Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020544 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 - - - - Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020545 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 - - - - Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020546 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 36845391 38689138 q12 ENSG00000295719, ENSG00000302807, LHX1, ENSG00000276707, ENSG00000277911, ENSG00000277589, MIR2909, ENSG00000277579, ENSG00000278638, ENSG00000274308, HMGB1P24, ENSG00000293218, ENSG00000276810, ENSG00000276054, ENSG00000273965, ENSG00000275839, ENSG00000289110, ENSG00000298213, ENSG00000298194, MIR378J, ENSG00000302846, ENSG00000306576, YWHAEP7, RNU6-489P, ENSG00000297452, 5S_rRNA, ENSG00000301161, ENSG00000296826, TBC1D3L, ENSG00000309625, ENSG00000297953, Y_RNA, ENSG00000302878, TBC1D3E, RNA5SP526, ENSG00000296427, ENSG00000296410, Y_RNA, ENSG00000306455, ENSG00000305566, ENSG00000298497, ENSG00000274996, ENSG00000296690, EPOP, LHX1-DT, C17orf78, TADA2A, DUSP14, SYNRG, ENSG00000274244, HNF1B, ENSG00000306146, ENSG00000275173, TBC1D3K, ENSG00000297931, TBC1D3C, ENSG00000304197, NPEPPSP1, NPEPPSP1, TBC1D3, NPEPPSP1, ENSG00000296484, MRPL45, GPR179, ARHGAP23, ENSG00000276170, ENSG00000275532, AATF, ACACA, ENSG00000298167, ENSG00000277688, DDX52, YWHAEP7, TBC1D3D, SOCS7, SRCIN1, ENSG00000307699 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020547 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 36907859 38751606 q12 ENSG00000295719, ENSG00000302807, LHX1, ENSG00000276707, ENSG00000277911, ENSG00000277589, MIR2909, ENSG00000277579, ENSG00000278638, ENSG00000274308, HMGB1P24, ENSG00000293218, ENSG00000276810, ENSG00000276054, ENSG00000273965, ENSG00000275839, ENSG00000289110, ENSG00000298213, ENSG00000298194, MIR378J, ENSG00000302846, ENSG00000306576, YWHAEP7, RNU6-489P, ENSG00000297452, 5S_rRNA, ENSG00000301161, ENSG00000296826, TBC1D3L, ENSG00000309625, ENSG00000297953, Y_RNA, ENSG00000302878, TBC1D3E, RNA5SP526, ENSG00000296427, ENSG00000296410, Y_RNA, ENSG00000306455, ENSG00000305566, ENSG00000298497, ENSG00000274996, ENSG00000296690, EPOP, MIR4734, ENSG00000277969, MIR4726, ENSG00000279119, RNA5SP440, ENSG00000277182, LHX1-DT, C17orf78, TADA2A, DUSP14, SYNRG, ENSG00000274244, HNF1B, ENSG00000306146, ENSG00000275173, TBC1D3K, ENSG00000297931, TBC1D3C, ENSG00000304197, NPEPPSP1, NPEPPSP1, TBC1D3, NPEPPSP1, ENSG00000296484, MRPL45, GPR179, ARHGAP23, ENSG00000276170, ENSG00000275532, MLLT6, ENSG00000275665, CISD3, PCGF2, AATF, ACACA, ENSG00000298167, ENSG00000277688, DDX52, YWHAEP7, TBC1D3D, SOCS7, SRCIN1, ENSG00000307699 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020548 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 44614328 46536962 q21.31 SMCO4P1, ENSG00000267160, ENSG00000279879, RN7SL819P, RPL6P26, ENSG00000307712, HIGD1B, RN7SL405P, CCDC103, FAM187A, ENSG00000295646, MIR6783, KIF18B-DT, C1QL1, ENSG00000289024, ENSG00000267788, Y_RNA, MIR6784, ENSG00000276728, ENSG00000309064, HEXIM1, HEXIM2, FMNL1-AS1, ENSG00000293499, EFCAB15P, SPATA32, RNA5SP443, ENSG00000303778, ENSG00000267344, ENSG00000294490, ENSG00000236234, MIR4315-1, Metazoa_SRP, ENSG00000266918, RDM1P1, ENSG00000304996, ENSG00000285668, DND1P1, ENSG00000280022, MAPK8IP1P2, ENSG00000295828, RPS26P8, LINC02210, ENSG00000265547, SPPL2C, ENSG00000303280, ENSG00000303296, MAPT-IT1, Metazoa_SRP, STH, ENSG00000262372, KANSL1-AS1, Y_RNA, MAPK8IP1P1, ENSG00000305169, ENSG00000262539, ENSG00000291018, RN7SL656P, RDM1P2, LINC01180, MEIOC, CCDC43, DBF4B, ENSG00000307700, ADAM11, ENSG00000267405, ENSG00000267505, EFTUD2, GFAP, KIF18B, ENSG00000294432, DCAKD, PLCD3, ACBD4, HEXIM2-AS1, ENSG00000267288, FMNL1, MAP3K14-AS1, MAP3K14, ENSG00000267446, ARHGAP27, ENSG00000267198, ENSG00000291175, LRRC37A4P, LINC02210, ENSG00000306349, CRHR1, ENSG00000262881, ENSG00000305150, ARL17B, ENSG00000289729, LRRC37A, GJC1, FMNL1-DT, ENSG00000301815, PLEKHM1, LINC02210-CRHR1, MAPT-AS1, MAPT, ENSG00000305133, ENSG00000261575, ENSG00000294196, NSFP1, ARL17A, LRRC37A2, NMT1, KANSL1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020549 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 44631617 46554251 q21.31 SMCO4P1, ENSG00000267160, ENSG00000279879, RN7SL819P, RPL6P26, ENSG00000307712, HIGD1B, RN7SL405P, CCDC103, FAM187A, ENSG00000295646, MIR6783, KIF18B-DT, C1QL1, ENSG00000289024, ENSG00000267788, Y_RNA, MIR6784, ENSG00000276728, ENSG00000309064, HEXIM1, HEXIM2, FMNL1-AS1, ENSG00000293499, EFCAB15P, SPATA32, RNA5SP443, ENSG00000303778, ENSG00000267344, ENSG00000294490, ENSG00000236234, MIR4315-1, Metazoa_SRP, ENSG00000266918, RDM1P1, ENSG00000304996, ENSG00000285668, DND1P1, ENSG00000280022, MAPK8IP1P2, ENSG00000295828, RPS26P8, LINC02210, ENSG00000265547, SPPL2C, ENSG00000303280, ENSG00000303296, MAPT-IT1, Metazoa_SRP, STH, ENSG00000262372, KANSL1-AS1, Y_RNA, MAPK8IP1P1, ENSG00000305169, ENSG00000262539, ENSG00000291018, RN7SL656P, RDM1P2, RN7SL199P, LINC01180, MEIOC, CCDC43, DBF4B, ENSG00000307700, ADAM11, ENSG00000267405, ENSG00000267505, EFTUD2, GFAP, KIF18B, ENSG00000294432, DCAKD, PLCD3, ACBD4, HEXIM2-AS1, ENSG00000267288, FMNL1, MAP3K14-AS1, MAP3K14, ENSG00000267446, ARHGAP27, ENSG00000267198, ENSG00000291175, LRRC37A4P, LINC02210, ENSG00000306349, CRHR1, ENSG00000262881, ENSG00000305150, ARL17B, ENSG00000289729, LRRC37A, GJC1, FMNL1-DT, ENSG00000301815, PLEKHM1, LINC02210-CRHR1, MAPT-AS1, MAPT, ENSG00000305133, ENSG00000261575, ENSG00000294196, NSFP1, ARL17A, LRRC37A2, NMT1, KANSL1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020550 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 44643091 46565725 q21.31 SMCO4P1, ENSG00000267160, ENSG00000279879, RN7SL819P, RPL6P26, ENSG00000307712, HIGD1B, RN7SL405P, CCDC103, FAM187A, ENSG00000295646, MIR6783, KIF18B-DT, C1QL1, ENSG00000289024, ENSG00000267788, Y_RNA, MIR6784, ENSG00000276728, ENSG00000309064, HEXIM1, HEXIM2, FMNL1-AS1, ENSG00000293499, EFCAB15P, SPATA32, RNA5SP443, ENSG00000303778, ENSG00000267344, ENSG00000294490, ENSG00000236234, MIR4315-1, Metazoa_SRP, ENSG00000266918, RDM1P1, ENSG00000304996, ENSG00000285668, DND1P1, ENSG00000280022, MAPK8IP1P2, ENSG00000295828, RPS26P8, LINC02210, ENSG00000265547, SPPL2C, ENSG00000303280, ENSG00000303296, MAPT-IT1, Metazoa_SRP, STH, ENSG00000262372, KANSL1-AS1, Y_RNA, MAPK8IP1P1, ENSG00000305169, ENSG00000262539, ENSG00000291018, RN7SL656P, RDM1P2, RN7SL199P, FAM215B, LINC01180, MEIOC, CCDC43, DBF4B, ENSG00000307700, ADAM11, ENSG00000267405, ENSG00000267505, EFTUD2, GFAP, KIF18B, ENSG00000294432, DCAKD, PLCD3, ACBD4, HEXIM2-AS1, ENSG00000267288, FMNL1, MAP3K14-AS1, MAP3K14, ENSG00000267446, ARHGAP27, ENSG00000267198, ENSG00000291175, LRRC37A4P, LINC02210, ENSG00000306349, CRHR1, ENSG00000262881, ENSG00000305150, ARL17B, ENSG00000289729, LRRC37A, GJC1, FMNL1-DT, ENSG00000301815, PLEKHM1, LINC02210-CRHR1, MAPT-AS1, MAPT, ENSG00000305133, ENSG00000261575, ENSG00000294196, NSFP1, ARL17A, LRRC37A2, NMT1, KANSL1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020551 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 44644122 46566756 q21.31 SMCO4P1, ENSG00000267160, ENSG00000279879, RN7SL819P, RPL6P26, ENSG00000307712, HIGD1B, RN7SL405P, CCDC103, FAM187A, ENSG00000295646, MIR6783, KIF18B-DT, C1QL1, ENSG00000289024, ENSG00000267788, Y_RNA, MIR6784, ENSG00000276728, ENSG00000309064, HEXIM1, HEXIM2, FMNL1-AS1, ENSG00000293499, EFCAB15P, SPATA32, RNA5SP443, ENSG00000303778, ENSG00000267344, ENSG00000294490, ENSG00000236234, MIR4315-1, Metazoa_SRP, ENSG00000266918, RDM1P1, ENSG00000304996, ENSG00000285668, DND1P1, ENSG00000280022, MAPK8IP1P2, ENSG00000295828, RPS26P8, LINC02210, ENSG00000265547, SPPL2C, ENSG00000303280, ENSG00000303296, MAPT-IT1, Metazoa_SRP, STH, ENSG00000262372, KANSL1-AS1, Y_RNA, MAPK8IP1P1, ENSG00000305169, ENSG00000262539, ENSG00000291018, RN7SL656P, RDM1P2, RN7SL199P, FAM215B, LINC01180, MEIOC, CCDC43, DBF4B, ENSG00000307700, ADAM11, ENSG00000267405, ENSG00000267505, EFTUD2, GFAP, KIF18B, ENSG00000294432, DCAKD, PLCD3, ACBD4, HEXIM2-AS1, ENSG00000267288, FMNL1, MAP3K14-AS1, MAP3K14, ENSG00000267446, ARHGAP27, ENSG00000267198, ENSG00000291175, LRRC37A4P, LINC02210, ENSG00000306349, CRHR1, ENSG00000262881, ENSG00000305150, ARL17B, ENSG00000289729, LRRC37A, GJC1, FMNL1-DT, ENSG00000301815, PLEKHM1, LINC02210-CRHR1, MAPT-AS1, MAPT, ENSG00000305133, ENSG00000261575, ENSG00000294196, NSFP1, ARL17A, LRRC37A2, NMT1, KANSL1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020552 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 44668190 46590824 q21.31 ENSG00000267160, ENSG00000279879, RN7SL819P, RPL6P26, ENSG00000307712, HIGD1B, RN7SL405P, CCDC103, FAM187A, ENSG00000295646, MIR6783, KIF18B-DT, C1QL1, ENSG00000289024, ENSG00000267788, Y_RNA, MIR6784, ENSG00000276728, ENSG00000309064, HEXIM1, HEXIM2, FMNL1-AS1, ENSG00000293499, EFCAB15P, SPATA32, RNA5SP443, ENSG00000303778, ENSG00000267344, ENSG00000294490, ENSG00000236234, MIR4315-1, Metazoa_SRP, ENSG00000266918, RDM1P1, ENSG00000304996, ENSG00000285668, DND1P1, ENSG00000280022, MAPK8IP1P2, ENSG00000295828, RPS26P8, LINC02210, ENSG00000265547, SPPL2C, ENSG00000303280, ENSG00000303296, MAPT-IT1, Metazoa_SRP, STH, ENSG00000262372, KANSL1-AS1, Y_RNA, MAPK8IP1P1, ENSG00000305169, ENSG00000262539, ENSG00000291018, RN7SL656P, RDM1P2, RN7SL199P, FAM215B, MEIOC, CCDC43, DBF4B, ENSG00000307700, ADAM11, ENSG00000267405, ENSG00000267505, EFTUD2, GFAP, KIF18B, ENSG00000294432, DCAKD, PLCD3, ACBD4, HEXIM2-AS1, ENSG00000267288, FMNL1, MAP3K14-AS1, MAP3K14, ENSG00000267446, ARHGAP27, ENSG00000267198, ENSG00000291175, LRRC37A4P, LINC02210, ENSG00000306349, CRHR1, ENSG00000262881, ENSG00000305150, ARL17B, ENSG00000289729, LRRC37A, GJC1, FMNL1-DT, ENSG00000301815, PLEKHM1, LINC02210-CRHR1, MAPT-AS1, MAPT, ENSG00000305133, ENSG00000261575, ENSG00000294196, NSFP1, ARL17A, LRRC37A2, NSF, NMT1, KANSL1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020553 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 44722615 46645249 q21.31 ENSG00000307712, HIGD1B, RN7SL405P, CCDC103, FAM187A, ENSG00000295646, MIR6783, KIF18B-DT, C1QL1, ENSG00000289024, ENSG00000267788, Y_RNA, MIR6784, ENSG00000276728, ENSG00000309064, HEXIM1, HEXIM2, FMNL1-AS1, ENSG00000293499, EFCAB15P, SPATA32, RNA5SP443, ENSG00000303778, ENSG00000267344, ENSG00000294490, ENSG00000236234, MIR4315-1, Metazoa_SRP, ENSG00000266918, RDM1P1, ENSG00000304996, ENSG00000285668, DND1P1, ENSG00000280022, MAPK8IP1P2, ENSG00000295828, RPS26P8, LINC02210, ENSG00000265547, SPPL2C, ENSG00000303280, ENSG00000303296, MAPT-IT1, Metazoa_SRP, STH, ENSG00000262372, KANSL1-AS1, Y_RNA, MAPK8IP1P1, ENSG00000305169, ENSG00000262539, ENSG00000291018, RN7SL656P, RDM1P2, RN7SL199P, FAM215B, DBF4B, ENSG00000307700, ADAM11, ENSG00000267405, ENSG00000267505, EFTUD2, GFAP, KIF18B, ENSG00000294432, DCAKD, PLCD3, ACBD4, HEXIM2-AS1, ENSG00000267288, FMNL1, MAP3K14-AS1, MAP3K14, ENSG00000267446, ARHGAP27, ENSG00000267198, ENSG00000291175, LRRC37A4P, LINC02210, ENSG00000306349, CRHR1, ENSG00000262881, ENSG00000305150, ARL17B, ENSG00000289729, LRRC37A, GJC1, FMNL1-DT, ENSG00000301815, PLEKHM1, LINC02210-CRHR1, MAPT-AS1, MAPT, ENSG00000305133, ENSG00000261575, ENSG00000294196, NSFP1, ARL17A, LRRC37A2, NSF, NMT1, KANSL1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated