Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020594 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 125649840 126134386 q24.32 ENSG00000280125, ENSG00000280415, ENSG00000271184, ENSG00000306956, ENSG00000309089, ENSG00000280364, ENSG00000280398, ENSG00000286209, ENSG00000308481, LINC02826, LINC02359, ENSG00000286386, TMEM132B, LINC00939 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020595 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 125670430 126154976 q24.32 ENSG00000280125, ENSG00000280415, ENSG00000271184, ENSG00000306956, ENSG00000309089, ENSG00000280364, ENSG00000280398, ENSG00000280272, ENSG00000286209, ENSG00000308481, LINC02826, LINC02359, ENSG00000286386, LINC00939 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020596 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 125697098 126181644 q24.32 ENSG00000280125, ENSG00000280415, ENSG00000271184, ENSG00000306956, ENSG00000309089, ENSG00000280364, ENSG00000280398, ENSG00000280272, ENSG00000286209, ENSG00000308481, LINC02826, LINC02359, ENSG00000286386, LINC00939 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020597 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr13 109087312 109739660 q33.3,q34 MYO16-AS2, ENSG00000306568, LINC01067, LINC00399, ENSG00000289901, ENSG00000298024, ENSG00000295255, ENSG00000309005, ENSG00000294610, ENSG00000301741, ENSG00000295202, LINC00676, ENSG00000303952, LINC00370, ENSG00000297783, ENSG00000297807, ENSG00000307392, ENSG00000296995, ENSG00000308820, MYO16-AS1, ENSG00000285534, MYO16 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020598 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 174318720 175183448 q31.1 LINC01305, ENSG00000307106, ENSG00000280414, SP9, GPR155-DT, RPA3P1, ENSG00000279884, RNU6-5P, ENSG00000237798, ENSG00000309705, ENSG00000290018, H3P6, ENSG00000309691, ENSG00000304260, RNU6-763P, RNU6-1290P, RPL21P31, ENSG00000277948, ENSG00000229750, MIR933, ENSG00000293891, Y_RNA, ENSG00000301915, CIR1, SCRN3, CHRNA1, ATP5MC3, GPR155, ENSG00000236449, WIPF1, CHN1, ATF2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020599 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr4 158297423 159218575 q32.1 RNU4-79P, ENSG00000248387, ENSG00000302000, C4orf46, U3, ENSG00000294185, RNU6-128P, ENSG00000289999, SNORD39, PSME2P3, FABP5P12, Y_RNA, ENSG00000298444, MIR3688-1, MIR3688-2, ENSG00000304461, ENSG00000249901, ETFDH, PPID, ENSG00000302220, FNIP2, SPMIP2, RAPGEF2, ENSG00000250604, RXFP1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020600 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 79867040 80576757 q14.1 ENSG00000285586, RPL35AP18, AK4P5, ENSG00000272129, RPL17P25, ENSG00000279022, ENSG00000260645, RPSAP72, ENSG00000181705, ENSG00000216352, ENSG00000233835, ELOVL4, TTK, ENSG00000288071, ENSG00000218418, ENSG00000233967, ENSG00000299370, LINC01621, ENSG00000287816, GAPDHP63, BCKDHB Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020601 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr7 5041963 5081594 p22.1 RBAKDN, RBAK-RBAKDN, RBAK Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020602 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 95242178 96254406 q22.1 ENSG00000301251, ENSG00000253945, RNU6-690P, SRSF3P2, GAPDHP30, ENSG00000271349, ENSG00000270131, UQCRB-AS1, CFAP418, ENSG00000248762, ENSG00000297407, ENSG00000302443, GDF6, UQCRB, MTERF3, ENSG00000301237, ENSG00000296498, CFAP418-AS1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020603 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 95242976 96255204 q22.1 ENSG00000301251, ENSG00000253945, RNU6-690P, SRSF3P2, GAPDHP30, ENSG00000271349, ENSG00000270131, UQCRB-AS1, CFAP418, ENSG00000248762, ENSG00000297407, ENSG00000302443, GDF6, UQCRB, MTERF3, ENSG00000301237, ENSG00000296498, CFAP418-AS1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated