Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020494 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr20 15008997 15028351 p12.1 RNU6-1159P, RNU6-115P, MACROD2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020495 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr20 15036155 15055509 p12.1 MACROD2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020496 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 77787065 78496782 q14.1 MEI4, ENSG00000230309 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020497 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 77796927 78506644 q14.1 MEI4, ENSG00000230309 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020498 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 77805924 78515641 q14.1 MEI4, ENSG00000230309 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020499 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 77807345 78517062 q14.1 MEI4, ENSG00000230309 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020500 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 91946318 92134344 p11.1 ENSG00000235147, IGKV1OR2-2, CHEK2P3, ENSG00000294660 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020501 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr20 37902183 39273540 q11.23,q12 RN7SKP185, RN7SL237P, ENSG00000277550, ENSG00000277829, ENSG00000275285, ENSG00000224635, ENSG00000275401, SNORA71, SNORA71B, SNORA71A, SNORA71C, SNORA71D, SNORA71, SNHG11, SNORA71E, SNORA60, MIR548O2, RPS3P2, ENSG00000213959, Metazoa_SRP, SLC32A1, RN7SKP173, RN7SL116P, ENSG00000274825, DHX35-DT, ENSG00000277581, NPM1P19, ENSG00000300619, ENSG00000287983, VSTM2L, RPRD1B, KIAA1755, ENSG00000206249, LBP, SNHG17, ADIG, ENSG00000289012, ENSG00000304652, ARHGAP40, ENSG00000301682, ACTR5, ENSG00000297212, PPP1R16B, DHX35, LINC01734, ENSG00000305049, TTI1, TGM2, ENSG00000293724, BPI, ENSG00000285347, ENSG00000285100, RALGAPB, ENSG00000301653, FAM83D, ENSG00000300599 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020502 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr5 135262772 135927083 q31.1 ENSG00000270021, ENSG00000303201, ENSG00000308968, NEUROG1, ENSG00000294972, ENSG00000294952, SLC25A48-AS1, ENSG00000294929, ENSG00000223539, MIR5692C1, ENSG00000304530, IL9, ENSG00000254239, DCANP1, TIFAB, ENSG00000249639, CXCL14, ENSG00000250378, ENSG00000253927, LECT2, MACROH2A1, ENSG00000250167, SLC25A48, PITX1-AS1, ENSG00000301931 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020503 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 140442081 141452180 q24.3 ENSG00000307873, ENSG00000307854, ENSG00000259891, CHRAC1, ENSG00000279766, ENSG00000280326, ERICD, MIR151A, ENSG00000279786, RNA5SP278, ENSG00000302188, ENSG00000253266, ENSG00000307200, ENSG00000310318, DENND3-AS1, ENSG00000280035, ENSG00000253307, SLC45A4-AS1, ENSG00000306487, ENSG00000297486, ENSG00000254291, LINC01300, ENSG00000302644, ENSG00000261655, ASTILCS, ENSG00000271959, ENSG00000238854, AGO2, ENSG00000303049, ENSG00000307178, ENSG00000296050, ENSG00000254197, GPR20, ENSG00000289263, MROH5, TRAPPC9, PTK2, ENSG00000302166, DENND3, SLC45A4, PTP4A3 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated