![]() |
TissGeneSummary for MYB |
![]() |
Basic gene information | Gene symbol | MYB |
Gene name | v-myb avian myeloblastosis viral oncogene homolog | |
Synonyms | Cmyb|c-myb|c-myb_CDS|efg | |
Cytomap | UCSC genome browser: 6q22-q23 | |
Type of gene | protein-coding | |
RefGenes | NM_001130172.1, NM_001130173.1,NM_001161656.1,NM_001161657.1,NM_001161658.1, NM_001161659.1,NM_001161660.1,NM_005375.2, | |
Description | c-myb protein (140 AA)c-myb10A_CDSc-myb13A_CDSc-myb14A_CDSc-myb8B_CDSproto-oncogene c-Mybtranscriptional activator Myb | |
Modification date | 20141207 | |
dbXrefs | MIM : 189990 | |
HGNC : HGNC | ||
Ensembl : ENSG00000118513 | ||
HPRD : 01810 | ||
Vega : OTTHUMG00000015629 | ||
Protein | UniProt: go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_MYB | |
BioGPS: 4602 | ||
Pathway | NCI Pathway Interaction Database: MYB | |
KEGG: MYB | ||
REACTOME: MYB | ||
Pathway Commons: MYB | ||
Context | iHOP: MYB | |
ligand binding site mutation search in PubMed: MYB | ||
UCL Cancer Institute: MYB | ||
Assigned class in TissGDB* | C | |
Included tissue-specific gene expression resources | TiGER,GTEx | |
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx) | BreastBone marrowTestis | |
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA) | BRCALAMLTGCT | |
Reference showing the relevant tissue of MYB | ||
Description by TissGene annotations | Protective TissGene in OS Cancer gene |
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C. |
![]() |
GO ID | GO term | PubMed ID | GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 10233885 | GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 10233885 |
Top |
TissGeneExp for MYB |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
![]() |
![]() (TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01) |
![]() |
![]() (GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct) - Here, we shows the matched tissue types only among our 28 cancer types. |
![]() |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
![]() |
- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05) |
Cancer type | Mean(exp) in tumor | Mean(exp) in matched normal | Log2FC | P-val. | FDR |
BRCA | 3.31509089 | 1.903223346 | 1.411867544 | 3.50E-07 | 9.95E-07 |
STAD | 1.746338204 | -0.883855546 | 2.63019375 | 4.24E-06 | 5.54E-05 |
KIRC | -4.040267005 | -5.703736449 | 1.663469444 | 2.88E-12 | 1.19E-11 |
PRAD | 0.535964405 | -0.49777021 | 1.033734615 | 1.24E-07 | 1.14E-06 |
HNSC | -1.679517392 | -0.572017392 | -1.1075 | 0.00411 | 0.011388547 |
ESCA | 1.359711783 | -2.055679126 | 3.415390909 | 0.000109 | 0.00341431 |
KIRP | -4.427789921 | -5.780811796 | 1.353021875 | 8.98E-05 | 0.000310086 |
BLCA | -0.283270514 | -2.229128408 | 1.945857895 | 1.86E-05 | 0.000306418 |
Top |
TissGene-miRNA for MYB |
![]() (Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016) (TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21) (TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16) (Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25)) |
Cancer type | miRNA id | miRNA accession | P-val. | Coeff. | # samples |
Top |
TissGeneMut for MYB |
TissGeneSNV for MYB |
