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| TissGeneSummary for SALL1 |
 Gene summary |
| Basic gene information | Gene symbol | SALL1 |
| Gene name | spalt-like transcription factor 1 | |
| Synonyms | HEL-S-89|HSAL1|Sal-1|TBS|ZNF794 | |
| Cytomap | UCSC genome browser: 16q12.1 | |
| Type of gene | protein-coding | |
| RefGenes | NM_001127892.1, NM_002968.2, | |
| Description | epididymis secretory protein Li 89sal-like protein 1zinc finger protein 794zinc finger protein SALL1zinc finger protein Spalt-1 | |
| Modification date | 20141219 | |
| dbXrefs | MIM : 602218 | |
| HGNC : HGNC | ||
| Ensembl : ENSG00000103449 | ||
| HPRD : 03742 | ||
| Vega : OTTHUMG00000133176 | ||
| Protein | UniProt: go to UniProt's Cross Reference DB Table | |
| Expression | CleanEX: HS_SALL1 | |
| BioGPS: 6299 | ||
| Pathway | NCI Pathway Interaction Database: SALL1 | |
| KEGG: SALL1 | ||
| REACTOME: SALL1 | ||
| Pathway Commons: SALL1 | ||
| Context | iHOP: SALL1 | |
| ligand binding site mutation search in PubMed: SALL1 | ||
| UCL Cancer Institute: SALL1 | ||
| Assigned class in TissGDB* | C | |
| Included tissue-specific gene expression resources | TiGER,GTEx | |
| Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx) | KidneyThyroid gland | |
| Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA) | KIRC,KIRP,KICHTHCA | |
| Reference showing the relevant tissue of SALL1 | ||
| Description by TissGene annotations | Cancer gene Have significant anti-correlated miRNA | |
| * Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C. |
| Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez |
| GO ID | GO term | PubMed ID | GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 16443351 | GO:0030177 | positive regulation of Wnt signaling pathway | 15158448 | GO:0045892 | negative regulation of transcription, DNA-templated | 16443351 | GO:0045893 | positive regulation of transcription, DNA-templated | 15158448 | GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 15158448 | GO:0000122 | negative regulation of transcription from RNA polymerase II promoter | 16443351 | GO:0030177 | positive regulation of Wnt signaling pathway | 15158448 | GO:0045892 | negative regulation of transcription, DNA-templated | 16443351 | GO:0045893 | positive regulation of transcription, DNA-templated | 15158448 | GO:0045944 | positive regulation of transcription from RNA polymerase II promoter | 15158448 |
| Top |
| TissGeneExp for SALL1 |
| Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1)) (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
 |
| Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1)) (TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01) |
 |
| Gene expressions across normal tissues of GTEx data (GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct) - Here, we shows the matched tissue types only among our 28 cancer types. |
 |
| Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1)) (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
 |
| - Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05) |
| Cancer type | Mean(exp) in tumor | Mean(exp) in matched normal | Log2FC | P-val. | FDR |
| LIHC | 3.826998901 | 4.894752901 | -1.067754 | 2.47E-05 | 9.54E-05 |
| KICH | 0.259004901 | 5.245528901 | -4.986524 | 2.12E-07 | 9.11E-07 |
| LUAD | -3.909017513 | -5.597950272 | 1.688932759 | 1.72E-06 | 5.58E-06 |
| LUSC | -2.759659805 | -5.329814707 | 2.570154902 | 3.87E-08 | 1.14E-07 |
| HNSC | -2.154992774 | -3.532885797 | 1.377893023 | 0.00168 | 0.005346535 |
| COAD | -0.725925869 | 0.439651054 | -1.165576923 | 0.000889 | 0.002576454 |
| Top |
| TissGene-miRNA for SALL1 |
| Significantly anti-correlated miRNAs of TissGene across 28 cancer types (Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016) (TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21) (TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16) (Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25)) |
| Cancer type | miRNA id | miRNA accession | P-val. | Coeff. | # samples |
| UCS | hsa-miR-155-5p | MIMAT0000646 | 0.047 | -0.27 | 56 |
| UVM | hsa-miR-212-3p | MIMAT0000269 | 0.0088 | -0.29 | 80 |
| LUAD | hsa-miR-144-3p | MIMAT0000436 | 0.021 | -0.3 | 60 |
| UVM | hsa-miR-155-5p | MIMAT0000646 | 0.0043 | -0.32 | 80 |
| Top |
| TissGeneMut for SALL1 |
| TissGeneSNV for SALL1 |
| nsSNV counts per each loci. Different colors of circles represent different cancer types. Circle size denotes number of samples. (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) * Click on the image to enlarge it in a new window. |
 |
| Somatic nucleotide variants of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of mutated samples) The numbers in parentheses are numbers of samples with mutation (nsSNVs). (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) |
 |
| - nsSNVs sorted by frequency. |
| AAchange | Cancer type | # samples |
| p.S159G | PCPG | 6 |
| p.P578S | SKCM | 5 |
| p.S276L | SKCM | 4 |
| p.P675S | SKCM | 3 |
| p.S287F | SKCM | 3 |
| p.D92N | SKCM | 3 |
| p.E76K | SKCM | 3 |
| p.S190F | SKCM | 3 |
| p.P1133S | SKCM | 2 |
| p.R995W | STAD | 2 |
| p.E151K | SKCM | 2 |
| p.G63S | HNSC | 2 |
| p.G1183E | SKCM | 2 |
| p.R898W | LUAD | 2 |
| p.D703N | LIHC | 2 |
| p.S159G | UVM | 2 |
| p.S373L | SKCM | 2 |
| p.Q692X | SKCM | 2 |
| p.R506K | SKCM | 2 |
| p.R995W | LUAD | 2 |
| p.F818V | READ | 2 |
| p.Q595* | SKCM | 2 |
| p.R329K | SKCM | 2 |
| p.R939C | SKCM | 2 |
| p.S715F | SKCM | 2 |
| p.G160S | UVM | 1 |
| p.E115Q | BRCA | 1 |
| p.G201E | SKCM | 1 |
| p.P78L | SKCM | 1 |
| p.S757L | SKCM | 1 |
| p.G994S | STAD | 1 |
| p.E29K | LUAD | 1 |
| p.S335C | LIHC | 1 |
| p.P645A | STAD | 1 |
| p.E83K | DLBC | 1 |
| p.G1007A | ACC | 1 |
| p.S806F | SKCM | 1 |
| p.V251I | HNSC | 1 |
| p.D1317Y | LGG | 1 |
| p.E116K | SKCM | 1 |
| p.P645S | LUAD | 1 |
| p.T539M | ESCA | 1 |
| p.G161S | COAD | 1 |
| p.P94S | SKCM | 1 |
| p.T572M | COAD | 1 |
| p.I1030M | STAD | 1 |
| p.G217S | STAD | 1 |
| p.P702L | HNSC | 1 |
| p.R1154I | UCEC | 1 |
| p.S801R | LUAD | 1 |
| p.R47Q | ESCA | 1 |
| p.T654S | SKCM | 1 |
| p.R251C | COAD | 1 |
| p.P980L | SKCM | 1 |
| p.G490R | SKCM | 1 |
| p.N484K | ESCA | 1 |
| p.R121K | SKCM | 1 |
| p.K63T | STAD | 1 |
| p.I933M | STAD | 1 |
| p.S418F | SKCM | 1 |
| p.G895V | OV | 1 |
| p.P577H | OV | 1 |
| p.H398Y | SKCM | 1 |
| p.S443N | PRAD | 1 |
| p.H467Y | SKCM | 1 |
| p.E54K | HNSC | 1 |
| p.S570F | ESCA | 1 |
| p.V808E | LUAD | 1 |
| p.E626D | LUAD | 1 |
| p.A32D | LUSC | 1 |
| p.R853K | SKCM | 1 |
| p.A846V | STAD | 1 |
| p.G160S | DLBC | 1 |
| p.L545M | LUAD | 1 |
| p.E599K | BLCA | 1 |
| p.P512S | SKCM | 1 |
| p.S426N | LUAD | 1 |
| p.G643D | LUAD | 1 |
| p.V555A | UCEC | 1 |
| p.S157G | KIRC | 1 |
| p.G459R | LIHC | 1 |
| p.G694D | SKCM | 1 |
| p.D717N | PRAD | 1 |
| p.A35G | LUAD | 1 |
| p.L684M | LUAD | 1 |
| p.F1120V | KIRP | 1 |
| p.R24K | SKCM | 1 |
| p.V1108D | LIHC | 1 |
| p.H19D | LUSC | 1 |
| p.P578A | BLCA | 1 |
| p.T1068N | LUSC | 1 |
| p.P578L | SKCM | 1 |
| p.P1196L | LIHC | 1 |
| p.P664S | SKCM | 1 |
| p.R660G | BLCA | 1 |
| p.N509S | CESC | 1 |
| p.N604S | STAD | 1 |
| p.E377K | SKCM | 1 |
| p.M244I | PRAD | 1 |
| p.E377G | SKCM | 1 |
| p.P490L | SKCM | 1 |
| p.R179Q | BLCA | 1 |
| p.N900D | LIHC | 1 |
| p.S443G | SKCM | 1 |
| p.R741W | UCEC | 1 |
| p.S157R | KIRC | 1 |
| p.E26K | SKCM | 1 |
| p.S903P | BRCA | 1 |
| p.C357Y | PRAD | 1 |
| p.A1149V | ESCA | 1 |
| p.R1216L | LUAD | 1 |
| p.D896N | SKCM | 1 |
| p.T475M | HNSC | 1 |
| p.M28I | SKCM | 1 |
| p.A1246V | ESCA | 1 |
| p.E991K | SKCM | 1 |
| p.P306S | SKCM | 1 |
| p.G393E | SKCM | 1 |
| p.T838R | LUSC | 1 |
| p.S689P | LUAD | 1 |
| p.S164G | COAD | 1 |
| p.G1280E | SKCM | 1 |
| p.P575Q | ESCA | 1 |
| p.R1213C | STAD | 1 |
| p.G65D | LUAD | 1 |
| p.I1005N | KIRC | 1 |
| p.Y923C | SKCM | 1 |
| p.Q69* | SKCM | 1 |
| p.G215V | LUAD | 1 |
| p.D742Y | LUAD | 1 |
| p.R957Q | SKCM | 1 |
| p.D826N | SKCM | 1 |
| p.S69F | LUAD | 1 |
| p.R1031S | BLCA | 1 |
| p.Y511H | STAD | 1 |
| p.V658G | CHOL | 1 |
| p.P675A | BLCA | 1 |
| p.V268I | HNSC | 1 |
| p.G818S | LUAD | 1 |
| p.A854T | LUSC | 1 |
| p.P254S | SKCM | 1 |
| p.R1310C | STAD | 1 |
| p.P931Q | LIHC | 1 |
| p.A304T | ESCA | 1 |
| p.L1080F | LUSC | 1 |
| p.E770K | SKCM | 1 |
| p.Q1159P | ACC | 1 |
| p.L1206I | UCEC | 1 |
| p.P1293L | LIHC | 1 |
| p.E529D | LUAD | 1 |
| p.S300Y | LUAD | 1 |
| p.N803D | LIHC | 1 |
| p.V259L | LUAD | 1 |
| p.C717S | PRAD | 1 |
| p.T636M | ESCA | 1 |
| p.S756F | SKCM | 1 |
| p.K126T | LUAD | 1 |
| p.Q107H | STAD | 1 |
| p.M341I | PRAD | 1 |
| p.L72F | BLCA | 1 |
| p.P91L | SKCM | 1 |
| p.T139I | SKCM | 1 |
| p.S38R | HNSC | 1 |
| p.H145Y | SKCM | 1 |
