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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS43000111 Merkel cell polyomavirus - JN707599.1
 1508 3516 hg38 chr6 20569311 20635162 p22.3 CDKAL1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000112 Merkel cell polyomavirus - JN707599.1
 159 1498 hg38 chr5 52562625 52562630 q11.2 - Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000113 Merkel cell polyomavirus - JN707599.1
 543 4054 hg38 chr1 10790267 10790285 p36.22 CASZ1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000114 Merkel cell polyomavirus - JN707599.1
 1811 1802 hg38 chr2 197314282 197433173 q33.1 NPM1P46, ENSG00000202434, ANKRD44-DT, SF3B1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000115 Merkel cell polyomavirus - JN707599.1
 647 640 hg38 chr11 62505277 62728189 q12.3 ENSG00000257058, MIR6747, ENSG00000289562, ENSG00000308510, MTA2, ENSG00000254964, ROM1, ENSG00000304832, C11orf98, CSKMT, SNORA57, UQCC3, UBXN1, LRRN4CL, GNG3, ENSG00000295816, ENSG00000250659, EEF1G, ENSG00000255508, TUT1, EML3, B3GAT3, GANAB, LBHD1, BSCL2, HNRNPUL2-BSCL2, HNRNPUL2, TTC9C, AHNAK, INTS5, ENSG00000255432 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000116 Merkel cell polyomavirus - JN707599.1
 706 592 hg38 chr11 25063416 25063435 p14.3 LUZP2 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000117 Merkel cell polyomavirus - JN707599.1
 1818 1939 hg38 chr13 71480943 71546428 q21.33 DACH1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000118 Merkel cell polyomavirus - JN707599.1
 1663 1654 hg38 chr9 136133905 136432018 q34.3 ENSG00000305829, ENSG00000303985, ENSG00000279813, ENSG00000306667, DKFZP434A062, DNLZ, ENTR1, LHX3, QSOX2, ENSG00000299478, CCDC187, ENSG00000283769, GPSM1, ENSG00000289701, ENSG00000300558, CARD9, SNAPC4, PMPCA, INPP5E Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000119 Merkel cell polyomavirus - JN707599.1
 738 1519 hg38 chr5 51618447 51618453 q11.2 ENSG00000288035 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC
TVIS43000120 Merkel cell polyomavirus - JN707599.1
 397 4225 hg38 chr20 31665275 31785438 q11.21 ABALON, ENSG00000289492, BCL2L1-AS1, TPX2, BCL2L1 Cell line Merkel cell carcinoma Viral capture sequencing 32833988 2020 ViMIC