![]() Different colors of circles represent different cancer types. Circle size denotes number of samples. (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) * Click on the image to enlarge it in a new window. |
![]() |
![]() |
![]() (X-axis: cancer type and Y-axis: % of mutated samples) The numbers in parentheses are numbers of samples with mutation (nsSNVs). (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) |
![]() |
- nsSNVs sorted by frequency. |
AAchange | Cancer type | # samples |
p.P31S | SKCM | 1 |
p.R380K | SKCM | 1 |
p.H24Y | LUAD | 1 |
p.A264E | SARC | 1 |
p.V478A | STAD | 1 |
p.V503G | SKCM | 1 |
p.T346I | SKCM | 1 |
p.Q392R | READ | 1 |
p.F412C | SKCM | 1 |
p.P476Q | PAAD | 1 |
p.G39A | LUSC | 1 |
p.S744F | BLCA | 1 |
p.G28V | COAD | 1 |
p.V103A | BRCA | 1 |
p.L456F | CESC | 1 |
p.H283N | LIHC | 1 |
p.A343S | LUSC | 1 |
p.L396P | LIHC | 1 |
p.S257G | UCEC | 1 |
p.F415C | SKCM | 1 |
p.G340E | UCEC | 1 |
p.F591L | HNSC | 1 |
p.E20G | LIHC | 1 |
p.W63X | PRAD | 1 |
p.T381I | SKCM | 1 |
p.P642S | SKCM | 1 |
p.L265F | ESCA | 1 |
p.W43L | LUSC | 1 |
p.S245F | SKCM | 1 |
p.S304A | MESO | 1 |
p.R337G | STAD | 1 |
p.N705I | SKCM | 1 |
p.A719S | UCEC | 1 |
p.S623F | BLCA | 1 |
p.E141Q | BLCA | 1 |
p.G510E | BLCA | 1 |
p.S542F | SKCM | 1 |
p.R191Q | READ | 1 |
p.A170T | READ | 1 |
p.S473I | UCEC | 1 |
p.H135Y | BRCA | 1 |
p.S329N | LIHC | 1 |
p.F411L | COAD | 1 |
p.P379R | READ | 1 |
p.I647S | BLCA | 1 |
p.P731T | LUAD | 1 |
p.S496I | PAAD | 1 |
p.P112L | ESCA | 1 |
p.W147* | BRCA | 1 |
p.P233L | THYM | 1 |
p.S342N | KIRC | 1 |
p.E306K | BRCA | 1 |
p.E437Q | BLCA | 1 |
p.D18A | SKCM | 1 |
p.S257C | LIHC | 1 |
p.D62N | LUAD | 1 |
p.R36C | STAD | 1 |
p.A170T | ESCA | 1 |
p.I269T | STAD | 1 |
p.P262L | GBM | 1 |
p.W63R | UCEC | 1 |
p.L524V | BRCA | 1 |
p.A264V | LGG | 1 |
p.Q740H | ESCA | 1 |
p.G362C | ESCA | 1 |
p.R294* | BLCA | 1 |
p.R586K | SKCM | 1 |
p.G175R | LUSC | 1 |
p.K645N | LUAD | 1 |
p.S521L | SKCM | 1 |
p.T60A | ESCA | 1 |
p.P517L | SKCM | 1 |
p.P610T | LUAD | 1 |
p.P654S | UCEC | 1 |
p.N525K | BRCA | 1 |
p.V503I | DLBC | 1 |
p.L690I | UCEC | 1 |
p.P585L | SKCM | 1 |
p.D618Y | LUSC | 1 |
p.P555L | SKCM | 1 |
p.P233S | SKCM | 1 |
p.N271I | PRAD | 1 |
p.L438M | SKCM | 1 |
p.L644M | SKCM | 1 |
p.G631E | BLCA | 1 |
p.D670N | HNSC | 1 |
p.L467F | HNSC | 1 |
p.L301F | UCEC | 1 |
p.W82R | LAML | 1 |
p.R81Q | HNSC | 1 |
p.E514Q | OV | 1 |
Top |
TissGeneCNV for MYB |
![]() (TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16) |
![]() |
Top |
TissGeneFusions for MYB |
![]() (ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01) |
Database | Src | Cancer type | Sample | Fusion gene | ORF | 5'-gene BP | 3'-gene BP |
Chimerdb3.0 | ChiTaRs | NA | AA807457 | DNAJC1-MYB | chr10:22201941 | chr6:135540168 | |
Chimerdb3.0 | ChiTaRs | NA | BE091998 | ACTG1-MYB | chr17:79479311 | chr6:135513463 | |
Chimerdb3.0 | ChiTaRs | NA | BF332617 | ACTG1-MYB | chr17:79479141 | chr6:135513461 | |
Chimerdb3.0 | ChiTaRs | NA | BE092001 | ACTG1-MYB | chr17:79479306 | chr6:135513463 | |
Chimerdb3.0 | ChiTaRs | adeoid systic carcinoma;benign epithelial tumor | FJ969915 | MYB-NFIB | chr6:135524462 | chr9:14087937 | |
Chimerdb3.0 | FusionScan | BRCA | TCGA-A1-A0SB-01A | MYB-NFIB | In-Frame | chr6:135521553 | chr9:14307519 |
Chimerdb3.0 | TopHat-Fusion | BRCA | TCGA-A1-A0SB-01A | MYB-NFIB | In-Frame | chr6:135521552 | chr9:14307518 |
TCGAfusionPortal | PRADA | BRCA | TCGA-A1-A0SB-01A | HEATR5B-MYB | Out-of-frame | Chr2:37215789 | Chr6:135522777 |
TCGAfusionPortal | PRADA | BRCA | TCGA-A1-A0SB-01A | MYB-NFIB | In-frame | Chr6:135521553 | Chr9:14307519 |
TCGAfusionPortal | PRADA | BRCA | TCGA-A2-A3XS-01A | AHI1-MYB | In-frame | Chr6:135679270 | Chr6:135539002 |
TCGAfusionPortal | PRADA | BRCA | TCGA-EW-A1P3-01A | AIM1-MYB | NA | Chr6:106808956 | Chr6:135513462 |
Top |
TissGeneNet for MYB |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (PINA2 ppi data) |
Top |
TissGeneProg for MYB |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image to enlarge it in a new window. |
![]() |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
![]() |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
![]() |
![]() (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
![]() |
Top |
TissGeneClin for MYB |
TissGeneDrug for MYB |
![]() (DrugBank Version 5.0.6, 2017-04-01) |
DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
TissGeneDisease for MYB |
![]() (DisGeNet, 2016-06-01) |
Disease ID | Disease name | # pubmeds | Source |
umls:C0010606 | Adenoid Cystic Carcinoma | 23 | BeFree,CTD_human |
umls:C0023418 | leukemia | 13 | BeFree,LHGDN |
umls:C0175754 | Agenesis of corpus callosum | 13 | BeFree |
umls:C0006142 | Malignant neoplasm of breast | 11 | BeFree |
umls:C0678222 | Breast Carcinoma | 11 | BeFree |
umls:C0002895 | Anemia, Sickle Cell | 8 | BeFree,GAD |
umls:C0023467 | Leukemia, Myelocytic, Acute | 8 | BeFree |
umls:C0025202 | melanoma | 7 | BeFree |
umls:C1961099 | Precursor T-Cell Lymphoblastic Leukemia-Lymphoma | 7 | BeFree,CTD_human |
umls:C0005283 | beta Thalassemia | 5 | BeFree,GAD |
umls:C0598766 | Leukemogenesis | 5 | BeFree |
umls:C1458155 | Mammary Neoplasms | 5 | BeFree |
umls:C0009375 | Colonic Neoplasms | 4 | BeFree,LHGDN |
umls:C0023473 | Myeloid Leukemia, Chronic | 4 | BeFree |
umls:C0024299 | Lymphoma | 4 | BeFree |
umls:C0027819 | Neuroblastoma | 4 | BeFree |
umls:C0700095 | Central neuroblastoma | 4 | BeFree |
umls:C1527249 | Colorectal Cancer | 4 | BeFree |
umls:C0002312 | alpha-Thalassemia | 3 | BeFree,GAD |
umls:C0004096 | Asthma | 3 | BeFree,CTD_human,GAD |
umls:C0005699 | Blast Phase | 3 | BeFree,LHGDN |
umls:C0007102 | Malignant tumor of colon | 3 | BeFree |
umls:C0009402 | Colorectal Carcinoma | 3 | BeFree |
umls:C0017638 | Glioma | 3 | BeFree,CTD_human |
umls:C0085669 | Acute leukemia | 3 | BeFree |
umls:C0596263 | Carcinogenesis | 3 | BeFree |
umls:C0001815 | Primary Myelofibrosis | 2 | BeFree |
umls:C0018790 | Cardiac Arrest | 2 | BeFree |
umls:C0023449 | Acute lymphocytic leukemia | 2 | BeFree |
umls:C0023470 | Myeloid Leukemia | 2 | BeFree,LHGDN |
umls:C0023492 | Leukemia, T-Cell | 2 | BeFree |
umls:C0023493 | Adult T-Cell Lymphoma/Leukemia | 2 | BeFree |
umls:C0027022 | Myeloproliferative disease | 2 | BeFree,LHGDN |
umls:C0027627 | Neoplasm Metastasis | 2 | BeFree |
umls:C0178874 | Tumor Progression | 2 | BeFree |
umls:C0679427 | myeloblastosis | 2 | BeFree |
umls:C0699790 | Colon Carcinoma | 2 | BeFree |
umls:C1368683 | Epithelioma | 2 | BeFree |
umls:C1456873 | alpha^+^ Thalassemia | 2 | BeFree |
umls:C1961102 | Precursor Cell Lymphoblastic Leukemia Lymphoma | 2 | BeFree,LHGDN |
umls:C0003857 | Congenital arteriovenous malformation | 1 | BeFree |
umls:C0004114 | Astrocytoma | 1 | BeFree |
umls:C0007124 | Noninfiltrating Intraductal Carcinoma | 1 | BeFree |
umls:C0007131 | Non-Small Cell Lung Carcinoma | 1 | BeFree |
umls:C0008626 | Congenital chromosomal disease | 1 | BeFree |
umls:C0010054 | Coronary Arteriosclerosis | 1 | BeFree |
umls:C0010068 | Coronary heart disease | 1 | BeFree |
umls:C0014457 | Eosinophilia | 1 | BeFree |
umls:C0017636 | Glioblastoma | 1 | BeFree |
umls:C0020538 | Hypertensive disease | 1 | GAD |
umls:C0023440 | Acute Erythroblastic Leukemia | 1 | LHGDN |
umls:C0023448 | Lymphoid leukemia | 1 | BeFree |
umls:C0023480 | Leukemia, Myelomonocytic, Chronic | 1 | BeFree |
umls:C0024530 | Malaria | 1 | BeFree |
umls:C0027051 | Myocardial Infarction | 1 | GAD |
umls:C0027430 | Nasal Polyps | 1 | GAD |
umls:C0027962 | Melanocytic nevus | 1 | BeFree |
umls:C0028754 | Obesity | 1 | GAD |
umls:C0030193 | Pain | 1 | GAD |
umls:C0032000 | Pituitary Adenoma | 1 | BeFree |
umls:C0033027 | Preleukemia | 1 | BeFree |
umls:C0036095 | Salivary Gland Neoplasms | 1 | BeFree |
umls:C0036421 | Systemic Scleroderma | 1 | BeFree |
umls:C0037054 | Sickle Cell Trait | 1 | BeFree |
umls:C0039730 | Thalassemia | 1 | GAD |
umls:C0079773 | Lymphoma, T-Cell, Cutaneous | 1 | BeFree |
umls:C0085096 | Peripheral Vascular Diseases | 1 | GAD |
umls:C0085207 | Gestational Diabetes | 1 | BeFree |
umls:C0151779 | Cutaneous Melanoma | 1 | BeFree |
umls:C0155877 | Allergic asthma | 1 | BeFree |
umls:C0206692 | Carcinoma, Lobular | 1 | BeFree |
umls:C0264408 | Childhood asthma | 1 | BeFree |
umls:C0279751 | Adenoid cystic carcinoma of salivary gland | 1 | BeFree |
umls:C0280100 | Solid tumour | 1 | BeFree |
umls:C0334533 | Arteriovenous hemangioma | 1 | BeFree |
umls:C0334583 | Pilocytic Astrocytoma | 1 | BeFree |
umls:C0376544 | Hematopoietic Neoplasms | 1 | BeFree |
umls:C0518014 | Hematocrit level | 1 | GAD |
umls:C0600139 | Prostate carcinoma | 1 | BeFree |
umls:C1176475 | Ductal Carcinoma | 1 | BeFree |
umls:C1261502 | Finding of Mean Corpuscular Hemoglobin | 1 | GAD |
umls:C1266086 | Polymorphous low grade adenocarcinoma | 1 | BeFree |
umls:C1292778 | Chronic myeloproliferative disorder | 1 | BeFree |
umls:C1305968 | Eccrine dermal cylindroma | 1 | BeFree |
umls:C1306759 | Eosinophilic disorder | 1 | BeFree |
umls:C1332167 | Adenoid cystic breast carcinoma | 1 | BeFree |
umls:C1336076 | Sporadic Breast Carcinoma | 1 | BeFree |
umls:C1636667 | Disorder characterized by eosinophilia | 1 | BeFree |
umls:C1956346 | Coronary Artery Disease | 1 | BeFree |
umls:C3463824 | MYELODYSPLASTIC SYNDROME | 1 | BeFree |
umls:C3811653 | Experimental Organism Basal Cell Carcinoma | 1 | BeFree |
umls:C0023437 | Acute Basophilic Leukemia | 0 | ORPHANET |
umls:C0026987 | Myelofibrosis | 0 | MGD |