Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020614 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126896294 127908539 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, ENSG00000278324, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020615 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr9 95072402 97834684 q22.32,q22.33 ENSG00000296343, MIR23B, MIR27B, MIR3074, MIR24-1, ENSG00000229065, ENSG00000223849, RNA5SP288, ENSG00000296603, ENSG00000230221, ENSG00000271384, MT1P1, ENSG00000271314, ENSG00000271155, ENSG00000271659, ENSG00000297470, ENSG00000227358, ENSG00000307709, ENSG00000268926, ENSG00000298993, RNU2-46P, RNA5SP289, PARK7P2, ENSG00000302397, Y_RNA, ENSG00000302382, ENSG00000302362, EIF4BP3, ENSG00000309674, ENSG00000295713, ENSG00000301032, RNU6-1160P, NSA2P7, ENSG00000286835, ENSG00000300673, ENSG00000300691, ENSG00000294402, ENSG00000294420, ENSG00000233820, PTMAP11, ENSG00000227257, NUTM2G, ENSG00000294229, YRDCP2, TCEA1P1, GAS2L1P2, GAS2L1P2, VN1R51P, FAM220CP, ENSG00000277103, RNU6-798P, ZNF322P1, ENSG00000289356, MIR1302-8, ENSG00000297615, ENSG00000301262, ENSG00000231521, KRT18P13, ENSG00000260677, ENSG00000307267, PTCH1, ENSG00000229345, LINC00092, ENSG00000302345, ENSG00000287187, HSD17B3, HSD17B3-AS1, ENSG00000307454, ZNF367, ENSG00000287302, ENSG00000294376, PRXL2C, ZNF510, ANKRD18CP, ENSG00000203279, ENSG00000235494, SUGT1P4, STRA6LP, CCDC180, ENSG00000286375, TDRD7, TSTD2, XPA, AOPEP, ENSG00000305315, ENSG00000305334, ENSG00000228142, ERCC6L2-AS1, ERCC6L2, ENSG00000237212, ENSG00000275465, ENSG00000285269, SLC35D2, CDC14B, ENSG00000224848, ZNF782, ENSG00000294209, MFSD14CP, MFSD14CP, CTSV, SUGT1P4-STRA6LP, SUGT1P4-STRA6LP-CCDC180, ENSG00000228957, NCBP1, PTCSC2, FANCC, HABP4, TMOD1, ENSG00000228174 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020616 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr9 95072486 97834768 q22.32,q22.33 ENSG00000296343, MIR23B, MIR27B, MIR3074, MIR24-1, ENSG00000229065, ENSG00000223849, RNA5SP288, ENSG00000296603, ENSG00000230221, ENSG00000271384, MT1P1, ENSG00000271314, ENSG00000271155, ENSG00000271659, ENSG00000297470, ENSG00000227358, ENSG00000307709, ENSG00000268926, ENSG00000298993, RNU2-46P, RNA5SP289, PARK7P2, ENSG00000302397, Y_RNA, ENSG00000302382, ENSG00000302362, EIF4BP3, ENSG00000309674, ENSG00000295713, ENSG00000301032, RNU6-1160P, NSA2P7, ENSG00000286835, ENSG00000300673, ENSG00000300691, ENSG00000294402, ENSG00000294420, ENSG00000233820, PTMAP11, ENSG00000227257, NUTM2G, ENSG00000294229, YRDCP2, TCEA1P1, GAS2L1P2, GAS2L1P2, VN1R51P, FAM220CP, ENSG00000277103, RNU6-798P, ZNF322P1, ENSG00000289356, MIR1302-8, ENSG00000297615, ENSG00000301262, ENSG00000231521, KRT18P13, ENSG00000260677, ENSG00000307267, PTCH1, ENSG00000229345, LINC00092, ENSG00000302345, ENSG00000287187, HSD17B3, HSD17B3-AS1, ENSG00000307454, ZNF367, ENSG00000287302, ENSG00000294376, PRXL2C, ZNF510, ANKRD18CP, ENSG00000203279, ENSG00000235494, SUGT1P4, STRA6LP, CCDC180, ENSG00000286375, TDRD7, TSTD2, XPA, AOPEP, ENSG00000305315, ENSG00000305334, ENSG00000228142, ERCC6L2-AS1, ERCC6L2, ENSG00000237212, ENSG00000275465, ENSG00000285269, SLC35D2, CDC14B, ENSG00000224848, ZNF782, ENSG00000294209, MFSD14CP, MFSD14CP, CTSV, SUGT1P4-STRA6LP, SUGT1P4-STRA6LP-CCDC180, ENSG00000228957, NCBP1, PTCSC2, FANCC, HABP4, TMOD1, ENSG00000228174 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020617 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr9 95114951 97877233 q22.32,q22.33 ENSG00000223849, RNA5SP288, ENSG00000296603, ENSG00000230221, ENSG00000271384, MT1P1, ENSG00000271314, ENSG00000271155, ENSG00000271659, ENSG00000297470, ENSG00000227358, ENSG00000307709, ENSG00000268926, ENSG00000298993, RNU2-46P, RNA5SP289, PARK7P2, ENSG00000302397, Y_RNA, ENSG00000302382, ENSG00000302362, EIF4BP3, ENSG00000309674, ENSG00000295713, ENSG00000301032, RNU6-1160P, NSA2P7, ENSG00000286835, ENSG00000300673, ENSG00000300691, ENSG00000294402, ENSG00000294420, ENSG00000233820, PTMAP11, ENSG00000227257, NUTM2G, ENSG00000294229, YRDCP2, TCEA1P1, GAS2L1P2, GAS2L1P2, VN1R51P, FAM220CP, ENSG00000277103, RNU6-798P, ZNF322P1, ENSG00000289356, MIR1302-8, ENSG00000297615, ENSG00000301262, ENSG00000231521, KRT18P13, ENSG00000260677, ENSG00000307267, FOXE1, PTCH1, ENSG00000229345, LINC00092, ENSG00000302345, ENSG00000287187, HSD17B3, HSD17B3-AS1, ENSG00000307454, ZNF367, ENSG00000287302, ENSG00000294376, PRXL2C, ZNF510, ANKRD18CP, ENSG00000203279, ENSG00000235494, SUGT1P4, STRA6LP, CCDC180, ENSG00000286375, TDRD7, TSTD2, XPA, AOPEP, ENSG00000305315, ENSG00000305334, ENSG00000228142, ERCC6L2-AS1, ERCC6L2, ENSG00000237212, ENSG00000275465, ENSG00000285269, SLC35D2, CDC14B, ENSG00000224848, ZNF782, ENSG00000294209, MFSD14CP, MFSD14CP, CTSV, SUGT1P4-STRA6LP, SUGT1P4-STRA6LP-CCDC180, ENSG00000228957, NCBP1, PTCSC2, FANCC, HABP4, TMOD1, ENSG00000228174 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020618 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 53535091 53928875 q13.13 RPL31P51, ENSG00000305918, ENSG00000299015, RN7SKP289, ENSG00000309359, ENSG00000275488, ATP5MC2, CALCOCO1, CISTR, ENSG00000306662, ATF7-NPFF, ATF7, ENSG00000285692, ENSG00000286069, ENSG00000306638 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020619 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 53535108 53928892 q13.13 RPL31P51, ENSG00000305918, ENSG00000299015, RN7SKP289, ENSG00000309359, ENSG00000275488, ATP5MC2, CALCOCO1, CISTR, ENSG00000306662, ATF7-NPFF, ATF7, ENSG00000285692, ENSG00000286069, ENSG00000306638 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020620 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 92861138 93254914 q22 HNRNPA1P50, ENSG00000300165, RNU6-1329P, Y_RNA, DPPA3P5, RPL41P5, NACAP8, LINC02413, ENSG00000257746, LINC02412, EEA1, ENSG00000301399, ENSG00000257252 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020621 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 92861364 93255140 q22 HNRNPA1P50, ENSG00000300165, RNU6-1329P, Y_RNA, DPPA3P5, RPL41P5, NACAP8, LINC02413, ENSG00000257746, LINC02412, EEA1, ENSG00000301399, ENSG00000257252 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020622 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr4 180433153 181354306 q34.3 NDUFB5P1, ENSG00000298435, ENSG00000301375, ENSG00000301395, ENSG00000248770, LINC02500, ENSG00000295731, ENSG00000304972, ENSG00000299149, ENSG00000289951, ENSG00000249883, LINC00290 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020623 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr4 180438635 181359788 q34.3 NDUFB5P1, ENSG00000298435, ENSG00000301375, ENSG00000301395, ENSG00000248770, LINC02500, ENSG00000295731, ENSG00000304972, ENSG00000299149, ENSG00000289951, ENSG00000249883, LINC00290 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated