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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS44015440 Human T-lymphotropic Virus - Not given - - hg19 13 36191238 36191238 q13.3 SOHLH2, CCDC169-SOHLH2 Nontumor Adult T-cell leukemia High throughput sequenicng 24735963 2014 VISDB1.0
TVIS44015441 Human T-lymphotropic Virus - Not given - - hg19 13 46333036 46333036 q14.13 - Nontumor Adult T-cell leukemia High throughput sequenicng 24735963 2014 VISDB1.0
TVIS44015496 Human T-lymphotropic Virus - Not given - - hg19 13 63595772 63595772 q21.31 ENSG00000300663 Nontumor Adult T-cell leukemia High throughput sequenicng 24735963 2014 VISDB1.0
TVIS20004412 Human Papillomavirus HPV16 NC_001526.1
 3283 - GRCh37.p5 13 64489155 64489155 q21.31 - Tumor Oropharyngeal squamous cell carcinoma Detection of integrated papilloma sequences & PCR (DIPS-PCR) 24586376 2014 VISDB1.0
TVIS20004437 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 13 73336691 73336691 q22 - Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004438 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 13 29561644 29561644 q12 SLC7A1 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS10014883 Hepatitis B virus - NC_003977.1
 241 459 GRCh37.p10 13 114304787 114304984 q34 UPF3A Cell line Hepatocellular carcinoma PCR and Sanger sequencing 24582836 2014 VISDB1.0
TVIS20005071 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 13 88266533 88280722 q31.2 - Tumor Squamous-cell carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005078 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 13 71839096 71888688 q21.33 RPL35AP31, ENSG00000293895, DACH1 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20004551 Human Papillomavirus HPV16 NC_001526.2
 3105 3132 hg19 13 73513400 73513425 q22.1 LINC00393 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0