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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory

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TissGeneSummary

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TissGeneExp

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TissGene-miRNA

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TissGeneMut: TissGeneSNV, TissGeneCNV, and TissGeneFusions

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TissGeneNet

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TissGeneProg

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TissGeneClin: TissGeneDrug and TissGeneDisease

TissGeneSummary for KLK14
check button Gene summary
Basic gene informationGene symbolKLK14
Gene namekallikrein-related peptidase 14
SynonymsKLK-L6
CytomapUCSC genome browser: 19q13.3-q13.4
Type of geneprotein-coding
RefGenesNM_022046.4,
DescriptionhK14kallikrein 14kallikrein-14kallikrein-like protein 6
Modification date20141207
dbXrefs MIM : 606135
HGNC : HGNC
Ensembl : ENSG00000129437
HPRD : 05844
Vega : OTTHUMG00000143721
ProteinUniProt:
go to UniProt's Cross Reference DB Table
ExpressionCleanEX: HS_KLK14
BioGPS: 43847
PathwayNCI Pathway Interaction Database: KLK14
KEGG: KLK14
REACTOME: KLK14
Pathway Commons: KLK14
ContextiHOP: KLK14
ligand binding site mutation search in PubMed: KLK14
UCL Cancer Institute: KLK14
Assigned class in TissGDB*C
Included tissue-specific gene expression resourcesHPA,GTEx
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx)Skin
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA)SKCM
Reference showing the relevant tissue of KLK14
Description by TissGene annotations
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C.

check button Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez
GO IDGO termPubMed ID
GO:0006508proteolysis15654974
GO:0009566fertilization18482984
GO:0045744negative regulation of G-protein coupled receptor protein signaling pathway16885167
GO:0045745positive regulation of G-protein coupled receptor protein signaling pathway16885167
GO:0048730epidermis morphogenesis17158887
GO:0070684seminal clot liquefaction18482984
GO:0006508proteolysis15654974
GO:0009566fertilization18482984
GO:0045744negative regulation of G-protein coupled receptor protein signaling pathway16885167
GO:0045745positive regulation of G-protein coupled receptor protein signaling pathway16885167
GO:0048730epidermis morphogenesis17158887
GO:0070684seminal clot liquefaction18482984


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TissGeneExp for KLK14

check button Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
gene exp


check button Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01)
gene isoform exp


check button Gene expressions across normal tissues of GTEx data
(GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct)
- Here, we shows the matched tissue types only among our 28 cancer types.
normal gene exp


check button Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1))
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
DEG exp

- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05)
Cancer typeMean(exp) in tumorMean(exp) in matched normalLog2FCP-val.FDR
BRCA-1.895373897-0.587748458-1.3076254395.77E-061.45E-05
LUAD-2.399984907-1.37601939-1.0239655170.00850.015338294


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TissGene-miRNA for KLK14

check button Significantly anti-correlated miRNAs of TissGene across 28 cancer types
(Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016)
(TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21)
(TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16)
(Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25))
Cancer typemiRNA idmiRNA accessionP-val.Coeff.# samples


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TissGeneMut for KLK14
TissGeneSNV for KLK14

check button nsSNV counts per each loci.
Different colors of circles represent different cancer types. Circle size denotes number of samples.
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)

* Click on the image to enlarge it in a new window.
SNV lollipop
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check button Somatic nucleotide variants of TissGene across 28 cancer types
(X-axis: cancer type and Y-axis: % of mutated samples)
The numbers in parentheses are numbers of samples with mutation (nsSNVs).
(TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25)
SNV distribution

- nsSNVs sorted by frequency.
AAchangeCancer type# samples
p.Q33RPCPG2
p.R64HLGG2
p.D125NSKCM1
p.V249ILUAD1
p.R265WTHYM1
p.R112HGBM1
p.I171NKIRC1
p.N39DBRCA1
p.R160XPRAD1
p.A28VSKCM1
p.L19IPRAD1
p.R64HTHCA1
p.Q90*SKCM1
p.T263MUCEC1
p.D219GKIRP1
p.S169RSTAD1
p.T115RSKCM1
p.R112STGCT1
p.R112CSKCM1
p.A176TUCEC1
p.S220CBRCA1
p.Y174SLIHC1
p.H45YSKCM1
p.S215CBLCA1
p.P145LSKCM1
p.Q25HKIRC1
p.T200MPAAD1
p.R122QSKCM1
p.A23TESCA1
p.H45YPCPG1
p.R160*PRAD1
p.Q210HLUAD1
p.V204ABLCA1
p.R112HBLCA1
p.H45YCOAD1
p.G221WBLCA1
p.L3QLUAD1
p.D219GSKCM1


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TissGeneCNV for KLK14

check button Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples)
(TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16)
CNV


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TissGeneFusions for KLK14

check button Fusion genes including TissGene
(ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01)
DatabaseSrcCancer typeSampleFusion geneORF5'-gene BP3'-gene BP


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TissGeneNet for KLK14

check button Co-expressed gene networks based on protein-protein interaction data (CePIN)
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(PINA2 ppi data)


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TissGeneProg for KLK14

check button Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image to enlarge it in a new window.
survival 1

check button Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 2

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 3

check button Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types
(TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16)
(TCGA clinicalMatrix, phenotype data, version 2016-04-27)

* Click on the image enlarge it in a new window.
survival 4

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TissGeneClin for KLK14
TissGeneDrug for KLK14

check button Drug information targeting TissGene
(DrugBank Version 5.0.6, 2017-04-01)
DrugBank IDDrug nameDrug activityDrug typeDrug status


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TissGeneDisease for KLK14

check button Disease information associated with TissGene
(DisGeNet, 2016-06-01)
Disease IDDisease name# pubmedsSource
umls:C0006142Malignant neoplasm of breast7BeFree
umls:C0029925Ovarian Carcinoma6BeFree
umls:C0678222Breast Carcinoma6BeFree
umls:C1140680Malignant neoplasm of ovary6BeFree
umls:C0376358Malignant neoplasm of prostate5BeFree,GAD
umls:C0600139Prostate carcinoma4BeFree
umls:C0007102Malignant tumor of colon3BeFree
umls:C0033578Prostatic Neoplasms3LHGDN
umls:C0699790Colon Carcinoma2BeFree
umls:C1458155Mammary Neoplasms2BeFree,LHGDN
umls:C0001418Adenocarcinoma1LHGDN
umls:C0001430Adenoma1BeFree
umls:C0007112Adenocarcinoma of prostate1BeFree
umls:C0007131Non-Small Cell Lung Carcinoma1BeFree
umls:C0033860Psoriasis1BeFree
umls:C0039590Testicular Neoplasms1BeFree
umls:C0338106Adenocarcinoma of colon1BeFree
umls:C0596263Carcinogenesis1BeFree
umls:C0971858Arthritis, Collagen-Induced1BeFree