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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory

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TissGeneSummary

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TissGeneExp

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TissGene-miRNA

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TissGeneMut: TissGeneSNV, TissGeneCNV, and TissGeneFusions

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TissGeneNet

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TissGeneProg

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TissGeneClin: TissGeneDrug and TissGeneDisease

TissGeneSummary for LRP2
check button Gene summary
Basic gene informationGene symbolLRP2
Gene namelow density lipoprotein receptor-related protein 2
SynonymsDBS|GP330
CytomapUCSC genome browser: 2q31.1
Type of geneprotein-coding
RefGenesNM_004525.2,
DescriptionHeymann nephritis antigen homologLRP-2calcium sensor proteinglycoprotein 330low-density lipoprotein receptor-related protein 2megalin
Modification date20141219
dbXrefs MIM : 600073
HGNC : HGNC
Ensembl : ENSG00000081479
HPRD : 02509
Vega : OTTHUMG00000132179
ProteinUniProt:
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_LRP2
BioGPS: 4036
PathwayNCI Pathway Interaction Database: LRP2
KEGG: LRP2
REACTOME: LRP2
Pathway Commons: LRP2
ContextiHOP: LRP2
ligand binding site mutation search in PubMed: LRP2
UCL Cancer Institute: LRP2
Assigned class in TissGDB*C
Included tissue-specific gene expression resourcesTiGER,GTEx
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx)KidneyThyroid gland
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA)KIRC,KIRP,KICHTHCA
Reference showing the relevant tissue of LRP2
Description by TissGene annotationsCancer gene
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C.

check button Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO termPubMed ID


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TissGeneExp for LRP2

check button Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
gene exp


check button Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01)
gene isoform exp


check button Gene expressions across normal tissues of GTEx data
(GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct)
- Here, we shows the matched tissue types only among our 28 cancer types.
normal gene exp


check button Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
DEG exp

- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05)
Cancer typeMean(exp) in tumorMean(exp) in matched normalLog2FCP-val.FDR
LUAD1.0574398143.238726021-2.1812862071.55E-086.75E-08
KICH-3.3768820484.607993952-7.9848761.49E-164.50E-15
THCA4.317354636.682290224-2.3649355932.54E-153.41E-14
LUSC-0.9839134993.340429639-4.3243431371.88E-151.23E-14
KIRC7.1628639526.1517222861.0111416670.007570.012989564
LIHC-3.359982048-1.796942048-1.563045.84E-050.000213333


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TissGene-miRNA for LRP2

check button Significantly anti-correlated miRNAs of TissGene across 28 cancer types
(Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016)
(TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21)
(TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16)
(Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25))
Cancer typemiRNA idmiRNA accessionP-val.Coeff.# samples


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TissGeneMut for LRP2
TissGeneSNV for LRP2

check button nsSNV counts per each loci.
Different colors of circles represent different cancer types. Circle size denotes number of samples.
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)

* Click on the image to enlarge it in a new window.
SNV lollipop
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check button Somatic nucleotide variants of TissGene across 28 cancer types
(X-axis: cancer type and Y-axis: % of mutated samples)
The numbers in parentheses are numbers of samples with mutation (nsSNVs).
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)
SNV distribution

- nsSNVs sorted by frequency.
AAchangeCancer type# samples
p.R34CSKCM4
p.R1311CSKCM3
p.R2432IUCEC3
p.R1412WCOAD2
p.S3392FSKCM2
p.G3965ESKCM2
p.R4127HCOAD2
p.R3551CSTAD2
p.E3932KBLCA2
p.R1953*SKCM2
p.P3923LSKCM2
p.S1108FSKCM2
p.A4611VUCEC2
p.R3192WSTAD2
p.M4039ILUAD2
p.E4372KSKCM2
p.E2785KSKCM2
p.R1292WUCEC2
p.R2699QSKCM2
p.G4107ESKCM2
p.R2614IUCEC2
p.R2182HSTAD2
p.A516VLUSC2
p.R2095QSKCM2
p.E3996KSKCM2
p.P3925SSKCM2
p.C1404YUCEC1
p.R2148WUCEC1
p.E393KREAD1
p.P4054SSKCM1
p.G3058VLUAD1
p.C1230RSTAD1
p.G136ALUAD1
p.D1786HBRCA1
p.M1004ICHOL1
p.E2814DUCEC1
p.R4117HREAD1
p.S3357TSTAD1
p.S465FCESC1
p.S1070LUCEC1
p.H3919QCESC1
p.R4063QSKCM1
p.G193EHNSC1
p.E1981QESCA1
p.G4026RSKCM1
p.Y572SSKCM1
p.F4225LLIHC1
p.V584LHNSC1
p.T4308MDLBC1
p.P3186TLUSC1
p.N3887KBRCA1
p.R2095QSARC1
p.R570HGBM1
p.C4389XCOAD1
p.V3050ISTAD1
p.G1891ELGG1
p.S2018YTHYM1
p.S1138CLUAD1
p.P3856SSKCM1
p.G3504VUCEC1
p.T4182ILUSC1
p.K3008NLUAD1
p.G2539ESKCM1
p.P980SSKCM1
p.L2580PKICH1
p.N826KSTAD1
p.A2123VCOAD1
p.D1653YREAD1
p.C1713XACC1
p.N1144SSKCM1
p.R951QUCEC1
p.R34LLUAD1
p.T2284ISKCM1
p.H1362YSKCM1
p.R3895CUCEC1
p.E4472KSKCM1
p.R2148WHNSC1
p.L3326HSTAD1
p.D2765GHNSC1
p.P1368SSKCM1
p.R702HSTAD1
p.E323QBLCA1
p.E3395GOV1
p.G2362EREAD1
p.L2398FESCA1
p.R3791WESCA1
p.E1944*LUSC1
p.P3608LSKCM1
p.D2256NHNSC1
p.D4548VSTAD1
p.N682IOV1
p.R2175WCOAD1
p.P916LGBM1
p.S3514ICOAD1
p.F1225LBLCA1
p.Q1718*STAD1
p.P4380LSKCM1
p.M4384IUCEC1
p.P4208HSARC1
p.T1204IHNSC1
p.E1020KSKCM1
p.R1206HUCEC1
p.N471TSTAD1
p.E3089KBRCA1
p.K4550RKIRC1
p.T3969ALIHC1
p.H32RKIRC1
p.Q4540HBRCA1
p.G1799CKIRC1
p.S2498FUCS1
p.D575HCESC1
p.I1597SSKCM1
p.E1024KHNSC1
p.R2272CSKCM1
p.R4243QBRCA1
p.E2733KSKCM1
p.W166*SKCM1
p.Q162EBLCA1
p.R3206HESCA1
p.E4564QHNSC1
p.F2372SSKCM1
p.R4220LLUAD1
p.D3105NUCEC1
p.R2126TBLCA1
p.I4371VLUAD1
p.P4059LLUSC1
p.T1649PUCEC1
p.I4375SKIRP1
p.A2151SSARC1
p.R4065PBLCA1
p.R1663SHNSC1
p.T2420ALIHC1
p.S3664LUCEC1
p.E4522QHNSC1
p.R1841IUCS1
p.D3052YLUSC1
p.D1255YLUAD1
p.E4545KSKCM1
p.R3726HUCEC1
p.D1879ESKCM1
p.V1048LLUSC1
p.G4292ESKCM1
p.A57VCOAD1
p.S106RKIRC1
p.S4503LBRCA1
p.N3894KOV1
p.C3678RLUSC1
p.G3486ESKCM1
p.N1340DSTAD1
p.D4160HBLCA1
p.M1563ISKCM1
p.R2796HUCS1
p.G3225EBRCA1
p.F2541VESCA1
p.E2886VPRAD1
p.H264YLIHC1
p.D1744NUCEC1
p.G327ALUAD1
p.D2850HBLCA1
p.G1137ELUAD1
p.Y4175SBRCA1
p.Q2986*SKCM1
p.S2423FSKCM1
p.R198CHNSC1
p.R2838STHYM1
p.G1334DSTAD1
p.L1063HLGG1
p.D246EUCEC1
p.D3911YUCEC1
p.G4229CGBM1
p.M2422LLUSC1
p.N3644DLGG1
p.T3929SLUAD1
p.K537ELUAD1
p.V1957LHNSC1
p.I2799NLUAD1
p.P4620SSKCM1
p.R4065*SKCM1
p.K4534TUCEC1
p.I2640TDLBC1
p.C62FLUSC1
p.Y3332*LUSC1
p.P1561LLGG1
p.R3551HLGG1
p.V1655LLUSC1
p.G251VUCEC1
p.H1362NESCA1
p.P1339TLGG1
p.L2363FLUAD1
p.E3544KSKCM1
p.P293TUCEC1
p.E3024KBLCA1
p.Q976*SKCM1
p.P4614SLUAD1
p.R3043CCOAD1
p.D3059EESCA1
p.S2023RSARC1
p.S4618LSKCM1
p.A3344TPAAD1
p.G4574ESKCM1
p.L1044FSKCM1
p.G2238SLIHC1
p.S4627LESCA1
p.W2206CHNSC1
p.K1911ESTAD1
p.W2923CHNSC1
p.M2552ISTAD1
p.C2033YCOAD1
p.Q75HBLCA1
p.E2922KHNSC1
p.P723LSKCM1
p.H3400RSTAD1
p.M1588KLUAD1
p.Y638SSTAD1
p.A837VPAAD1
p.R819CLGG1
p.L1557PSARC1
p.E2562DHNSC1
p.S3274NSTAD1
p.R4585QGBM1
p.R1160*STAD1
p.A1265VSKCM1
p.R3043HESCA1
p.E3669KSKCM1
p.E194GSKCM1
p.D3580HLUAD1
p.Y3858HPRAD1
p.E2266*STAD1
p.E4255QCOAD1
p.G1061CLUAD1
p.L4171PESCA1
p.E1764DUCEC1
p.C2835SSTAD1
p.P1081SSKCM1
p.R2432KSKCM1
p.S2395POV1
p.G1370ESKCM1
p.R1089HLGG1
p.L4196ILUAD1
p.R3498HSTAD1
p.G1252ESKCM1
p.D2425GUCEC1
p.G2362ESKCM1
p.C103SSKCM1
p.S1314CLUAD1
p.R3498HUCEC1
p.V1701MCOAD1
p.G2769ALIHC1
p.C3784RBRCA1
p.C4334YTHYM1
p.R932SSTAD1
p.S576YUCEC1
p.F3133LUCS1
p.A4086DLUAD1
p.C3538SLUAD1
p.S2452YUCEC1
p.P3942SUCEC1
p.S2447FSKCM1
p.H678RHNSC1
p.V4141LHNSC1
p.H1217YSKCM1
p.R3641QSTAD1
p.P4054LSKCM1
p.R3086HUCEC1
p.G745RBRCA1
p.G561VLUAD1
p.E1978DLUSC1
p.P1376SSKCM1
p.A3675TKIRP1
p.A1903TLIHC1
p.R3138LSTAD1
p.C1086RSTAD1
p.R3014WPAAD1
p.P3160SUCEC1
p.E2984DBLCA1
p.C4032RLUAD1
p.V2839IBLCA1
p.I1777MCESC1
p.D3792NBLCA1
p.S962*HNSC1
p.T1976NLUSC1
p.I2834VLUSC1
p.R1643WGBM1
p.E1463KUCEC1
p.C1067FESCA1
p.D3105NSKCM1
p.A1287TCOAD1
p.K1124NUCEC1
p.V2506ISARC1
p.S4070*CESC1
p.A3327DLUAD1
p.E176KSKCM1
p.E3848XESCA1
p.Y4526*KIRC1
p.N2055ICOAD1
p.V2506ICOAD1
p.V240DSARC1
p.L2297STHYM1
p.R2074KSKCM1
p.F3517LREAD1
p.L3221FLUAD1
p.A4646TLUSC1
p.R2125HHNSC1
p.G4404CESCA1
p.M2026ISKCM1
p.E3996KUCEC1
p.R1521HLGG1
p.A541TCOAD1
p.R570CSTAD1
p.L1868IREAD1
p.R3343CUCEC1
p.I3454TBLCA1
p.Q4085*SKCM1
p.Y4552CUCEC1
p.P3323LHNSC1
p.I808NSKCM1
p.R34HCOAD1
p.C3883YLUSC1
p.R4165CGBM1
p.A1967EOV1
p.R3498HCOAD1
p.I1641_spliceLUSC1
p.N508DSKCM1
p.R4127HSARC1
p.S3274NSARC1
p.Y2763CBLCA1
p.R3775QSKCM1
p.R1663CSKCM1
p.Q237*BLCA1
p.T1188IUCEC1
p.C3057WLUAD1
p.K2214NCESC1
p.R2875HESCA1
p.E4076AKIRC1
p.E4306KLUSC1
p.L3209FCESC1
p.R3757LLUAD1
p.G1556RSKCM1
p.S2042COV1
p.K2718RLIHC1
p.E187QBLCA1
p.A1705TUCEC1
p.C3732YSTAD1
p.S2742*LUSC1
p.R2095*STAD1
p.S737LREAD1
p.V4168MLUAD1
p.E1919KSKCM1
p.D1298NSKCM1
p.G1629ESKCM1
p.D1807NUCEC1
p.S4040NSTAD1
p.E2995KSKCM1
p.S1352NUCEC1
p.K796NUCEC1
p.E776*UCEC1
p.N2590IBLCA1
p.T1103NLUAD1
p.N2024KLGG1
p.D1392HHNSC1
p.I4210LCOAD1
p.R2574KBLCA1
p.I3251NSKCM1
p.R2796CUCS1
p.L504FSKCM1
p.R1089CSTAD1
p.R4127HHNSC1
p.L3588FSKCM1
p.E776DCOAD1
p.E1234KBRCA1
p.C1213GLIHC1
p.H2011DBLCA1
p.R4319XUCS1
p.S962LSKCM1
p.R3641WREAD1
p.E4226KCOAD1
p.D2975NSKCM1
p.E4293QLIHC1
p.A2595SCESC1
p.R2212IBRCA1
p.D3907VTHCA1
p.E3716VSARC1
p.C3137SLUAD1
p.D681YHNSC1
p.E3598KSKCM1
p.L1737FBLCA1
p.A3830DUCEC1
p.R278QUCEC1
p.I3464TSTAD1
p.R702CCOAD1
p.R3086CSTAD1
p.E2656*KIRC1
p.Q383HHNSC1
p.R4065*BLCA1
p.S4053YCOAD1
p.A3826VSTAD1
p.P2837SSKCM1
p.R2542CSKCM1
p.P2896LUCEC1
p.E176DLUAD1
p.C3642YUCEC1
p.M733ILUAD1
p.N339IKIRC1
p.R368HUCEC1
p.R1479CESCA1
p.Q4336HHNSC1
p.C103FSKCM1
p.S830LCOAD1
p.Q320KLUAD1
p.N1132SKIRC1
p.P1306ASKCM1
p.S2492FCESC1
p.G2927DSKCM1
p.I3202MCOAD1
p.P992SCESC1
p.F3847LPAAD1
p.C3671FLUAD1
p.A779TESCA1
p.S1548GLGG1
p.W1288XSKCM1
p.G514ESKCM1
p.R2752*STAD1
p.V2183ACESC1
p.R2479IUCEC1
p.P2002SSKCM1
p.G2466VLUAD1
p.I1446MUCS1
p.E3492GSKCM1
p.M1622ISKCM1
p.R1589HCOAD1
p.R1085CCOAD1
p.S1695LLUSC1
p.S546NTHYM1
p.T728NLGG1
p.D1163NSKCM1
p.G597RSKCM1
p.C2842RHNSC1
p.S3673RLUSC1
p.E3544QLUAD1
p.G3353RSKCM1
p.R2202GLUAD1
p.W476*UCEC1
p.A3344TDLBC1
p.R1610GLUSC1
p.G3713SSKCM1
p.D2242NSKCM1
p.E3063DUCEC1
p.A1647VSKCM1
p.R829WESCA1
p.G3302RSKCM1
p.L3547FSKCM1
p.R3043HOV1
p.Y3841CUCS1
p.Y3334*LGG1
p.R1500GLUSC1
p.R4106QSTAD1
p.R2500HSKCM1
p.L2004MBLCA1
p.E1534*BLCA1
p.D2622GSTAD1
p.S4627LSKCM1
p.S1707FSKCM1
p.L4284SSKCM1
p.G2351CHNSC1
p.G874DUCEC1
p.R3736CSKCM1
p.M2493IBLCA1
p.C3114YUCEC1
p.A3344TUCEC1
p.A3412DOV1
p.S1414TESCA1
p.D2973GLIHC1
p.C1601SLUAD1
p.E3252QHNSC1
p.P333LSKCM1
p.R2752QHNSC1
p.P4018LSKCM1
p.P2878LSKCM1
p.N463SKIRC1
p.C2906YTHYM1
p.K480XKIRP1
p.R951QCOAD1
p.E1014KLIHC1
p.P3882SCESC1
p.Q4085XSKCM1
p.K3147RLUSC1
p.P3451QSTAD1
p.T2188ASKCM1
p.G3060RLUSC1
p.R402LBLCA1
p.G738RBLCA1
p.E2984KLUAD1
p.Y2763CLIHC1
p.Y3174FLUAD1
p.Y3421NSKCM1
p.R3184PHNSC1
p.G3563SLIHC1
p.A2393VSKCM1
p.R3736CHNSC1
p.D1218NSKCM1
p.R501WSTAD1
p.E2656XKIRC1
p.G4026ESKCM1
p.R2542CUCEC1
p.N2641DBRCA1
p.Q3804KREAD1
p.T1877SSKCM1
p.P1339TLUAD1
p.L2297FBLCA1
p.L960SUCEC1
p.Y482CLIHC1
p.G2232CHNSC1
p.S2218YUCEC1
p.K480*KIRP1
p.G774ESKCM1
p.L2572_spliceLUSC1
p.E4211KKIRP1
p.Y2520CUCEC1
p.S3664*LUSC1
p.G4490ACESC1
p.L2228FSTAD1
p.G2623RBRCA1
p.R3888CUCEC1
p.Q3034HBLCA1
p.R402QUCEC1
p.R2875CUCEC1
p.R577WCOAD1
p.S2400RSARC1
p.A3382VSTAD1
p.G4015ESKCM1
p.R883QSTAD1
p.W1084LLUAD1
p.S3709NUCEC1
p.W1964CLUAD1
p.V595DTHYM1
p.E2814KSKCM1
p.H3069LLIHC1
p.L2174MUCEC1
p.A4646TESCA1
p.P519RSKCM1
p.V4436IUCS1
p.P3773SSKCM1
p.D3724NSKCM1
p.G4146ESKCM1
p.R2617LBRCA1
p.T1224ISTAD1
p.D246NSKCM1
p.S97LSTAD1
p.R4046QUVM1
p.N4023HUCEC1
p.G3905DSKCM1
p.S1138FDLBC1
p.D4263HHNSC1
p.G3661ALUAD1
p.C3519GOV1
p.E3751DUCEC1
p.R3210KUCEC1
p.R819CGBM1
p.F2435LCHOL1
p.T2284ADLBC1
p.Q162ELUAD1
p.G1875SSKCM1
p.D4150YBLCA1
p.G4217RSKCM1
p.D3116EHNSC1
p.W2970CLUAD1
p.R3554QUCEC1
p.Q2413KLUAD1
p.E895*LUAD1
p.D1301NBLCA1
p.G49EUCEC1
p.V717LLUSC1
p.R1501TLUAD1
p.L4130PGBM1
p.R2013HCOAD1
p.D1049NMESO1
p.R4065QSKCM1
p.A3574DSKCM1
p.R1643QUCEC1
p.L4454PTHCA1
p.S3357FBLCA1
p.E4251DUCEC1
p.E4472GSKCM1
p.S2549NPRAD1
p.V4435IBLCA1
p.R679ICOAD1
p.A2044TCESC1
p.D1053VKIRC1
p.A3520TCOAD1
p.W1288*SKCM1
p.E3584KHNSC1
p.E582QLUAD1
p.C2806RKIRP1
p.R2095*GBM1
p.H3455RUCEC1
p.C1143FLIHC1
p.R1633IUCEC1
p.E3967*UCEC1
p.E194KREAD1
p.R3890WLGG1
p.W2970LKIRC1
p.Q421HUCEC1
p.R4585QUCEC1
p.R3736CREAD1
p.L2185FSKCM1
p.I515LKIRC1
p.R4127CGBM1
p.R3765QSKCM1
p.G4301ESKCM1
p.S84CBLCA1
p.R3192QLUSC1
p.R2875CESCA1
p.P4187TLUAD1
p.D2515YLUAD1
p.Y2601HOV1
p.R577QSARC1
p.T1859ILUAD1
p.R2617QLGG1
p.R2272CLUSC1
p.R4319*UCS1
p.T1544ALGG1
p.N2407SBRCA1
p.G259RCOAD1
p.D3377NSKCM1
p.E2937KGBM1
p.N3937DLUSC1
p.E3996KBLCA1
p.K2299NCOAD1
p.E2231KHNSC1
p.S123CCESC1
p.G510ALUAD1
p.L2134VCESC1
p.L1619FGBM1
p.T554ACOAD1
p.S1145XESCA1
p.K1445TLGG1
p.V2248IBRCA1
p.W3956CBLCA1
p.R2419IUCEC1
p.Q912LLUAD1
p.R490CSTAD1
p.E2716QUCEC1
p.G2728VSTAD1
p.H596YCESC1
p.H1851QSKCM1
p.R2262HHNSC1
p.A541EBRCA1
p.S97TLUSC1
p.E1344QBLCA1
p.R2964KSKCM1
p.R1412QTGCT1
p.D2609EDLBC1
p.H3385YREAD1
p.C1713*ACC1
p.G1758RSTAD1
p.S3813GGBM1
p.C2848YHNSC1
p.R2796HSTAD1
p.L2360VBLCA1
p.W166XSKCM1
p.H1076NLUAD1
p.E4207KSKCM1
p.C208YUCEC1
p.R2095XCOAD1
p.H1920QESCA1
p.F1192LHNSC1
p.I4337VSARC1
p.E582KSKCM1
p.L1913IREAD1
p.A4443VLUAD1
p.A3382ECOAD1
p.R2056WSKCM1
p.D2190HBLCA1
p.C1101FLUAD1
p.G1209SHNSC1
p.G2210RLUAD1
p.R4243*MESO1
p.S1190YUCEC1
p.R1037ILUAD1
p.F3558LSTAD1
p.T1938SBLCA1
p.D135GKIRC1
p.D1572YLUAD1
p.G4051CSTAD1
p.D2950NSKCM1
p.F4000ISKCM1
p.R2759LLIHC1
p.D1474NSKCM1
p.G2639ESKCM1
p.K73TLGG1
p.E2079KSKCM1
p.Q1959KESCA1
p.A2872TCOAD1
p.R2875SUCEC1
p.R2752XSTAD1
p.N2659KHNSC1
p.G3325EUCEC1
p.S1070LSTAD1
p.I1831FCOAD1
p.Q1718XSTAD1
p.L4056FBRCA1
p.G3819VLGG1
p.R1311LCOAD1
p.C3771RKIRC1
p.P3527LSKCM1
p.V4535MSKCM1
p.S737LDLBC1
p.R2505CPRAD1
p.E3976KUCEC1
p.F2435YLUSC1
p.R2838HPCPG1
p.E3976QLUAD1
p.S4403GLUAD1
p.D1056NUCEC1
p.R4127HLUSC1
p.R4319*SKCM1
p.Y1836CBRCA1
p.I1749TKIRP1
p.D3023NUCEC1
p.D3880HLUSC1
p.R1311HSTAD1
p.R344CGBM1
p.D4088NSKCM1
p.R3290CLGG1
p.R490HUCS1
p.L798IREAD1
p.P122SSKCM1
p.H369YSKCM1
p.I2258LUCS1
p.A3602TBRCA1
p.D3710NSKCM1
p.R1581QPAAD1
p.P2361LLUAD1
p.P3734LSKCM1
p.R2505HLGG1
p.R365QSKCM1
p.R4319XCOAD1
p.V484LBRCA1
p.D1301NCESC1
p.F2541VSKCM1
p.Y336SCOAD1
p.C152YCOAD1
p.E3848*ESCA1
p.W355LPRAD1
p.G3042ESKCM1
p.A2440TSKCM1
p.F3133SBLCA1
p.G606ALUAD1
p.F4074LSTAD1
p.G2602DCESC1
p.H3078DCESC1
p.S1165WBRCA1
p.E2533DLUSC1
p.R3498CSTAD1
p.L1913IUCEC1
p.G3042RGBM1
p.S856NUCEC1
p.P4420LSKCM1
p.S4559FLUAD1
p.D2983NESCA1
p.E4604GKIRC1
p.R3551HCOAD1
p.G1061DSTAD1
p.Q4323*SKCM1
p.E3761KLUAD1
p.S174LLUSC1
p.D1987ABRCA1
p.A4413VREAD1
p.S1961FLUAD1
p.R847HUCEC1
p.E2731VTHYM1
p.L861PSKCM1
p.N339KLUAD1
p.Y2160CLUAD1
p.K2214NLUAD1
p.E4290KSKCM1
p.R2577CGBM1
p.G2210WLUAD1
p.E784KSKCM1
p.N159SSKCM1
p.G1465CLUAD1
p.D3146ASKCM1
p.N4327SLUAD1
p.P3568SSKCM1
p.R3184*BLCA1
p.V477FSKCM1
p.G3910VUCEC1
p.D2256ELUAD1
p.R2990SBLCA1
p.V263IOV1
p.R4063*UCEC1
p.D403NLUSC1


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TissGeneCNV for LRP2

check button Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples)
(TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16)
CNV


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TissGeneFusions for LRP2

check button Fusion genes including TissGene
(ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01)
DatabaseSrcCancer typeSampleFusion geneORF5'-gene BP3'-gene BP
Chimerdb3.0ChiTaRsNACV324821LRP2-PAPPAchr2:169983795chr9:118988097
Chimerdb3.0ChiTaRsNABQ369809PAPPA-LRP2chr9:118988381chr2:169983691
TCGAfusionPortalPRADALUADTCGA-64-5779-01APOFUT2-LRP2Out-of-frameChr21:46707656Chr2:170151220


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TissGeneNet for LRP2

check button Co-expressed gene networks based on protein-protein interaction data (CePIN)
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(PINA2 ppi data)
BRCA (tumor)BRCA (normal)
LRP2, CTNNB1, DLG2, DLG4, ITGB1BP1, ALB, NOS1AP, CBX5, MAPK8IP2, ANKRA2, TLN1, ANKS1B, LCN2, RBP1, APBA2, MDK, DLG3, LPL, LRP2BP, LDLRAP1, CUBN (tumor)LRP2, MAGI1, GIPC1, APOE, DLG4, ITGB1BP1, PLAU, NOS1AP, MAPK8IP1, MAPK8IP2, GPRASP1, DAB1, ANKRA2, APBB1, ANKS1B, LCN2, APBA2, CLU, LRP2BP, SYNJ2BP, SCN3A (normal)
bullet pointbullet point
COAD (tumor)COAD (normal)
LRP2, MAGI1, CTNNB1, DLG2, DLG4, ITGB1BP1, PLAU, THBS1, ALB, SLC9A3, ABL1, GC, SNX17, LPA, APBB1, ANKS1B, APBA2, DLG3, LPL, ANAPC10, TG (tumor)LRP2, APOE, DLG2, DLG4, SERPINE1, THBS1, APOB, MAPK8IP1, MAPK8IP2, GPRASP1, APBB1, TLN1, INS, ANKS1B, RBP1, DLG3, LPL, CLU, CUBN, SCGB1A1, SCN3A (normal)
bullet pointbullet point
HNSC (tumor)HNSC (normal)
LRP2, MAGI1, ITGB1BP1, SERPINE1, NOS1AP, LRPAP1, CBX5, MAPK8IP1, MAPK8IP2, TTR, GPRASP1, LPA, DAB1, ANKRA2, ANKS1B, PIP5K1C, DLG3, LRP2BP, LDLRAP1, TG, SCGB1A1 (tumor)LRP2, ATN1, GIPC1, SERPINE1, PLAU, NOS1AP, MAPK8IP1, GPRASP1, LPA, DAB1, APBB1, ANKS1B, APBA2, MDK, DLG3, LPL, CLU, LRP2BP, LDLRAP1, CUBN, TG (normal)
bullet pointbullet point
KICH (tumor)KICH (normal)
LRP2, GIPC1, APOE, DLG2, DLG4, ITGB1BP1, PLAU, ALB, SLC9A3, DAB2, APOB, MAPK8IP2, LPA, APBB1, DLG3, CLU, LRP2BP, LDLRAP1, APOH, CUBN, TG (tumor)LRP2, APOE, DLG2, DLG4, ITGB1BP1, SLC9A3, ABL1, DAB2, GC, NOS1AP, APOB, SNX17, GPRASP1, LPA, RBP1, LPL, CLU, APOH, TG, SYNJ2BP, SCN3A (normal)
bullet pointbullet point
KIRC (tumor)KIRC (normal)
LRP2, GIPC1, APOE, DLG2, DLG4, ITGB1BP1, PLAU, ALB, ABL1, DAB2, GC, CBX5, MAPK8IP2, LPA, ANKS1B, DLG3, CLU, LDLRAP1, APOH, CUBN, TG (tumor)LRP2, ATN1, GIPC1, ITGB1BP1, THBS1, SLC9A3, DAB2, GC, NOS1AP, APOB, MAPK8IP1, TTR, ANKS1B, LCN2, RBP1, MDK, LPL, CLU, LDLRAP1, CUBN, SCN3A (normal)
bullet pointbullet point
KIRP (tumor)KIRP (normal)
LRP2, GIPC1, APOE, CTNNB1, DLG2, DLG4, ITGB1BP1, PLAU, ALB, DAB2, GC, APOB, LPA, ANKS1B, DLG3, LRP2BP, LDLRAP1, APOH, CUBN, TG, SCN3A (tumor)LRP2, ATN1, GIPC1, APOE, DLG4, SLC9A3, DAB2, NOS1AP, APOB, CBX5, MAPK8IP1, SNX17, DLG1, APBB1, RBP1, PIP5K1C, LDLRAP1, APOH, CUBN, SYNJ2BP, SCN3A (normal)
bullet pointbullet point
LIHC (tumor)LIHC (normal)
LRP2, MAGI1, GIPC1, APOE, SERPINE1, ABL1, NOS1AP, LRPAP1, APOB, CBX5, MAPK8IP2, LPA, DLG1, RBP1, APBA2, MDK, DLG3, LPL, LRP2BP, APOH, SYNJ2BP (tumor)LRP2, CTNNB1, ITGB1BP1, PLAU, THBS1, DAB2, CBX5, MAPK8IP1, TTR, GPRASP1, LPA, ANKRA2, LCN2, RBP1, PIP5K1C, APBA2, MDK, LRP2BP, LDLRAP1, TG, SCN3A (normal)
bullet pointbullet point
LUAD (tumor)LUAD (normal)
LRP2, MAGI1, ATN1, GIPC1, ITGB1BP1, ABL1, GC, NOS1AP, CBX5, SNX17, ANKRA2, TLN1, RBP1, MDK, DLG3, CLU, LRP2BP, LDLRAP1, APOH, ANAPC10, SCGB1A1 (tumor)LRP2, MAGI1, GIPC1, ITGB1BP1, SERPINE1, PLAU, NOS1AP, CBX5, GPRASP1, APBB1, TLN1, ANKS1B, RBP1, DLG3, LPL, CLU, LRP2BP, APOH, SYNJ2BP, SCGB1A1, SCN3A (normal)
bullet pointbullet point
LUSC (tumor)LUSC (normal)
LRP2, DLG4, ITGB1BP1, SERPINE1, SLC9A3, DAB2, GC, NOS1AP, CBX5, MAPK8IP2, GPRASP1, APBB1, RBP1, PIP5K1C, APBA2, MDK, DLG3, CUBN, ANAPC10, TG, SCGB1A1 (tumor)LRP2, MAGI1, GIPC1, APOE, DLG2, ITGB1BP1, PLAU, THBS1, SLC9A3, DAB2, LRPAP1, APOB, APBB1, TLN1, ANKS1B, LPL, CLU, LRP2BP, APOH, SCGB1A1, SCN3A (normal)
bullet pointbullet point
PRAD (tumor)PRAD (normal)
LRP2, MAGI1, ATN1, DLG2, ITGB1BP1, PLAU, SLC9A3, GC, NOS1AP, MAPK8IP1, SNX17, TTR, GPRASP1, LPA, APBA2, MDK, LPL, LRP2BP, CUBN, TG, SYNJ2BP (tumor)LRP2, MAGI1, CTNNB1, DLG4, PLAU, THBS1, DAB2, NOS1AP, APOB, GPRASP1, LPA, APBB1, TLN1, LCN2, RBP1, APBA2, CLU, CUBN, TG, SCGB1A1, SCN3A (normal)
bullet pointbullet point
STAD (tumor)STAD (normal)
LRP2, APOE, CTNNB1, PLAU, ALB, DAB2, GC, APOB, SNX17, MAPK8IP2, LPA, DLG1, ANKRA2, TLN1, INS, LCN2, MDK, CLU, ANAPC10, TG, SCN3A (tumor)LRP2, CTNNB1, ITGB1BP1, ALB, APOB, CBX5, MAPK8IP1, MAPK8IP2, TTR, LPA, DAB1, ANKRA2, APBB1, RBP1, PIP5K1C, DLG3, APOH, CUBN, TG, SCGB1A1, SCN3A (normal)
bullet pointbullet point
THCA (tumor)THCA (normal)
LRP2, MAGI1, ATN1, APOE, CTNNB1, DLG2, ITGB1BP1, ABL1, CBX5, SNX17, GPRASP1, DLG1, ANKRA2, TLN1, ANKS1B, MDK, LRP2BP, LDLRAP1, CUBN, TG, SYNJ2BP (tumor)LRP2, MAGI1, GIPC1, APOE, DLG2, DLG4, ITGB1BP1, PLAU, ABL1, MAPK8IP1, GPRASP1, DLG1, ANKS1B, LCN2, RBP1, MDK, CLU, LDLRAP1, TG, SYNJ2BP, SCN3A (normal)
bullet pointbullet point


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TissGeneProg for LRP2

check button Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image to enlarge it in a new window.
survival 1

check button Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 2

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 3

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 4

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TissGeneClin for LRP2
TissGeneDrug for LRP2

check button Drug information targeting TissGene
(DrugBank Version 5.0.6, 2017-04-01)
DrugBank IDDrug nameDrug activityDrug typeDrug status
DB00071Insulin PorkBiotechApproved
DB00030Insulin HumanBiotechApproved|Investigational
DB00013UrokinaseBiotechApproved|Investigational|Withdrawn
DB00798GentamicinOther/unknownSmall moleculeApproved|Vet_approved


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TissGeneDisease for LRP2

check button Disease information associated with TissGene
(DisGeNet, 2016-06-01)
Disease IDDisease name# pubmedsSource
umls:C0019693HIV Infections9BeFree
umls:C1704378Heymann Nephritis7BeFree
umls:C0015230Exanthema5BeFree
umls:C0848332Spots on skin5BeFree
umls:C0017665Membranous glomerulonephritis4BeFree,RGD
umls:C1857277Donnai-Barrow syndrome4BeFree,CLINVAR,CTD_human,MGD,ORPHANET,UNIPROT
umls:C0013421Dystonia3BeFree
umls:C0393593Dystonia Disorders3BeFree
umls:C0002395Alzheimer's Disease2GAD
umls:C0005940Bone Diseases2BeFree
umls:C0013384Dyskinetic syndrome2BeFree
umls:C0018784Sensorineural Hearing Loss (disorder)2BeFree,CTD_human
umls:C0019284Diaphragmatic Hernia2BeFree,CTD_human
umls:C0022661Kidney Failure, Chronic2BeFree,RGD
umls:C0033578Prostatic Neoplasms2CTD_human,LHGDN
umls:C0155552Hearing Loss, Mixed Conductive-Sensorineural2BeFree
umls:C0242422Parkinsonian Disorders2BeFree
umls:C0262587Parathyroid Adenoma2BeFree
umls:C0878681Dent's disease2BeFree
umls:C0000768Congenital Abnormality1BeFree
umls:C0001925Albuminuria1RGD
umls:C0001973Alcoholic Intoxication, Chronic1GAD
umls:C0003125Anorexia Nervosa1GAD
umls:C0003873Rheumatoid Arthritis1LHGDN
umls:C0004364Autoimmune Diseases1BeFree
umls:C0005944Metabolic Bone Disorder1CTD_human
umls:C0006142Malignant neoplasm of breast1BeFree
umls:C0007134Renal Cell Carcinoma1BeFree
umls:C0008073Developmental Disabilities1CTD_human
umls:C0010823Cytomegalovirus Infections1BeFree
umls:C0011853Diabetes Mellitus, Experimental1RGD
umls:C0015398Eye Diseases, Hereditary1CTD_human
umls:C0015624Fanconi Syndrome1BeFree
umls:C0015625Fanconi Anemia1BeFree
umls:C0020438Hypercalciuria1BeFree
umls:C0020443Hypercholesterolemia1GAD
umls:C0020473Hyperlipidemia1GAD
umls:C0020538Hypertensive disease1RGD
umls:C0022658Kidney Diseases1CTD_human
umls:C0022660Kidney Failure, Acute1BeFree
umls:C0022665Kidney Neoplasm1BeFree
umls:C0025202melanoma1BeFree
umls:C0025521Inborn Errors of Metabolism1BeFree
umls:C0027709Nephrocalcinosis1BeFree
umls:C0027720Nephrosis1RGD
umls:C0027819Neuroblastoma1BeFree
umls:C0027960Nevus1BeFree
umls:C0027962Melanocytic nevus1BeFree
umls:C0028754Obesity1BeFree
umls:C0029442Osteomalacia1BeFree
umls:C0034951Refractive Errors1BeFree
umls:C0035579Rickets1BeFree
umls:C0040128Thyroid Diseases1LHGDN
umls:C0040336Tobacco Use Disorder1GAD
umls:C0040822Tremor1BeFree
umls:C0042749Viremia1BeFree
umls:C0042847Vitamin B 12 Deficiency1BeFree
umls:C0042870Vitamin D Deficiency1BeFree,CTD_human
umls:C0079541Holoprosencephaly1BeFree
umls:C0085413Polycystic Kidney, Autosomal Dominant1RGD
umls:C0158945Congenital cytomegalovirus infection1BeFree
umls:C0175754Agenesis of corpus callosum1BeFree
umls:C0235974Pancreatic carcinoma1BeFree
umls:C0236848Age-related cognitive decline1BeFree
umls:C0265253Stickler syndrome (disorder)1BeFree
umls:C0266617Congenital anomaly of face1BeFree
umls:C0268731Renal glomerular disease1BeFree
umls:C0271183Severe myopia1BeFree
umls:C0279530Malignant Bone Neoplasm1BeFree
umls:C0281267bilateral breast cancer1BeFree
umls:C0333463Senile Plaques1BeFree
umls:C0338656Impaired cognition1BeFree
umls:C0342790Carnitine palmitoyl transferase 2 deficiency1BeFree
umls:C0346647Malignant neoplasm of pancreas1BeFree
umls:C0376358Malignant neoplasm of prostate1BeFree,GAD
umls:C0376634Craniofacial Abnormalities1CTD_human
umls:C0445118Nephrotic range proteinuria1BeFree
umls:C0456844Light chain myeloma1BeFree
umls:C0497552Congenital neurologic anomalies1LHGDN
umls:C0524620Metabolic Syndrome X1BeFree
umls:C0585442Osteosarcoma of bone1BeFree
umls:C0600139Prostate carcinoma1BeFree
umls:C0678222Breast Carcinoma1BeFree
umls:C0700095Central neuroblastoma1BeFree
umls:C0752207Familial Dystonia1BeFree
umls:C1271104Blood pressure finding1GWASCAT
umls:C1272641Systemic arterial pressure1GWASCAT
umls:C1275808Congenital central hypoventilation1BeFree
umls:C1392786Cognitive changes1BeFree
umls:C1456781Benign melanocytic nevus1BeFree
umls:C1848954Generalized dystonia1BeFree
umls:C1857395De Toni-Debre-Fanconi Syndrome1BeFree
umls:C2936349Plaque, Amyloid1BeFree
umls:C3665593Melanocytic nevus of skin1BeFree