| p.G63S | THYM | 1 |
| p.R35C | UCEC | 1 |
| p.K989N | LUAD | 1 |
| p.R469H | BRCA | 1 |
| p.S590P | STAD | 1 |
| p.P390S | SKCM | 1 |
| p.E51Q | BLCA | 1 |
| p.P33L | READ | 1 |
| p.P482R | LUAD | 1 |
| p.G298R | STAD | 1 |
| p.S547F | SKCM | 1 |
| p.E528K | SKCM | 1 |
| p.P972A | BLCA | 1 |
| p.D1123N | SKCM | 1 |
| p.G21E | SKCM | 1 |
| p.S186Y | LUSC | 1 |
| p.C65Y | LGG | 1 |
| p.D799N | SKCM | 1 |
| p.E418Q | BLCA | 1 |
| p.A358V | ESCA | 1 |
| p.Q1052X | SKCM | 1 |
| p.P254Q | SARC | 1 |
| p.G1201D | COAD | 1 |
| p.R154C | LUAD | 1 |
| p.N993K | HNSC | 1 |
| p.S321F | SKCM | 1 |
| p.E571K | SKCM | 1 |
| p.G1258D | SKCM | 1 |
| p.S54I | LUAD | 1 |
| p.F1217V | KIRP | 1 |
| p.N387K | ESCA | 1 |
| p.S812F | SKCM | 1 |
| p.R603K | SKCM | 1 |
| p.D831N | STAD | 1 |
| p.G393R | SKCM | 1 |
| p.P1097S | SKCM | 1 |
| p.G910A | ACC | 1 |
| p.C1031Y | PCPG | 1 |
| p.G162D | LUAD | 1 |
| p.I884M | BLCA | 1 |
| p.S61G | TGCT | 1 |
| p.P424S | SKCM | 1 |
| p.S158G | THYM | 1 |
| p.E516K | ESCA | 1 |
| p.D25N | LUAD | 1 |
| p.P1105A | LUAD | 1 |
| p.D421N | LUSC | 1 |
| p.L892F | SKCM | 1 |
| p.T572M | STAD | 1 |
| p.S644F | SKCM | 1 |
| p.P415S | SKCM | 1 |
| p.E476K | SKCM | 1 |
| p.I567M | DLBC | 1 |
| p.P1193L | SKCM | 1 |
| p.L119H | BRCA | 1 |
| p.D729N | SKCM | 1 |
| p.A1074V | UCEC | 1 |
| p.T539A | BLCA | 1 |
| p.L566F | LUSC | 1 |
| p.P799L | HNSC | 1 |
| p.A304T | UCEC | 1 |
| p.L691I | UCEC | 1 |
| p.S61G | THYM | 1 |
| p.G118E | SKCM | 1 |
| p.S592P | LUAD | 1 |
| p.T1182M | ESCA | 1 |
| p.G1209R | LGG | 1 |
| p.A295V | STAD | 1 |
| p.S373F | SKCM | 1 |
| p.H408D | HNSC | 1 |
| p.G890E | SKCM | 1 |
| p.S1205N | BLCA | 1 |
| p.L858F | LIHC | 1 |
| p.S442F | LUAD | 1 |
| p.Q209X | SKCM | 1 |
| p.Y1020C | SKCM | 1 |
| p.P351S | SKCM | 1 |
| p.V129I | PAAD | 1 |
| p.D849Y | UCEC | 1 |
| p.T1050I | UCEC | 1 |
| p.G298E | SKCM | 1 |
| p.P512T | SKCM | 1 |
| p.P501H | LUAD | 1 |
| p.G160S | STAD | 1 |
| p.M28T | LUAD | 1 |
| p.V336A | BLCA | 1 |
| p.L1025P | PRAD | 1 |
| p.S1205G | SKCM | 1 |
| p.P390L | SKCM | 1 |
| p.L451V | HNSC | 1 |
| p.S1302G | SKCM | 1 |
| p.A398T | BRCA | 1 |
| p.V1225L | GBM | 1 |
| p.L127Q | HNSC | 1 |
| p.S854L | SKCM | 1 |
| p.E248K | READ | 1 |
| p.A358G | KIRP | 1 |
| p.F1092C | COAD | 1 |
| p.P415L | SKCM | 1 |
| p.P538S | SKCM | 1 |
| p.T375N | LUAD | 1 |
| p.R179* | LUSC | 1 |
| p.N1184T | ESCA | 1 |
| p.R957Q | UCEC | 1 |
| p.P761S | SKCM | 1 |
| p.A290P | BLCA | 1 |
| p.S276T | LUAD | 1 |
| p.D166Y | BLCA | 1 |
| p.R251C | LUAD | 1 |
| p.S80P | STAD | 1 |
| p.M909I | SKCM | 1 |
| p.V1315M | STAD | 1 |
| p.E83K | READ | 1 |
| p.E248K | SKCM | 1 |
| p.R498C | READ | 1 |
| p.E668K | SKCM | 1 |
| p.P820L | SKCM | 1 |
| p.L282V | SKCM | 1 |
| p.S443R | LUAD | 1 |
| p.A1191E | LUAD | 1 |
| p.V897A | LIHC | 1 |
| p.E1154K | BLCA | 1 |
| p.R1036C | SKCM | 1 |
| p.I73N | LUAD | 1 |
| p.E213K | SKCM | 1 |
| p.G1161D | SKCM | 1 |
| p.G971D | HNSC | 1 |
| p.S864F | BLCA | 1 |
| p.I247F | LUAD | 1 |
| p.A549P | BLCA | 1 |
| p.T679M | PRAD | 1 |
| p.P587H | STAD | 1 |
| p.H370Y | SKCM | 1 |
| p.S861L | UCEC | 1 |
| p.E611D | LUAD | 1 |
| p.C934Y | PCPG | 1 |
| p.R154C | SARC | 1 |
| p.T1279M | STAD | 1 |
| p.M125I | SKCM | 1 |
| p.I150F | LUAD | 1 |
| p.T472N | LUAD | 1 |
| p.S934N | SKCM | 1 |
| p.S181P | LUSC | 1 |
| p.N187K | STAD | 1 |
| p.N777S | STAD | 1 |
| p.T28K | LUAD | 1 |
| p.G492S | SKCM | 1 |
| p.P322S | UCEC | 1 |
| p.C671F | LUAD | 1 |
| p.E474G | SKCM | 1 |
| p.M829I | BRCA | 1 |
| p.M1300I | SKCM | 1 |
| p.P538T | BLCA | 1 |
| p.D800G | COAD | 1 |
| p.G589D | STAD | 1 |
| p.P478Q | ESCA | 1 |
| p.R47L | LUAD | 1 |
| p.N90K | STAD | 1 |
| p.G740D | LUAD | 1 |
| p.Q1121* | SKCM | 1 |
| p.T572M | HNSC | 1 |
| p.E634* | LUAD | 1 |
| p.G490E | SKCM | 1 |
| p.S92F | SKCM | 1 |
| p.E502K | BLCA | 1 |
| p.E1062K | LUAD | 1 |
| p.G160S | ACC | 1 |
| p.S540R | LUAD | 1 |
| p.R1169T | CESC | 1 |
| p.L1122P | PRAD | 1 |
| p.S808Y | LUAD | 1 |
| p.A297V | STAD | 1 |
| p.L665H | BLCA | 1 |
| p.G1226E | SKCM | 1 |
| p.S61G | UVM | 1 |
| p.S765N | SKCM | 1 |
| p.N302K | HNSC | 1 |
| p.A860S | ESCA | 1 |
| p.A455V | ESCA | 1 |
| p.Q955* | SKCM | 1 |
| p.S61G | PRAD | 1 |
| p.D971N | OV | 1 |
| p.N1160K | LUAD | 1 |
| p.E613K | ESCA | 1 |
| p.P856T | LUAD | 1 |
| p.A575T | BLCA | 1 |
| p.C48Y | LGG | 1 |
| p.D41H | LUAD | 1 |
| p.S540G | SKCM | 1 |
| p.N64D | STAD | 1 |
| p.S493L | SKCM | 1 |
| p.C620S | PRAD | 1 |
| p.P1165Q | LUAD | 1 |
| p.L1241F | COAD | 1 |
| p.S189F | SKCM | 1 |
| p.N1257K | LUAD | 1 |
| p.S704R | LUAD | 1 |
| p.G160S | COAD | 1 |
| p.E514D | LUAD | 1 |
| p.I246T | PRAD | 1 |
| p.S288G | SKCM | 1 |
| p.P415T | SKCM | 1 |
| p.G162S | COAD | 1 |
| p.Q328E | SKCM | 1 |
| p.T42I | SKCM | 1 |
| p.T1172M | READ | 1 |
| p.N261D | LIHC | 1 |
| p.R950K | SKCM | 1 |
| p.D722H | BLCA | 1 |
| p.P293L | SKCM | 1 |
| p.K1035R | LUSC | 1 |
| p.Q10E | BLCA | 1 |
| p.A272T | LUAD | 1 |
| p.G63S | UVM | 1 |
| p.T776M | PRAD | 1 |
| p.M723I | ESCA | 1 |
| p.S61G | LUAD | 1 |
| p.T990A | LUAD | 1 |
| p.P1113S | SKCM | 1 |
| p.R251C | READ | 1 |
| p.L185V | SKCM | 1 |
| p.E1088K | SKCM | 1 |
| p.Q112* | SKCM | 1 |
| p.A208T | THYM | 1 |
| p.Q425E | SKCM | 1 |
| p.D704E | THYM | 1 |
| p.Q1218X | SKCM | 1 |
| p.D1002N | SKCM | 1 |
| p.Q10H | STAD | 1 |
| p.V780I | KIRC | 1 |
| p.P702S | SKCM | 1 |
| p.R995L | ESCA | 1 |
| p.S397Y | LUAD | 1 |
| p.F824V | STAD | 1 |
| p.H374N | PRAD | 1 |
| p.M812I | SKCM | 1 |
| p.N1208K | LUSC | 1 |
| p.S527N | SKCM | 1 |
| p.P334L | LUAD | 1 |
| p.Q32K | COAD | 1 |
| p.T1279M | ESCA | 1 |
| p.M775I | SKCM | 1 |
| p.A1094E | LUAD | 1 |
| p.R372C | PRAD | 1 |
| p.G633R | LUSC | 1 |
| p.G362R | LIHC | 1 |
| p.P702L | SKCM | 1 |
| p.A171V | STAD | 1 |
| p.V683I | KIRC | 1 |
| p.H926Y | GBM | 1 |
| p.S1049L | SKCM | 1 |
| p.M626I | ESCA | 1 |
| p.E965K | LUAD | 1 |
| p.I837N | COAD | 1 |
| p.A455G | KIRP | 1 |
| p.D1102N | SKCM | 1 |
| p.A438V | UCEC | 1 |
| p.H43R | UCEC | 1 |
| p.R154C | HNSC | 1 |
| p.P1262Q | LUAD | 1 |
| p.G791D | SKCM | 1 |
| p.D1220Y | LGG | 1 |
| p.P89L | SKCM | 1 |
| p.P436S | SKCM | 1 |
| p.H505D | HNSC | 1 |
| p.P548S | LUAD | 1 |
| p.S1156F | SKCM | 1 |
| p.H155Q | LUAD | 1 |
| p.P490H | STAD | 1 |
| p.S862N | SKCM | 1 |
| p.P334T | LUAD | 1 |
| p.S711Y | LUAD | 1 |
| p.P1000S | SKCM | 1 |
| p.P587L | SKCM | 1 |
| p.S46R | LUAD | 1 |
| p.N399K | HNSC | 1 |
| p.P407S | PRAD | 1 |
| p.R1195W | UCEC | 1 |
| p.L167F | LGG | 1 |
| p.S345F | LUAD | 1 |
| p.V74I | HNSC | 1 |
| p.A117V | BLCA | 1 |
| p.E625K | SKCM | 1 |
| p.P980S | SKCM | 1 |
| p.G1129E | SKCM | 1 |
| p.T745M | PRAD | 1 |
| p.G483R | STAD | 1 |
| p.S667F | ESCA | 1 |
| p.G870V | PAAD | 1 |
| p.M1203I | SKCM | 1 |
| p.S1116F | DLBC | 1 |
| p.G492D | STAD | 1 |
| p.P293S | SKCM | 1 |
| p.T648M | PRAD | 1 |
| p.N1281T | ESCA | 1 |
| p.T1172M | COAD | 1 |
| p.D1004N | SKCM | 1 |
| p.D907N | SKCM | 1 |
| p.S837N | SKCM | 1 |
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| TissGeneCNV for SALL1 |
| Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples) (TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16) |
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| TissGeneFusions for SALL1 |
| Fusion genes including TissGene (ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01) |
| Database | Src | Cancer type | Sample | Fusion gene | ORF | 5'-gene BP | 3'-gene BP |
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| TissGeneNet for SALL1 |
| Co-expressed gene networks based on protein-protein interaction data (CePIN) (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (PINA2 ppi data) |
| BRCA (tumor) | BRCA (normal) |
| SALL1, PTPN6, CD44, S100A9, SRC, TGFBR1, HDAC1, CTNNB1, PTPN1, PTEN, PRKACA, NGFR, PDIA3, GJB1, DDX5, TRPC1, PLD2, PLAA, AQP3, NKD2, GJB2 (tumor) | SALL1, TNFRSF1A, SCN9A, TGFBR1, MAPK1, HDAC1, CTNNB1, PTEN, RHOA, TRAF2, PDGFRB, NTRK1, BTK, S1PR1, TRPC1, RCVRN, CAV2, GJA1, PDGFRA, NKD2, GJB2 (normal) |
 |  |
| COAD (tumor) | COAD (normal) |
| SALL1, PTPN6, TGFBR1, HDAC1, PTPN11, PRKACA, ADRBK1, CXCR4, NGFR, SOX2, GJB1, BTK, CTSA, TRADD, CSK, TRPC1, EDNRB, PTPRF, CAV2, GRK5, GJB2 (tumor) | SALL1, SUMO2, NEU3, SCN9A, SRC, PTGS2, SUMO1, CTNNB1, PTPN1, TRAF2, PDGFRB, NOS2, ITCH, S1PR1, TRADD, EDNRB, RCVRN, TSC2, GJA1, PDGFRA, NKD2 (normal) |
 |  |
| HNSC (tumor) | HNSC (normal) |
| SALL1, S100A9, SUMO2, SCN9A, HDAC2, PTPN1, ADRBK1, UBE2I, PDGFRB, GJB1, DDX5, EDNRB, CAV2, BMX, TSC2, PDGFRA, PLAA, FLOT2, RHOC, NKD2, GJB2 (tumor) | SALL1, SUMO2, NEU3, SCN9A, RAC1, TGFBR1, MAPK1, CTNNB1, PTPN11, TRAF2, PDGFRB, S1PR1, TRPC1, EDNRB, RCVRN, GRK5, GJA1, PDGFRA, AQP3, FLOT2, NKD2 (normal) |
 |  |
| KICH (tumor) | KICH (normal) |
| SALL1, CD44, TNFRSF1A, SCN9A, RAC1, MAPK1, RHOA, CXCR4, TERF1, NGFR, NTRK1, BTK, TRADD, CAV2, GRK1, GJA1, PLAA, AQP3, RHOC, NKD2, GJB2 (tumor) | SALL1, NEU3, SCN9A, SRC, TGFBR1, MAPK1, CTNNB1, RHOA, ADRBK1, TNF, PDIA3, IRAK1, NOS2, GJB1, CTSA, CSK, EDNRB, PLD2, PLAA, AQP3, RHOC (normal) |
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| KIRC (tumor) | KIRC (normal) |
| SALL1, CD44, TNFRSF1A, SCN9A, PTPN1, PTEN, CXCR4, TERF1, NGFR, PDGFRB, NTRK1, IRAK1, BTK, EDNRB, GRK5, GJA1, PLD2, AQP3, RHOC, NKD2, GJB2 (tumor) | SALL1, CD44, RAC1, MAPK1, PTGS2, PTEN, PRKACA, UBE2I, SOX2, PDIA3, NOS2, GJB1, S1PR1, CTSA, TRADD, EDNRB, PTPRF, PDGFRA, PLD2, AQP3, FLOT2 (normal) |
 |  |
| KIRP (tumor) | KIRP (normal) |
| SALL1, CD44, TNFRSF1A, SCN9A, MAPK1, TRAF2, TNF, CXCR4, NGFR, PDGFRB, NTRK1, IRAK1, BTK, CTSA, GRK5, GJA1, PLD2, AQP3, RHOC, NKD2, GJB2 (tumor) | SALL1, PTPN6, CD44, S100A9, SUMO2, MAPK1, PTGS2, HDAC1, SUMO1, PTPN1, ADRBK1, NGFR, SOX2, PDIA3, GJB1, S1PR1, CSK, TRPC1, EDNRB, BMX, PLD2 (normal) |
 |  |
| LIHC (tumor) | LIHC (normal) |
| SALL1, PTPN6, SRC, PTGS2, HDAC1, CTNNB1, PTPN11, PTEN, RHOA, ADRBK1, TRAF2, UBE2I, IRAK1, ITCH, CTSA, TRADD, BMX, PLAA, RHOC, NKD2, GJB2 (tumor) | SALL1, PTPN6, S100A9, SUMO2, NEU3, RAC1, HDAC2, CTNNB1, TRAF2, UBE2I, CXCR4, FLOT1, NTRK1, ITCH, TOLLIP, GJB1, BTK, S1PR1, CSK, TRPC1, RHOC (normal) |
 |  |
| LUAD (tumor) | LUAD (normal) |
| SALL1, SUMO2, SCN9A, RAC1, HDAC2, SUMO1, PRKACA, ADRBK1, NGFR, PDGFRB, NTRK1, IRAK1, ITCH, TOLLIP, GJB1, CSK, CAV2, PDGFRA, FLOT2, RHOC, NKD2 (tumor) | SALL1, TNFRSF1A, HDAC2, HDAC1, RHOA, ADRBK1, TRAF2, TERF1, NGFR, SOX2, PDGFRB, GJB1, CTSA, TRADD, TRPC1, EDNRB, CAV2, GJA1, PDGFRA, PLD2, AQP3 (normal) |
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| LUSC (tumor) | LUSC (normal) |
| SALL1, CD44, SUMO2, HDAC2, PTGS2, CTNNB1, PTPN11, PRKACA, UBE2I, NTRK1, BTK, CTSA, CSK, EDNRB, PTPRF, CAV2, BMX, TSC2, GRK5, GJA1, GJB2 (tumor) | SALL1, S100A9, SCN9A, RAC1, TGFBR1, MAPK1, PTGS2, PTPN11, RHOA, ADRBK1, SOX2, PDGFRB, PDIA3, TRPC1, RCVRN, BMX, GJA1, PLD2, AQP3, RHOC, NKD2 (normal) |
 |  |
| PRAD (tumor) | PRAD (normal) |
| SALL1, SUMO2, RAC1, TGFBR1, HDAC2, PTGS2, SUMO1, RHOA, TRAF2, CXCR4, TERF1, SOX2, PDIA3, CSK, EDNRB, RCVRN, PTPRF, GRK1, TSC2, PDGFRA, PLD2 (tumor) | SALL1, SCN9A, TGFBR1, PTGS2, CTNNB1, ADRBK1, NGFR, TNFRSF1B, SOX2, PDGFRB, PDIA3, NOS2, ITCH, BTK, S1PR1, TRPC1, CAV2, GRK5, GJA1, PDGFRA, NKD2 (normal) |
 |  |
| STAD (tumor) | STAD (normal) |
| SALL1, PTPN6, CD44, SRC, TGFBR1, MAPK1, HDAC1, PTPN11, PTEN, ADRBK1, CXCR4, NGFR, TNFRSF1B, PDIA3, GJB1, BTK, TRPC1, CAV2, GJA1, PLAA, RHOC (tumor) | SALL1, S100A9, SUMO2, SCN9A, SRC, PTGS2, PRKACA, UBE2I, TNF, NGFR, PDIA3, NOS2, GJB1, CTSA, TRPC1, EDNRB, PTPRF, GRK5, PDGFRA, AQP3, GJB2 (normal) |
 |  |
| THCA (tumor) | THCA (normal) |
| SALL1, PTPN6, SUMO2, NEU3, TNFRSF1A, MAPK1, PTPN11, ADRBK1, UBE2I, CXCR4, TNFRSF1B, NTRK1, ITCH, CTSA, TRADD, CSK, PTPRF, GRK1, TSC2, RHOC, NKD2 (tumor) | SALL1, PTPN6, CD44, S100A9, RAC1, HDAC1, CTNNB1, PTPN1, PTPN11, PRKACA, UBE2I, TERF1, FLOT1, IRAK1, TRADD, EDNRB, CAV2, GRK5, PLD2, AQP3, RHOC (normal) |
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| TissGeneProg for SALL1 |
| Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image to enlarge it in a new window. |
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| Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
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| Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
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| Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
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| TissGeneClin for SALL1 |
| TissGeneDrug for SALL1 |
| Drug information targeting TissGene (DrugBank Version 5.0.6, 2017-04-01) |
| DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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| TissGeneDisease for SALL1 |
| Disease information associated with TissGene (DisGeNet, 2016-06-01) |
| Disease ID | Disease name | # pubmeds | Source |
| umls:C0265246 | Townes syndrome | 28 | BeFree,CLINVAR,CTD_human,MGD,ORPHANET |
| umls:C0000768 | Congenital Abnormality | 6 | BeFree,CTD_human |
| umls:C0206762 | Limb Deformities, Congenital | 3 | BeFree,CTD_human |
| umls:C0011649 | Dermoid Cyst | 2 | BeFree |
| umls:C0220681 | Goldenhar Syndrome with Ipsilateral Radial Defect | 2 | BeFree |
| umls:C0265240 | Goldenhar Syndrome | 2 | BeFree |
| umls:C3536714 | Renal dysplasia | 2 | BeFree |
| umls:C0006142 | Malignant neoplasm of breast | 1 | BeFree |
| umls:C0007102 | Malignant tumor of colon | 1 | BeFree |
| umls:C0019348 | Herpes Simplex Infections | 1 | BeFree |
| umls:C0022658 | Kidney Diseases | 1 | BeFree |
| umls:C0023267 | Fibroid Tumor | 1 | BeFree |
| umls:C0024537 | Malaria, Vivax | 1 | BeFree |
| umls:C0027708 | Nephroblastoma | 1 | BeFree |
| umls:C0032002 | Pituitary Diseases | 1 | BeFree |
| umls:C0041182 | Trophoblastic Neoplasms | 1 | BeFree |
| umls:C0042133 | Uterine Fibroids | 1 | BeFree |
| umls:C0158687 | Congenital malformation of genital organs | 1 | BeFree |
| umls:C0235831 | Renal Cell Dysplasia | 1 | BeFree |
| umls:C0265234 | Branchio-Oto-Renal Syndrome | 1 | BeFree |
| umls:C0333875 | High-Grade Squamous Intraepithelial Lesions | 1 | BeFree |
| umls:C0678222 | Breast Carcinoma | 1 | BeFree |
| umls:C0699790 | Colon Carcinoma | 1 | BeFree |
| umls:C1302773 | Low Grade Squamous Intraepithelial Neoplasia | 1 | BeFree |
| umls:C1302790 | Congenital malformation syndrome | 1 | BeFree |
| umls:C1318973 | Staphylococcus aureus infection | 1 | BeFree |
| umls:C1862683 | Townes-Brocks-Branchiootorenal-Like Syndrome | 0 | CLINVAR |
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