TissGeneSummary for SPTA1 |
Gene summary |
Basic gene information | Gene symbol | SPTA1 |
Gene name | spectrin, alpha, erythrocytic 1 | |
Synonyms | EL2|HPP|HS3|SPH3|SPTA | |
Cytomap | UCSC genome browser: 1q21 | |
Type of gene | protein-coding | |
RefGenes | NM_003126.2, | |
Description | alpha-I spectrinelliptocytosis 2erythroid alpha-spectrinspectrin alpha chain, erythrocytespectrin alpha chain, erythrocytic 1spectrin, alpha, erythrocytic 1 (elliptocytosis 2) | |
Modification date | 20141207 | |
dbXrefs | MIM : 182860 | |
HGNC : HGNC | ||
Ensembl : ENSG00000163554 | ||
HPRD : 01685 | ||
Vega : OTTHUMG00000019636 | ||
Protein | UniProt: go to UniProt's Cross Reference DB Table | |
Expression | CleanEX: HS_SPTA1 | |
BioGPS: 6708 | ||
Pathway | NCI Pathway Interaction Database: SPTA1 | |
KEGG: SPTA1 | ||
REACTOME: SPTA1 | ||
Pathway Commons: SPTA1 | ||
Context | iHOP: SPTA1 | |
ligand binding site mutation search in PubMed: SPTA1 | ||
UCL Cancer Institute: SPTA1 | ||
Assigned class in TissGDB* | C | |
Included tissue-specific gene expression resources | HPA,TiGER | |
Specific-tissues in normal samples (assigned by TissGDB using HPA, TiGER, and GTEx) | Bone marrowLiver | |
Cancer types related to the specific-tissues in cancer samples (assigned by TissGDB using TCGA) | LAMLLIHC | |
Reference showing the relevant tissue of SPTA1 | ||
Description by TissGene annotations | Cancer gene TissgsKTS CNV lost TissGeneKTS |
* Class A consists of genes with literature evidence and is part of the cTissGenes. Class B consists of only cTissGenes without additional evidence. The remaining genes belong to Class C. |
Gene ontology having evidence of Inferred from Direct Assay (IDA) from Entrez |
GO ID | GO term | PubMed ID |
Top |
TissGeneExp for SPTA1 |
Gene expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1)) (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
Gene isoform expressions across 28 cancer types (X-axis: cancer type and Y-axis: log2(norm_counts+1)) (TCGA pan-cancer tcga_rsem_isoform_tpm, version 2016-09-01) |
Gene expressions across normal tissues of GTEx data (GTEx GTEx_Analysis_v6_RNA-seq_RNA-SeQCv1.1.8_gene_rpkm.gct) - Here, we shows the matched tissue types only among our 28 cancer types. |
Different expressions across 14 cancer types with more than 10 samples between matched tumors and normals (X-axis: cancer type and Y-axis: log2(norm_counts+1)) (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) |
- Significantly differentially expressed cancer types and information. (|Fold change|>1 and FDR<0.05) |
Cancer type | Mean(exp) in tumor | Mean(exp) in matched normal | Log2FC | P-val. | FDR |
KIRC | -0.960416165 | -2.096420332 | 1.136004167 | 2.54E-09 | 8.19E-09 |
Top |
TissGene-miRNA for SPTA1 |
Significantly anti-correlated miRNAs of TissGene across 28 cancer types (Gene-miRNA relations from TargetScanHuman Relsease 7.1, Conserved_Site_Context_Scores.txt.zip, 06.01.2016) (TCGA IlluminaHiSeq_miRNASeq, log2(RPM+1) data, version 2016-11-21) (TCGA IlluminaHiSeq_RNASeqV2, log2(normalized_count+1) data, version 2016-08-16) (Spearman’s Rank Correlation (p-value<0.05 and coefficient<-0.25)) |
Cancer type | miRNA id | miRNA accession | P-val. | Coeff. | # samples |
Top |
TissGeneMut for SPTA1 |
TissGeneSNV for SPTA1 |
nsSNV counts per each loci. Different colors of circles represent different cancer types. Circle size denotes number of samples. (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) * Click on the image to enlarge it in a new window. |
Somatic nucleotide variants of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of mutated samples) The numbers in parentheses are numbers of samples with mutation (nsSNVs). (TCGA somatic mutation (SNPs and small INDELs) data, version 2016-04-25) |
- nsSNVs sorted by frequency. |
AAchange | Cancer type | # samples |
p.K1732T | STAD | 5 |
p.E1707K | SKCM | 4 |
p.D1438N | SKCM | 4 |
p.A2011V | LUAD | 3 |
p.S376L | SKCM | 3 |
p.E30K | SKCM | 3 |
p.E2077K | SKCM | 3 |
p.A1570T | LGG | 2 |
p.R356C | SKCM | 2 |
p.R1046* | STAD | 2 |
p.G212E | SKCM | 2 |
p.L908M | LUAD | 2 |
p.E2188K | SKCM | 2 |
p.R564L | LUAD | 2 |
p.A259V | SKCM | 2 |
p.A2011V | GBM | 2 |
p.E2275K | SKCM | 2 |
p.R1046X | STAD | 2 |
p.R891* | GBM | 2 |
p.R2016H | PRAD | 2 |
p.E7K | SKCM | 2 |
p.L895I | LUAD | 2 |
p.R2129K | SKCM | 2 |
p.R1281C | SKCM | 2 |
p.L778M | LUAD | 2 |
p.F1718L | UCEC | 2 |
p.G1845E | SKCM | 2 |
p.L1460I | LUAD | 2 |
p.T147I | LIHC | 2 |
p.R1158W | UCEC | 2 |
p.E1806Q | LIHC | 2 |
p.E1948K | SKCM | 2 |
p.G1882E | SKCM | 2 |
p.E1367K | SKCM | 2 |
p.G1643E | SKCM | 2 |
p.R1694H | UCEC | 2 |
p.K634T | STAD | 2 |
p.Q236H | LIHC | 1 |
p.N2199H | UCEC | 1 |
p.S1425F | SKCM | 1 |
p.A1703D | TGCT | 1 |
p.Q1398P | UCEC | 1 |
p.R1076H | KIRP | 1 |
p.R137H | STAD | 1 |
p.R2009C | THCA | 1 |
p.A1852S | HNSC | 1 |
p.S1313L | SKCM | 1 |
p.L825R | UCEC | 1 |
p.E1761K | SKCM | 1 |
p.P1027T | LIHC | 1 |
p.R1659Q | SKCM | 1 |
p.R41G | LUAD | 1 |
p.L332R | KIRC | 1 |
p.E1514K | SKCM | 1 |
p.H2000L | STAD | 1 |
p.P1986L | SKCM | 1 |
p.R739H | LUAD | 1 |
p.P993T | LUSC | 1 |
p.A1968E | COAD | 1 |
p.Q1981* | SKCM | 1 |
p.D1320H | PRAD | 1 |
p.R1223Q | SKCM | 1 |
p.Q2039E | ACC | 1 |
p.T817S | LUAD | 1 |
p.R834K | BLCA | 1 |
p.E2205K | SKCM | 1 |
p.R891X | PAAD | 1 |
p.R2211H | STAD | 1 |
p.V208L | LUSC | 1 |
p.D2084Y | LUSC | 1 |
p.K679N | OV | 1 |
p.E194K | PAAD | 1 |
p.W1801C | LUSC | 1 |
p.R774Q | PRAD | 1 |
p.L731F | SKCM | 1 |
p.I2236N | LUAD | 1 |
p.G1600E | SKCM | 1 |
p.A1937D | LUAD | 1 |
p.R994Q | SKCM | 1 |
p.Q902* | CESC | 1 |
p.E1226K | THCA | 1 |
p.D1320E | BLCA | 1 |
p.R1045W | STAD | 1 |
p.L408M | UCEC | 1 |
p.R1617W | STAD | 1 |
p.T913I | LIHC | 1 |
p.L1285I | LUAD | 1 |
p.A783P | ACC | 1 |
p.E1872K | SKCM | 1 |
p.V1031I | LUSC | 1 |
p.E2128K | SKCM | 1 |
p.A1209T | CHOL | 1 |
p.R774L | LUSC | 1 |
p.R564W | STAD | 1 |
p.V837F | UCEC | 1 |
p.Y2280C | LUAD | 1 |
p.Q162K | HNSC | 1 |
p.E1653K | SKCM | 1 |
p.R156Q | LUAD | 1 |
p.R1081C | STAD | 1 |
p.Q2253* | GBM | 1 |
p.I1903T | HNSC | 1 |
p.A225V | SKCM | 1 |
p.E98D | COAD | 1 |
p.L1585P | LUAD | 1 |
p.R1377K | SKCM | 1 |
p.D347Y | BRCA | 1 |
p.S109T | ESCA | 1 |
p.K918T | ESCA | 1 |
p.V164A | LUAD | 1 |
p.R1757H | GBM | 1 |
p.M2209I | SKCM | 1 |
p.E1396K | OV | 1 |
p.Q2195H | LUAD | 1 |
p.N218T | LUSC | 1 |
p.R1074H | LUSC | 1 |
p.R1065S | KICH | 1 |
p.P1050L | DLBC | 1 |
p.R28C | PRAD | 1 |
p.A605T | SKCM | 1 |
p.Q682K | LUSC | 1 |
p.R1493W | STAD | 1 |
p.R1164C | UCEC | 1 |
p.L771F | GBM | 1 |
p.T33S | PRAD | 1 |
p.R2016C | DLBC | 1 |
p.T85N | LUAD | 1 |
p.R891* | PAAD | 1 |
p.R41Q | OV | 1 |
p.A2023P | LUSC | 1 |
p.R1170W | LUAD | 1 |
p.Q1891* | LUAD | 1 |
p.Q1446E | LUAD | 1 |
p.K554N | PAAD | 1 |
p.R1176Q | BRCA | 1 |
p.D2243Y | LUAD | 1 |
p.A1457G | BLCA | 1 |
p.D1938N | LUAD | 1 |
p.T2120I | SKCM | 1 |
p.D2098E | ACC | 1 |
p.A2208V | GBM | 1 |
p.K2187N | ESCA | 1 |
p.D1993N | SKCM | 1 |
p.S2298F | SKCM | 1 |
p.R2009C | STAD | 1 |
p.R1551* | PAAD | 1 |
p.D1350H | LGG | 1 |
p.S2405Y | ESCA | 1 |
p.K1805E | STAD | 1 |
p.D953E | GBM | 1 |
p.Q968K | LUAD | 1 |
p.E127G | BRCA | 1 |
p.L1235V | LUAD | 1 |
p.Q161R | STAD | 1 |
p.A751V | COAD | 1 |
p.A1336V | BRCA | 1 |
p.S1527Y | LUSC | 1 |
p.L792V | LUAD | 1 |
p.A43T | LUSC | 1 |
p.E127K | SKCM | 1 |
p.A1523V | LUAD | 1 |
p.K93R | COAD | 1 |
p.E23K | LUAD | 1 |
p.R1065H | COAD | 1 |
p.A970P | LUAD | 1 |
p.W2172X | SKCM | 1 |
p.G2237V | LUAD | 1 |
p.R468H | GBM | 1 |
p.L2092M | UCEC | 1 |
p.C475Y | UCEC | 1 |
p.R250H | READ | 1 |
p.A777V | LUAD | 1 |
p.A571T | STAD | 1 |
p.W246S | OV | 1 |
p.R1984K | SKCM | 1 |
p.E194K | COAD | 1 |
p.T459A | LIHC | 1 |
p.R725L | HNSC | 1 |
p.R891* | UCEC | 1 |
p.G1677R | HNSC | 1 |
p.C2299* | LUAD | 1 |
p.Q1535* | SKCM | 1 |
p.T2235A | UCEC | 1 |
p.R1414N | LUAD | 1 |
p.I69V | LIHC | 1 |
p.L2020F | COAD | 1 |
p.R2399Q | LUAD | 1 |
p.V242A | LUSC | 1 |
p.R1984I | LUAD | 1 |
p.P1254L | SKCM | 1 |
p.R425L | UCEC | 1 |
p.V860I | SKCM | 1 |
p.W2172* | SKCM | 1 |
p.R1608S | LUAD | 1 |
p.Q1699H | STAD | 1 |
p.D748G | PRAD | 1 |
p.Q641R | PRAD | 1 |
p.L1709F | BLCA | 1 |
p.S1675F | SKCM | 1 |
p.P993L | SKCM | 1 |
p.R1551Q | BRCA | 1 |
p.F2169S | STAD | 1 |
p.G212R | SKCM | 1 |
p.K634T | ESCA | 1 |
p.Q2107* | SKCM | 1 |
p.R60* | BRCA | 1 |
p.I2236V | KIRP | 1 |
p.P2328T | THCA | 1 |
p.G2249W | LUSC | 1 |
p.Q1398_splice | UCEC | 1 |
p.E1831Q | SKCM | 1 |
p.G175* | LUSC | 1 |
p.L97F | SKCM | 1 |
p.G650S | SKCM | 1 |
p.R1074S | TGCT | 1 |
p.R725* | UCEC | 1 |
p.E1941X | STAD | 1 |
p.L1858V | COAD | 1 |
p.A2325V | STAD | 1 |
p.Q2261X | SKCM | 1 |
p.G66R | GBM | 1 |
p.A1318S | LUSC | 1 |
p.A21E | BLCA | 1 |
p.R1335G | LUAD | 1 |
p.I1157F | UCS | 1 |
p.R885H | STAD | 1 |
p.P399S | UCEC | 1 |
p.R887L | HNSC | 1 |
p.T1054S | DLBC | 1 |
p.S105L | SKCM | 1 |
p.P1132H | STAD | 1 |
p.I1060S | READ | 1 |
p.Q740K | HNSC | 1 |
p.G89W | COAD | 1 |
p.N2056K | LUAD | 1 |
p.F1120Y | LGG | 1 |
p.D1661N | SKCM | 1 |
p.E2311G | SKCM | 1 |
p.D2264Y | BRCA | 1 |
p.K2061T | STAD | 1 |
p.W669* | LGG | 1 |
p.E529K | SKCM | 1 |
p.R1811Q | CHOL | 1 |
p.N1268D | UCEC | 1 |
p.K1732T | COAD | 1 |
p.S618N | UCEC | 1 |
p.A1413V | PRAD | 1 |
p.L1960I | HNSC | 1 |
p.E1316K | BRCA | 1 |
p.V874F | LUAD | 1 |
p.I640L | BRCA | 1 |
p.T331A | LIHC | 1 |
p.S954C | GBM | 1 |
p.G1359V | LUAD | 1 |
p.D423N | SKCM | 1 |
p.R470H | BLCA | 1 |
p.V922L | LUAD | 1 |
p.N2359S | CESC | 1 |
p.L1301R | LUAD | 1 |
p.E1932K | SKCM | 1 |
p.A1714D | LUAD | 1 |
p.K329E | PRAD | 1 |
p.R470H | LGG | 1 |
p.R2211H | LUAD | 1 |
p.Q1332* | BLCA | 1 |
p.Q427H | UCEC | 1 |
p.D430N | BRCA | 1 |
p.H1591Y | LUSC | 1 |
p.E1100* | LUAD | 1 |
p.Q1261H | UCEC | 1 |
p.D1867H | LUAD | 1 |
p.Q2244K | LUAD | 1 |
p.K1803N | STAD | 1 |
p.K642T | STAD | 1 |
p.R1757C | PRAD | 1 |
p.D947N | PAAD | 1 |
p.K1897R | KIRP | 1 |
p.P1043S | LUAD | 1 |
p.I1137M | HNSC | 1 |
p.R994L | BLCA | 1 |
p.G2332S | SKCM | 1 |
p.R2290S | BRCA | 1 |
p.Q2384H | STAD | 1 |
p.G2329E | SKCM | 1 |
p.H1591Y | SKCM | 1 |
p.P233S | SKCM | 1 |
p.L1733V | STAD | 1 |
p.R2016H | PAAD | 1 |
p.R28H | GBM | 1 |
p.S2024L | UCEC | 1 |
p.R564Q | BLCA | 1 |
p.K1688Q | LIHC | 1 |
p.Q516K | LUAD | 1 |
p.G1323V | PRAD | 1 |
p.R468C | CESC | 1 |
p.R1070W | SKCM | 1 |
p.R2016L | LUAD | 1 |
p.A827T | PAAD | 1 |
p.C1524G | LUAD | 1 |
p.K238N | LUAD | 1 |
p.R1608P | OV | 1 |
p.M2396I | SKCM | 1 |
p.E1458D | UCEC | 1 |
p.R1507X | ESCA | 1 |
p.H197R | LUSC | 1 |
p.A1413V | LUAD | 1 |
p.L1267M | LUAD | 1 |
p.R28C | COAD | 1 |
p.K602I | BLCA | 1 |
p.R2290C | UCEC | 1 |
p.A750V | SKCM | 1 |
p.R468H | LUSC | 1 |
p.D1463N | HNSC | 1 |
p.L1418M | KIRC | 1 |
p.S1564F | SARC | 1 |
p.K1290R | UCEC | 1 |
p.D1938N | SKCM | 1 |
p.D1422N | GBM | 1 |
p.R785Q | GBM | 1 |
p.E813K | BLCA | 1 |
p.T1005M | BRCA | 1 |
p.I1917V | HNSC | 1 |
p.E670K | SKCM | 1 |
p.W246* | LUAD | 1 |
p.A1703D | SKCM | 1 |
p.T1240A | STAD | 1 |
p.S376* | SKCM | 1 |
p.E201G | BLCA | 1 |
p.A1712D | LUAD | 1 |
p.E473Q | CESC | 1 |
p.K2318R | STAD | 1 |
p.I1137F | ESCA | 1 |
p.N1563K | COAD | 1 |
p.R1608C | KIRC | 1 |
p.E589D | STAD | 1 |
p.R1436W | STAD | 1 |
p.S1976I | UCEC | 1 |
p.P1986S | SKCM | 1 |
p.R374Q | LUSC | 1 |
p.T1129A | STAD | 1 |
p.A750P | LIHC | 1 |
p.S2405F | SKCM | 1 |
p.N1286K | STAD | 1 |
p.R2211C | COAD | 1 |
p.L1565V | ESCA | 1 |
p.G975E | STAD | 1 |
p.R739H | BRCA | 1 |
p.E149G | LUAD | 1 |
p.A2365T | BRCA | 1 |
p.I1734M | OV | 1 |
p.R1223Q | PAAD | 1 |
p.L76V | STAD | 1 |
p.R1335C | GBM | 1 |
p.R45M | HNSC | 1 |
p.R1176L | LUAD | 1 |
p.E910Q | HNSC | 1 |
p.D424N | SKCM | 1 |
p.D2043Y | LUAD | 1 |
p.Q414K | LUAD | 1 |
p.E310K | BLCA | 1 |
p.S1284G | STAD | 1 |
p.Q980K | READ | 1 |
p.A675S | COAD | 1 |
p.E149D | UCEC | 1 |
p.R891* | CESC | 1 |
p.G2237A | STAD | 1 |
p.E185Q | GBM | 1 |
p.N857K | LUAD | 1 |
p.E1096G | STAD | 1 |
p.E1987X | LIHC | 1 |
p.D1927E | READ | 1 |
p.Q1371L | BLCA | 1 |
p.L2380F | SKCM | 1 |
p.S1008I | LUAD | 1 |
p.Q1169H | BLCA | 1 |
p.Q161H | UCEC | 1 |
p.L358M | LUSC | 1 |
p.D2264V | LUAD | 1 |
p.A964D | LUAD | 1 |
p.R991C | STAD | 1 |
p.E931D | STAD | 1 |
p.G2367C | LUAD | 1 |
p.R1224Q | PAAD | 1 |
p.R785X | COAD | 1 |
p.E1660Q | LUAD | 1 |
p.S1250G | ESCA | 1 |
p.L2238V | STAD | 1 |
p.R575H | STAD | 1 |
p.T147I | STAD | 1 |
p.R887* | SKCM | 1 |
p.H304Q | LUAD | 1 |
p.G1154A | KIRP | 1 |
p.W2172C | LUAD | 1 |
p.P2069T | LUAD | 1 |
p.A816T | OV | 1 |
p.S490I | BRCA | 1 |
p.R1793W | UVM | 1 |
p.E1583Q | MESO | 1 |
p.S1527Y | HNSC | 1 |
p.G308R | SKCM | 1 |
p.V215I | SKCM | 1 |
p.E26K | SKCM | 1 |
p.R1414C | LGG | 1 |
p.E364K | SKCM | 1 |
p.Q516* | ACC | 1 |
p.I809V | DLBC | 1 |
p.R1158Q | GBM | 1 |
p.S52F | SKCM | 1 |
p.D1357N | SKCM | 1 |
p.G1236R | SKCM | 1 |
p.E1837* | STAD | 1 |
p.I640T | LUAD | 1 |
p.D744N | SKCM | 1 |
p.E569K | SKCM | 1 |
p.P1767S | MESO | 1 |
p.D2182Y | LUAD | 1 |
p.L1857F | BLCA | 1 |
p.K830Q | UCEC | 1 |
p.G716R | BLCA | 1 |
p.S2386L | SKCM | 1 |
p.A1968V | BLCA | 1 |
p.L1652F | LUAD | 1 |
p.E685* | PAAD | 1 |
p.K1119M | SKCM | 1 |
p.G822E | SKCM | 1 |
p.T2123K | LUAD | 1 |
p.K602E | LUAD | 1 |
p.A1662S | PRAD | 1 |
p.V297L | GBM | 1 |
p.S2117I | LUSC | 1 |
p.S376X | SKCM | 1 |
p.E2104* | LUAD | 1 |
p.L2092Q | LUSC | 1 |
p.D410N | SKCM | 1 |
p.R1076C | LIHC | 1 |
p.W1165* | HNSC | 1 |
p.Q850E | PAAD | 1 |
p.E1283D | PRAD | 1 |
p.E1925D | PAAD | 1 |
p.E82D | READ | 1 |
p.D347G | LIHC | 1 |
p.E868K | UCEC | 1 |
p.D536G | LUAD | 1 |
p.Q1749P | STAD | 1 |
p.L2300P | LUAD | 1 |
p.L1561M | UCEC | 1 |
p.W385L | LUSC | 1 |
p.E1510G | LIHC | 1 |
p.T129M | SARC | 1 |
p.A897S | LUAD | 1 |
p.S333F | THCA | 1 |
p.K1814T | SKCM | 1 |
p.R1277H | GBM | 1 |
p.R448W | SKCM | 1 |
p.A943V | STAD | 1 |
p.L1973M | SKCM | 1 |
p.S1615I | LUAD | 1 |
p.E685X | PAAD | 1 |
p.L1086F | STAD | 1 |
p.N1105T | STAD | 1 |
p.E406* | UCEC | 1 |
p.D2218Y | LUAD | 1 |
p.A2226T | COAD | 1 |
p.E343D | STAD | 1 |
p.A2226T | LIHC | 1 |
p.R765W | THYM | 1 |
p.D1143V | STAD | 1 |
p.R1076S | LUAD | 1 |
p.E1038D | LUAD | 1 |
p.E247D | LUAD | 1 |
p.K918N | STAD | 1 |
p.E1837X | STAD | 1 |
p.I613M | STAD | 1 |
p.S421* | LUAD | 1 |
p.R2016H | KIRP | 1 |
p.V1140E | LUAD | 1 |
p.E2060K | SKCM | 1 |
p.W246C | PRAD | 1 |
p.Q1584H | LUSC | 1 |
p.R1493Q | UVM | 1 |
p.R1874Q | SKCM | 1 |
p.S1306R | LUAD | 1 |
p.R1164H | LUAD | 1 |
p.R887X | SKCM | 1 |
p.A735D | UCEC | 1 |
p.K1686N | UCEC | 1 |
p.T1596K | BLCA | 1 |
p.P1911L | SKCM | 1 |
p.K326T | LIHC | 1 |
p.N312Y | SKCM | 1 |
p.R2211H | BLCA | 1 |
p.S2298P | ESCA | 1 |
p.E2358K | PCPG | 1 |
p.L2075Q | LUAD | 1 |
p.E1109D | COAD | 1 |
p.D549Y | BRCA | 1 |
p.G1001D | SKCM | 1 |
p.T274A | STAD | 1 |
p.P993H | HNSC | 1 |
p.M2392I | UCEC | 1 |
p.P920T | LUAD | 1 |
p.T2372N | ESCA | 1 |
p.A1768V | ESCA | 1 |
p.S1950R | STAD | 1 |
p.L1651Q | LIHC | 1 |
p.N893Y | SKCM | 1 |
p.Q1406H | STAD | 1 |
p.E1381* | LUAD | 1 |
p.L1623P | STAD | 1 |
p.R2016H | COAD | 1 |
p.R1844L | LUAD | 1 |
p.L797Q | ESCA | 1 |
p.R1075G | STAD | 1 |
p.Q1609E | LUAD | 1 |
p.D1959H | LUAD | 1 |
p.S490I | LUAD | 1 |
p.Q1055X | KIRC | 1 |
p.M108I | LUAD | 1 |
p.Q641H | GBM | 1 |
p.K2034N | SKCM | 1 |
p.L1733M | ESCA | 1 |
p.R1277L | LUAD | 1 |
p.D1378N | UCEC | 1 |
p.Q641L | LUAD | 1 |
p.M1859I | LUSC | 1 |
p.E1766K | LUSC | 1 |
p.R2201K | SKCM | 1 |
p.A1256V | COAD | 1 |
p.E185D | BLCA | 1 |
p.W1482* | LUAD | 1 |
p.R2211H | COAD | 1 |
p.D1959Y | HNSC | 1 |
p.E1547D | STAD | 1 |
p.D1037N | BLCA | 1 |
p.E496* | HNSC | 1 |
p.D1721N | SKCM | 1 |
p.E1464* | LUSC | 1 |
p.I1559M | LUSC | 1 |
p.R1477H | LUSC | 1 |
p.Q161H | ESCA | 1 |
p.R1659P | LUAD | 1 |
p.E638K | SKCM | 1 |
p.L1034P | ESCA | 1 |
p.P1521H | LUAD | 1 |
p.R34W | COAD | 1 |
p.R891* | LUAD | 1 |
p.A1372V | UCEC | 1 |
p.A2150T | UCEC | 1 |
p.A970T | SKCM | 1 |
p.V1558I | UCEC | 1 |
p.D1013Y | LUAD | 1 |
p.E284K | STAD | 1 |
p.E733K | SKCM | 1 |
p.D2284N | BRCA | 1 |
p.A843V | HNSC | 1 |
p.E2042D | UCEC | 1 |
p.R848C | LUAD | 1 |
p.L1432F | ACC | 1 |
p.S1352I | HNSC | 1 |
p.K326E | LUAD | 1 |
p.K48T | LGG | 1 |
p.A1958V | THYM | 1 |
p.L142P | STAD | 1 |
p.A1606T | SKCM | 1 |
p.A2150S | COAD | 1 |
p.D1927N | SKCM | 1 |
p.L2013V | ESCA | 1 |
p.P2328R | LUAD | 1 |
p.E322K | BLCA | 1 |
p.L148Q | LUAD | 1 |
p.V164L | OV | 1 |
p.E185Q | BLCA | 1 |
p.P1521S | LUAD | 1 |
p.W2017C | SKCM | 1 |
p.M2209I | LUAD | 1 |
p.S1425F | UCEC | 1 |
p.R739C | COAD | 1 |
p.Q1261L | SKCM | 1 |
p.K1732T | CESC | 1 |
p.E1893K | SKCM | 1 |
p.V57A | SKCM | 1 |
p.R1984G | STAD | 1 |
p.A1998P | DLBC | 1 |
p.Q219K | COAD | 1 |
p.K2154N | BRCA | 1 |
p.R1414S | LUAD | 1 |
p.Q1999E | LUAD | 1 |
p.E26K | HNSC | 1 |
p.E1283K | SKCM | 1 |
p.N1836S | DLBC | 1 |
p.E1893K | STAD | 1 |
p.A1347T | THCA | 1 |
p.V1681I | LUAD | 1 |
p.G975E | SKCM | 1 |
p.L1629M | SKCM | 1 |
p.W352L | LUAD | 1 |
p.W2017G | COAD | 1 |
p.L1479Q | LUAD | 1 |
p.R575C | GBM | 1 |
p.D430N | BLCA | 1 |
p.E1731D | UCEC | 1 |
p.E194K | READ | 1 |
p.K601N | PRAD | 1 |
p.I170T | GBM | 1 |
p.T1854I | LIHC | 1 |
p.E589* | LUAD | 1 |
p.Q2378H | KIRC | 1 |
p.Y1082X | DLBC | 1 |
p.R156Q | ESCA | 1 |
p.R468L | BLCA | 1 |
p.P920L | LUAD | 1 |
p.P1027L | THCA | 1 |
p.R887* | LUAD | 1 |
p.Q1650* | LUAD | 1 |
p.E1058K | LUAD | 1 |
p.W1801C | LUAD | 1 |
p.E919K | SKCM | 1 |
p.Q528H | BLCA | 1 |
p.L937F | STAD | 1 |
p.V535I | STAD | 1 |
p.W669L | BLCA | 1 |
p.M492I | HNSC | 1 |
p.A1141D | UCEC | 1 |
p.Q1393H | LUSC | 1 |
p.K2331R | KIRC | 1 |
p.W1014R | LUAD | 1 |
p.S1284N | PAAD | 1 |
p.R1033K | LUAD | 1 |
p.M70I | SKCM | 1 |
p.R1335G | LUSC | 1 |
p.D1093N | SKCM | 1 |
p.R575L | LUAD | 1 |
p.W1935* | SKCM | 1 |
p.A2262D | SARC | 1 |
p.R2290L | LUAD | 1 |
p.E2077D | UCEC | 1 |
p.R959L | COAD | 1 |
p.S2135Y | STAD | 1 |
p.L146P | LUSC | 1 |
p.C1571W | READ | 1 |
p.A2093S | LUSC | 1 |
p.S507T | LUAD | 1 |
p.E1339D | LUSC | 1 |
p.E1759D | ACC | 1 |
p.L2323Q | LIHC | 1 |
p.F2276V | UCEC | 1 |
p.R2016H | LUAD | 1 |
p.E127Q | GBM | 1 |
p.G978A | LUAD | 1 |
p.E1283D | BLCA | 1 |
p.E646X | READ | 1 |
p.P993H | LUAD | 1 |
p.D2338N | UCS | 1 |
p.G1677V | LUAD | 1 |
p.S712C | LUAD | 1 |
p.L795Q | LUAD | 1 |
p.S770P | STAD | 1 |
p.E467X | PAAD | 1 |
p.L905M | LUAD | 1 |
p.P1027A | LUAD | 1 |
p.L260P | LIHC | 1 |
p.E1829Q | BRCA | 1 |
p.A1570T | UCEC | 1 |
p.E2188X | ESCA | 1 |
p.L1745P | SKCM | 1 |
p.T2191N | UCEC | 1 |
p.R1074H | ESCA | 1 |
p.E2337Q | BLCA | 1 |
p.E194K | SKCM | 1 |
p.R2028K | SKCM | 1 |
p.Q2261* | SKCM | 1 |
p.L148V | LUAD | 1 |
p.W1728C | LUAD | 1 |
p.Q2384K | UCEC | 1 |
p.E910K | SKCM | 1 |
p.E1354K | UCEC | 1 |
p.D953E | PRAD | 1 |
p.A1840T | HNSC | 1 |
p.E1892K | CESC | 1 |
p.K281N | LUSC | 1 |
p.E100* | LUAD | 1 |
p.E1174K | HNSC | 1 |
p.D423N | COAD | 1 |
p.S844N | LUAD | 1 |
p.K642E | ESCA | 1 |
p.R1387C | STAD | 1 |
p.W173* | SKCM | 1 |
p.E1941* | STAD | 1 |
p.E1892K | SKCM | 1 |
p.L2089M | STAD | 1 |
p.S2091F | LUAD | 1 |
p.L313F | UCEC | 1 |
p.R1419S | LUAD | 1 |
p.G293V | LUAD | 1 |
p.Q516* | HNSC | 1 |
p.Q95K | ACC | 1 |
p.D804N | SKCM | 1 |
p.R1224W | BLCA | 1 |
p.Q236E | SARC | 1 |
p.E1789K | SKCM | 1 |
p.K1290I | SKCM | 1 |
p.D1037N | STAD | 1 |
p.E282* | LUSC | 1 |
p.T853R | DLBC | 1 |
p.A562S | LUAD | 1 |
p.A2379D | UCS | 1 |
p.S1901F | SKCM | 1 |
p.G212V | HNSC | 1 |
p.R2151I | ACC | 1 |
p.E1726K | SKCM | 1 |
p.A1869S | PRAD | 1 |
p.E704K | SKCM | 1 |
p.E805* | LUAD | 1 |
p.D2408N | LUSC | 1 |
p.A1768D | LUAD | 1 |
p.F901L | BRCA | 1 |
p.E1580K | SKCM | 1 |
p.W1801C | UCS | 1 |
p.R2009H | HNSC | 1 |
p.H1360Y | STAD | 1 |
p.G1227S | SKCM | 1 |
p.A2011V | LUSC | 1 |
p.K2100Q | LUAD | 1 |
p.K1139R | STAD | 1 |
p.S1624P | ESCA | 1 |
p.H835L | LUAD | 1 |
p.F525Y | UCEC | 1 |
p.R785Q | UCEC | 1 |
p.R2401Q | SKCM | 1 |
p.L2227P | STAD | 1 |
p.S261C | HNSC | 1 |
p.R1277C | PRAD | 1 |
p.K1201M | ESCA | 1 |
p.R2399P | LUAD | 1 |
p.D1672Y | HNSC | 1 |
p.Q1401E | GBM | 1 |
p.A263T | BLCA | 1 |
p.D1672H | LUAD | 1 |
p.A572T | READ | 1 |
p.V297G | COAD | 1 |
p.F1291L | UCEC | 1 |
p.E733D | STAD | 1 |
p.M881T | LUAD | 1 |
p.D1774N | SKCM | 1 |
p.N1560K | THYM | 1 |
p.G212V | LUAD | 1 |
p.E1627K | BLCA | 1 |
p.K2187E | DLBC | 1 |
p.T147S | SKCM | 1 |
p.R1743I | UCEC | 1 |
p.E2349K | SKCM | 1 |
p.V1698F | LUAD | 1 |
p.A244T | BRCA | 1 |
p.F2412L | STAD | 1 |
p.P233R | LIHC | 1 |
p.V1108L | LUAD | 1 |
p.N1052H | STAD | 1 |
p.M2209I | ACC | 1 |
p.K1468* | LUAD | 1 |
p.R1608H | GBM | 1 |
p.L323V | STAD | 1 |
p.L1841F | LUSC | 1 |
p.T1965N | LIHC | 1 |
p.R885H | PRAD | 1 |
p.V1736G | STAD | 1 |
p.P2069T | LIHC | 1 |
p.L1327* | LUAD | 1 |
p.T114A | PAAD | 1 |
p.E1948Q | LUAD | 1 |
p.W352F | LUAD | 1 |
p.D1136N | SKCM | 1 |
p.T33I | UCEC | 1 |
p.E216D | LUSC | 1 |
p.T540I | SKCM | 1 |
p.R470H | THYM | 1 |
p.R250H | LGG | 1 |
p.K1710N | BLCA | 1 |
p.K634T | CESC | 1 |
p.A1487T | PAAD | 1 |
p.P84T | ESCA | 1 |
p.Q413H | LUAD | 1 |
p.R1158W | HNSC | 1 |
p.E1269D | BLCA | 1 |
p.E1100D | COAD | 1 |
p.I1137M | BLCA | 1 |
p.A1914S | LUAD | 1 |
p.R1507* | ESCA | 1 |
p.R1694C | STAD | 1 |
p.E353G | ESCA | 1 |
p.A1347T | COAD | 1 |
p.R848H | PRAD | 1 |
p.E1620D | LUSC | 1 |
p.L1966F | SKCM | 1 |
p.A777V | LUSC | 1 |
p.P759S | SKCM | 1 |
p.R855K | LUSC | 1 |
p.E467K | BLCA | 1 |
p.Q641R | ESCA | 1 |
p.E2270K | SKCM | 1 |
p.H441Q | KIRC | 1 |
p.Q161P | STAD | 1 |
p.F4S | LUAD | 1 |
p.P335H | LUAD | 1 |
p.R1387C | GBM | 1 |
p.G928S | LUAD | 1 |
p.D1259N | SKCM | 1 |
p.D78N | UCEC | 1 |
p.L2273V | ESCA | 1 |
p.L1886P | LUSC | 1 |
p.P2398Q | STAD | 1 |
p.R45G | LIHC | 1 |
p.A911G | LUSC | 1 |
p.E23Q | LUSC | 1 |
p.K940N | COAD | 1 |
p.R891* | PRAD | 1 |
p.E1711* | UCEC | 1 |
p.R994L | LUSC | 1 |
p.A2389V | UCEC | 1 |
p.W173R | STAD | 1 |
p.Q621L | PRAD | 1 |
p.D189Y | BLCA | 1 |
p.D549N | SKCM | 1 |
p.G559W | PRAD | 1 |
p.413_414QQ>H* | LUAD | 1 |
p.E23A | KIRC | 1 |
p.R137C | LUAD | 1 |
p.Y163N | LUAD | 1 |
p.R1793W | SARC | 1 |
p.Q700K | LUAD | 1 |
p.R1757C | BRCA | 1 |
p.K1382M | UCEC | 1 |
p.R575C | ESCA | 1 |
p.R2211C | PRAD | 1 |
p.K6N | COAD | 1 |
p.P1050T | BLCA | 1 |
p.E2312* | BRCA | 1 |
p.L749M | COAD | 1 |
p.W385* | SKCM | 1 |
p.A1916G | LUAD | 1 |
p.A957V | DLBC | 1 |
p.R739H | THYM | 1 |
p.E1251K | LUSC | 1 |
p.S421Y | LUAD | 1 |
p.N1836K | GBM | 1 |
p.G822A | ESCA | 1 |
p.W1943X | KICH | 1 |
p.R2297W | HNSC | 1 |
p.H758N | LUAD | 1 |
p.Q1059H | LUAD | 1 |
p.G2220R | BLCA | 1 |
p.L76V | ESCA | 1 |
p.E974G | LIHC | 1 |
p.W1097C | OV | 1 |
p.Q414* | LUAD | 1 |
p.R137L | LUSC | 1 |
p.D2345E | BLCA | 1 |
p.D698Y | UCEC | 1 |
p.A157S | PRAD | 1 |
p.T997I | SKCM | 1 |
p.W352C | LUAD | 1 |
Top |
TissGeneCNV for SPTA1 |
Copy number variations of TissGene across 28 cancer types (X-axis: cancer type and Y-axis: % of CNV samples) (TCGA Gistic2_CopyNumber_Gistic2_all_data_by_genes, Gistic2 copy number data, version 2016-08-16) |
Top |
TissGeneFusions for SPTA1 |
Fusion genes including TissGene (ChimerDB 3.0, 2016-12-01 and TCGA fusion Portal 2015-12-01) |
Database | Src | Cancer type | Sample | Fusion gene | ORF | 5'-gene BP | 3'-gene BP |
Chimerdb3.0 | ChiTaRs | NA | AI051248 | ERP27-SPTA1 | chr12:15067457 | chr1:158607854 | |
TCGAfusionPortal | PRADA | BRCA | TCGA-BH-A1EV-01A | SPTA1-GRIP1 | In-frame | Chr1:158631077 | Chr12:66923694 |
TCGAfusionPortal | PRADA | BRCA | TCGA-BH-A1EV-01A | FCGR2A-SPTA1 | Out-of-frame | Chr1:161476381 | Chr1:158632735 |
Top |
TissGeneNet for SPTA1 |
Co-expressed gene networks based on protein-protein interaction data (CePIN) (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (PINA2 ppi data) |
Top |
TissGeneProg for SPTA1 |
Kaplan-Meier plots with logrank tests of overall survival (OS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image to enlarge it in a new window. |
Kaplan-Meier plots with logrank test of relapse free survival (RFS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
Forest plot of Cox proportional hazard ratio (HR) and 95% CI of overall survival (OS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
Forest plot of Cox proportional hazard ratio (HR) and 95% CI of relapse free survival (RFS) using 28 cancer types (TCGA IlluminaHiSeq_RNASeqV2, pan-cancer normalized log2(norm_counts+1) data, version 2016-08-16) (TCGA clinicalMatrix, phenotype data, version 2016-04-27) * Click on the image enlarge it in a new window. |
Top |
TissGeneClin for SPTA1 |
TissGeneDrug for SPTA1 |
Drug information targeting TissGene (DrugBank Version 5.0.6, 2017-04-01) |
DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
TissGeneDisease for SPTA1 |
Disease information associated with TissGene (DisGeNet, 2016-06-01) |
Disease ID | Disease name | # pubmeds | Source |
umls:C1851741 | ELLIPTOCYTOSIS 2 (disorder) | 11 | CLINVAR,CTD_human,UNIPROT |
umls:C0013902 | Elliptocytosis, Hereditary | 5 | BeFree,ORPHANET |
umls:C0033860 | Psoriasis | 3 | BeFree |
umls:C0002878 | Anemia, Hemolytic | 2 | LHGDN |
umls:C0037889 | Hereditary spherocytosis | 2 | BeFree,ORPHANET |
umls:C0520739 | Hereditary pyropoikilocytosis | 2 | CLINVAR,CTD_human,UNIPROT |
umls:C1840392 | HYPERPIGMENTATION, FAMILIAL PROGRESSIVE | 2 | BeFree |
umls:C2674218 | SPHEROCYTOSIS, TYPE 1 (disorder) | 2 | BeFree,MGD |
umls:C0005283 | beta Thalassemia | 1 | LHGDN |
umls:C0020538 | Hypertensive disease | 1 | GAD |
umls:C0024299 | Lymphoma | 1 | LHGDN |
umls:C0024530 | Malaria | 1 | LHGDN |
umls:C0040336 | Tobacco Use Disorder | 1 | GAD |
umls:C0149925 | Small cell carcinoma of lung | 1 | BeFree |
umls:C3469521 | FANCONI ANEMIA, COMPLEMENTATION GROUP A (disorder) | 1 | BeFree |
umls:C0002895 | Anemia, Sickle Cell | 0 | MGD |
umls:C0221409 | Anemia, hereditary spherocytic hemolytic | 0 | ORPHANET |
umls:C2678338 | SPHEROCYTOSIS, TYPE 3 (disorder) | 0 | CLINVAR,CTD_human,MGD |