUAD1
p.P547TLUAD1
p.Q139RBLCA1
p.G616ESKCM1
p.S243PSTAD1
p.R196QSKCM1
p.T532IUCEC1
p.W587XSKCM1
p.G597CUCEC1
p.I576VLIHC1
p.D638NUCS1
p.R417WUCEC1
p.E529KBLCA1
p.M631ISKCM1
p.G458RSKCM1
p.G81WLUAD1
p.A36DUCEC1
p.D236NSKCM1
p.N205TKIRP1
p.E434XCOAD1
p.S175FSKCM1
p.V490ASTAD1
p.R617CACC1
p.S577LHNSC1
p.E279*HNSC1
p.D565NBRCA1
p.T110ILUSC1
p.N626SLUAD1
p.R196QLGG1
p.E80VSKCM1
p.G424EGBM1
p.G597SLIHC1
p.E132DTHYM1
p.G460CKIRP1
p.R240QSTAD1
p.D302YLUSC1
p.R58HUCEC1
p.I301TBRCA1
p.C328RSTAD1
p.E543KLGG1
p.S153NUCEC1
p.E20KSKCM1
p.W587*SKCM1
p.R240QUCEC1
p.R240QCOAD1
p.S275NSTAD1
p.W360*SKCM1
p.R449HSTAD1
p.E132KLUSC1
p.Q564KLUAD1
p.S275NUCEC1
p.Q124HLUSC1
p.L193FCOAD1
p.P627SSKCM1
p.R427CSKCM1
p.T532ICOAD1
p.E395KSKCM1
p.E419KSKCM1
p.S604LSKCM1


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TissGeneCNV for KNG1

check button Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples)
(TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16)
CNV


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TissGeneFusions for KNG1

check button Fusion genes including TissGene
(ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01)
DatabaseSrcCancer typeSampleFusion geneORF5'-gene BP3'-gene BP
Chimerdb3.0ChiTaRsNAAU120291WDR74-KNG1chr11:62609281chr3:186435141
Chimerdb3.0ChiTaRsNADA640348KNG1-ALBchr3:186435462chr4:74270004
Chimerdb3.0TopHat-FusionCHOLTCGA-W5-AA2X-11AKNG1-ALB3'UTR-CDSchr3:186461677chr4:74279250
TCGAfusionPortalPRADALUADTCGA-55-6972-01AST6GAL1-KNG1Out-of-frameChr3:186761098Chr3:186461494


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TissGeneNet for KNG1

check button Co-expressed gene networks based on protein-protein interaction data (CePIN)
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(PINA2 ppi data)
BRCA (tumor)BRCA (normal)
KNG1, COPS6, CTSL1, GP1BA, KRT1, APP, THBS1, PITX3, PLG, MEP1A, HNF1A, F2, CAPN2, ITGB2, VTN, CAPN1, AGT, F11, CTSG, CTSS, KLKB1 (tumor)KNG1, COPS6, HNF4A, CTSL1, APP, ELANE, THBS1, PLG, MEP1A, HNF1A, F2, ITGB2, FTL, VTN, HABP2, CAPN1, AGT, CD93, F11, CPN1, KLKB1 (normal)
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COAD (tumor)COAD (normal)
KNG1, COPS6, HNF4A, KRT1, APP, MEP1A, HNF1A, CAPN2, ITGB2, VTN, CAPN1, AGT, CD93, F11, CTSG, PLAUR, CTSK, CPN1, CTSS, RXFP4, KLK1 (tumor)KNG1, COPS6, HNF4A, CTSL1, PITX3, PLG, MEP1A, HNF1A, F2, CAPN2, ITGB2, FTL, HABP2, AGT, CD93, F11, PLAUR, CPN1, CTSS, RXFP4, KLK1 (normal)
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HNSC (tumor)HNSC (normal)
KNG1, COPS6, HNF4A, CTSL1, GP1BA, KRT1, ELANE, PITX3, PLG, MEP1A, F2, CAPN2, ITGB2, VTN, HABP2, PREP, F11, CTSG, CTSK, CPN1, KLKB1 (tumor)KNG1, HNF4A, APP, THBS1, PLG, MEP1A, HNF1A, F2, CAPN2, FTL, VTN, HABP2, CAPN1, AGT, F11, PLAUR, CTSK, CPN1, RXFP4, KLK1, KLKB1 (normal)
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KICH (tumor)KICH (normal)
KNG1, COPS6, CTSL1, KRT1, APP, ELANE, THBS1, PLG, MEP1A, CAPN2, ITGB2, HABP2, AGT, CD93, F11, CTSG, PLAUR, CTSK, CTSS, RXFP4, KLK1 (tumor)KNG1, COPS6, CTSL1, GP1BA, APP, ELANE, PITX3, MEP1A, HNF1A, F2, FTL, VTN, HABP2, AGT, PREP, F11, CTSG, CTSK, CPN1, RXFP4, KLK1 (normal)
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KIRC (tumor)KIRC (normal)
KNG1, COPS6, CTSL1, GP1BA, THBS1, PITX3, PLG, MEP1A, F2, CAPN2, ITGB2, HABP2, AGT, CD93, F11, CTSG, PLAUR, CTSK, CTSS, RXFP4, KLK1 (tumor)KNG1, COPS6, THBS1, PITX3, PLG, F2, CAPN2, ITGB2, FTL, VTN, HABP2, CAPN1, CD93, PREP, F11, PLAUR, CTSK, CPN1, CTSS, RXFP4, KLK1 (normal)
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KIRP (tumor)KIRP (normal)
KNG1, CTSL1, KRT1, APP, ELANE, THBS1, PITX3, HNF1A, CAPN2, ITGB2, VTN, HABP2, AGT, F11, CTSG, PLAUR, CTSK, CPN1, CTSS, RXFP4, KLKB1 (tumor)KNG1, COPS6, HNF4A, THBS1, PITX3, PLG, HNF1A, F2, CAPN2, FTL, VTN, HABP2, CAPN1, AGT, CD93, PREP, F11, CTSK, CPN1, CTSS, KLK1 (normal)
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LIHC (tumor)LIHC (normal)
KNG1, COPS6, HNF4A, ELANE, THBS1, PITX3, PLG, HNF1A, F2, CAPN2, ITGB2, FTL, VTN, HABP2, AGT, CD93, F11, PLAUR, CTSK, CPN1, KLKB1 (tumor)KNG1, HNF4A, APP, THBS1, PITX3, PLG, HNF1A, F2, CAPN2, ITGB2, VTN, HABP2, CAPN1, AGT, F11, PLAUR, CTSK, CPN1, RXFP4, KLK1, KLKB1 (normal)
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LUAD (tumor)LUAD (normal)
KNG1, COPS6, CTSL1, KRT1, ELANE, PITX3, PLG, MEP1A, F2, CAPN2, ITGB2, FTL, VTN, HABP2, AGT, CD93, F11, PLAUR, CTSK, CTSS, RXFP4 (tumor)KNG1, HNF4A, CTSL1, APP, THBS1, PITX3, PLG, MEP1A, HNF1A, F2, CAPN2, ITGB2, FTL, VTN, CAPN1, PREP, F11, CTSK, CPN1, KLK1, KLKB1 (normal)
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LUSC (tumor)LUSC (normal)
KNG1, KRT1, APP, THBS1, PITX3, PLG, MEP1A, HNF1A, F2, ITGB2, FTL, VTN, HABP2, CAPN1, F11, CTSG, PLAUR, CPN1, CTSS, RXFP4, KLK1 (tumor)KNG1, HNF4A, CTSL1, APP, PLG, MEP1A, HNF1A, F2, CAPN2, FTL, VTN, HABP2, CAPN1, AGT, CD93, F11, PLAUR, CPN1, RXFP4, KLK1, KLKB1 (normal)
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PRAD (tumor)PRAD (normal)
KNG1, CTSL1, GP1BA, KRT1, APP, PITX3, PLG, HNF1A, F2, ITGB2, VTN, HABP2, CAPN1, AGT, CD93, PREP, F11, CTSK, CTSS, RXFP4, KLK1 (tumor)KNG1, COPS6, HNF4A, CTSL1, APP, ELANE, PLG, MEP1A, HNF1A, F2, FTL, VTN, HABP2, CAPN1, AGT, CD93, PREP, F11, CTSG, PLAUR, CPN1 (normal)
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STAD (tumor)STAD (normal)
KNG1, CTSL1, GP1BA, KRT1, APP, ELANE, PITX3, MEP1A, HNF1A, F2, CAPN2, FTL, VTN, CAPN1, AGT, CD93, PREP, F11, CPN1, RXFP4, KLKB1 (tumor)KNG1, COPS6, HNF4A, KRT1, ELANE, PITX3, PLG, MEP1A, HNF1A, F2, CAPN2, ITGB2, FTL, VTN, HABP2, CAPN1, AGT, F11, CPN1, CTSS, RXFP4 (normal)
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THCA (tumor)THCA (normal)
KNG1, COPS6, HNF4A, KRT1, APP, ELANE, PLG, HNF1A, F2, ITGB2, FTL, HABP2, CD93, PREP, F11, CTSG, PLAUR, CTSS, RXFP4, KLK1, KLKB1 (tumor)KNG1, COPS6, HNF4A, CTSL1, THBS1, PLG, HNF1A, F2, CAPN2, ITGB2, VTN, HABP2, AGT, PREP, F11, PLAUR, CTSK, CPN1, CTSS, KLK1, KLKB1 (normal)
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TissGeneProg for KNG1

check button Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image to enlarge it in a new window.
survival 1

check button Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 2

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 3

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 4

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TissGeneClin for KNG1
TissGeneDrug for KNG1

check button Drug information targeting TissGene
(DrugBank Version 5.0.6, 2017-04-01)
DrugBank IDDrug nameDrug activityDrug typeDrug status


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TissGeneDisease for KNG1

check button Disease information associated with TissGene
(DisGeNet, 2016-06-01)
Disease IDDisease name# pubmedsSource
umls:C0019243Angioedemas, Hereditary31BeFree,CTD_human
umls:C0020538Hypertensive disease14BeFree,GAD,LHGDN
umls:C0020429Hyperalgesia12BeFree,CTD_human
umls:C0007222Cardiovascular Diseases9BeFree,GAD
umls:C0085580Essential Hypertension9BeFree
umls:C0010200Coughing8BeFree,CTD_human
umls:C0020649Hypotension8CTD_human
umls:C0004096Asthma7BeFree
umls:C0030193Pain6BeFree,CTD_human
umls:C0018802Congestive heart failure5BeFree
umls:C0010068Coronary heart disease4BeFree
umls:C0018801Heart failure4BeFree
umls:C2931758Acquired angioedema4BeFree,CTD_human
umls:C0006118Brain Neoplasms3BeFree
umls:C0006142Malignant neoplasm of breast3BeFree
umls:C0011849Diabetes Mellitus3BeFree
umls:C0011860Diabetes Mellitus, Non-Insulin-Dependent3BeFree
umls:C0011881Diabetic Nephropathy3BeFree,GAD
umls:C0017638Glioma3BeFree
umls:C0022658Kidney Diseases3BeFree
umls:C0022661Kidney Failure, Chronic3BeFree
umls:C0028754Obesity3BeFree
umls:C0149721Left Ventricular Hypertrophy3BeFree
umls:C0272340High molecular weight kininogen deficiency3BeFree,CLINVAR,CTD_human,ORPHANET
umls:C0678222Breast Carcinoma3BeFree
umls:C1168401Squamous cell carcinoma of the head and neck3BeFree
umls:C1956346Coronary Artery Disease3BeFree,GAD
umls:C0002395Alzheimer's Disease2BeFree
umls:C0011609Drug Eruptions2CTD_human
umls:C0011847Diabetes2BeFree
umls:C0021368Inflammation2LHGDN
umls:C0027055Myocardial Reperfusion Injury2CTD_human
umls:C0027819Neuroblastoma2BeFree
umls:C0035078Kidney Failure2BeFree
umls:C0152171Idiopathic pulmonary hypertension2BeFree
umls:C0700095Central neuroblastoma2BeFree
umls:C2609414Acute kidney injury2CTD_human
umls:C0002792anaphylaxis1CTD_human
umls:C0003811Cardiac Arrhythmia1CTD_human
umls:C0003850Arteriosclerosis1BeFree
umls:C0004153Atherosclerosis1BeFree
umls:C0005684Malignant neoplasm of urinary bladder1BeFree
umls:C0009324Ulcerative Colitis1BeFree
umls:C0009402Colorectal Carcinoma1BeFree
umls:C0010054Coronary Arteriosclerosis1BeFree
umls:C0010346Crohn Disease1BeFree
umls:C0013604Edema1CTD_human
umls:C0014175Endometriosis1BeFree
umls:C0015379Extravasation of Diagnostic and Therapeutic Materials1CTD_human
umls:C0019158Hepatitis1BeFree
umls:C0019159Hepatitis A1BeFree
umls:C0020452Hyperemia1CTD_human
umls:C0020517Hypersensitivity1CTD_human
umls:C0021390Inflammatory Bowel Diseases1BeFree
umls:C0023893Liver Cirrhosis, Experimental1CTD_human
umls:C0024117Chronic Obstructive Airway Disease1BeFree
umls:C0024141Lupus Erythematosus, Systemic1BeFree
umls:C0024667Animal Mammary Neoplasms1CTD_human
umls:C0027051Myocardial Infarction1BeFree
umls:C0029925Ovarian Carcinoma1BeFree
umls:C0032285Pneumonia1BeFree
umls:C0032584polyps1BeFree
umls:C0033578Prostatic Neoplasms1BeFree
umls:C0036211Sarcoma 1801BeFree
umls:C0040053Thrombosis1GAD
umls:C0040336Tobacco Use Disorder1GAD
umls:C0041234Chagas Disease1BeFree
umls:C0086942Rous Sarcoma1BeFree
umls:C0150055Chronic pain1BeFree
umls:C0151744Myocardial Ischemia1BeFree
umls:C0178879Urinary tract obstruction1BeFree
umls:C0220650Metastatic malignant neoplasm to brain1BeFree
umls:C0221232Welts1BeFree
umls:C0242379Malignant neoplasm of lung1BeFree
umls:C0242994Hantavirus Infections1BeFree
umls:C0243026Sepsis1LHGDN
umls:C0264408Childhood asthma1BeFree
umls:C0265099Basilar artery thrombosis1BeFree
umls:C0333240Acute edema1BeFree
umls:C0349637Common acute lymphoblastic leukemia1BeFree
umls:C0375023Respiratory syncytial virus (RSV) infection in conditions classified elsewhere and of unspecified site1BeFree
umls:C0375024Hantavirus infection in conditions classified elsewhere and of unspecified site1BeFree
umls:C0406317Chronic small plaque psoriasis1BeFree
umls:C0428977Bradycardia1CTD_human
umls:C0524910Hepatitis C, Chronic1BeFree
umls:C0549473Thyroid carcinoma1BeFree
umls:C0677886Epithelial ovarian cancer1BeFree
umls:C0684249Carcinoma of lung1BeFree
umls:C0699885Carcinoma of bladder1BeFree
umls:C0741923cardiac event1BeFree
umls:C0850803Anaphylaxis (non medication)1BeFree
umls:C0852077Blood Coagulation Disorders, Inherited1GAD
umls:C0878544Cardiomyopathies1GAD
umls:C0920646Renal ischaemia1BeFree
umls:C0993582Arthritis, Experimental1RGD
umls:C1140680Malignant neoplasm of ovary1BeFree
umls:C1304177Idiopathic angioedema1BeFree
umls:C1384514Conn Syndrome1BeFree
umls:C1449563Cardiomyopathy, Familial Idiopathic1BeFree
umls:C1519666Tumor-Associated Vasculature1BeFree
umls:C1519670Tumor Angiogenesis1BeFree
umls:C1527249Colorectal Cancer1BeFree
umls:C1559271Non-Malignant Ascites Adverse Event1BeFree
umls:C1857728Hereditary Angioedema Type III1BeFree
umls:C2607914Allergic rhinitis (disorder)1BeFree
umls:C2973725Pulmonary arterial hypertension1BeFree
umls:C3714636Pneumonitis1BeFree
umls:C3714844Pulmonary Hypertension, Primary, 1, With Hereditary Hemorrhagic Telangiectasia1BeFree
umls:C1856719Kininogen Deficiency, Total0CLINVAR