Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020564 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 40485933 42333915 q21.2 CCR7, ENSG00000296406, ENSG00000279775, KRT224P, ENSG00000300075, KRT24, ENSG00000291165, KRT223P, KRT25, KRT26, ENSG00000298797, ENSG00000264488, KRT10, KRT40, KRTAP3-3, KRTAP3-2, KRTAP3-4P, KRTAP1-5, KRTAP1-4, KRTAP1-3, KRTAP1-1, KRTAP2-1, KRTAP2-2, KRTAP2-3, KRTAP2-4, KRTAP2-5P, KRTAP4-7, KRTAP4-8, KRTAP4-16, KRTAP4-9, ENSG00000295967, KRTAP4-11, KRTAP4-5, KRTAP4-4, KRTAP4-3, KRTAP4-2, KRTAP4-1, KRTAP4-17P, KRTAP9-1, KRTAP9-12P, ENSG00000308912, KRTAP9-2, KRTAP9-3, KRTAP9-4, KRTAP9-9, KRTAP9-6, KRTAP9-11P, KRTAP9-7, KRTAP9-10P, KRTAP29-1, KRTAP16-1, KRTAP17-1, TBC1D3P7, ENSG00000307916, ENSG00000108516, KRT33A, KRT34, KRT31, KRT41P, KRT37, KRT38, KRT32, RNU2-32P, KRT35, KRT36, KRT13, ENSG00000229732, ENSG00000295342, MIR6510, ENSG00000310140, KRT19, ENSG00000310161, ENSG00000310122, ENSG00000296687, KRT17, ENSG00000289252, ENSG00000278954, ENSG00000309822, EIF1, RNA5SP442, RN7SL399P, ENSG00000309439, FKBP10, ENSG00000259623, ENSG00000298152, ENSG00000274630, ENSG00000297600, KAT2A, HCRT, ENSG00000280295, ENSG00000267758, ENSG00000278829, ENSG00000308596, ENSG00000266088, ENSG00000308563, ENSG00000278834, KRT222, ENSG00000300052, KRT27, KRT28, KRT10-AS1, KRT12, KRT20, ENSG00000234477, KRT23, KRT39, KRTAP3-1, ENSG00000287602, KRTAP4-12, KRTAP4-6, KRTAP9-8, ENSG00000307895, KRT33B, KRT43P, KRT15, KRT9, KRT14, KRT16, KRT42P, KRT42P, GAST, HAP1, JUP, NT5C3B, KLHL10, KLHL11, ACLY, CNP, DNAJC7, NKIRAS2, C17orf113, ENSG00000294424, DHX58, ENSG00000267261, HSPB9, RAB5C, RAB5C-AS1, KCNH4, GHDC, ENSG00000236194, STAT5A, TNS4, ENSG00000298565, SMARCE1, ENSG00000264058, ENSG00000306126, ENSG00000234859, LINC00974, ENSG00000309800, P3H4, ZNF385C, STAT5B, STAT3, ENSG00000265359, ODAD4 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020565 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 40485956 42333938 q21.2 CCR7, ENSG00000296406, ENSG00000279775, KRT224P, ENSG00000300075, KRT24, ENSG00000291165, KRT223P, KRT25, KRT26, ENSG00000298797, ENSG00000264488, KRT10, KRT40, KRTAP3-3, KRTAP3-2, KRTAP3-4P, KRTAP1-5, KRTAP1-4, KRTAP1-3, KRTAP1-1, KRTAP2-1, KRTAP2-2, KRTAP2-3, KRTAP2-4, KRTAP2-5P, KRTAP4-7, KRTAP4-8, KRTAP4-16, KRTAP4-9, ENSG00000295967, KRTAP4-11, KRTAP4-5, KRTAP4-4, KRTAP4-3, KRTAP4-2, KRTAP4-1, KRTAP4-17P, KRTAP9-1, KRTAP9-12P, ENSG00000308912, KRTAP9-2, KRTAP9-3, KRTAP9-4, KRTAP9-9, KRTAP9-6, KRTAP9-11P, KRTAP9-7, KRTAP9-10P, KRTAP29-1, KRTAP16-1, KRTAP17-1, TBC1D3P7, ENSG00000307916, ENSG00000108516, KRT33A, KRT34, KRT31, KRT41P, KRT37, KRT38, KRT32, RNU2-32P, KRT35, KRT36, KRT13, ENSG00000229732, ENSG00000295342, MIR6510, ENSG00000310140, KRT19, ENSG00000310161, ENSG00000310122, ENSG00000296687, KRT17, ENSG00000289252, ENSG00000278954, ENSG00000309822, EIF1, RNA5SP442, RN7SL399P, ENSG00000309439, FKBP10, ENSG00000259623, ENSG00000298152, ENSG00000274630, ENSG00000297600, KAT2A, HCRT, ENSG00000280295, ENSG00000267758, ENSG00000278829, ENSG00000308596, ENSG00000266088, ENSG00000308563, ENSG00000278834, KRT222, ENSG00000300052, KRT27, KRT28, KRT10-AS1, KRT12, KRT20, ENSG00000234477, KRT23, KRT39, KRTAP3-1, ENSG00000287602, KRTAP4-12, KRTAP4-6, KRTAP9-8, ENSG00000307895, KRT33B, KRT43P, KRT15, KRT9, KRT14, KRT16, KRT42P, KRT42P, GAST, HAP1, JUP, NT5C3B, KLHL10, KLHL11, ACLY, CNP, DNAJC7, NKIRAS2, C17orf113, ENSG00000294424, DHX58, ENSG00000267261, HSPB9, RAB5C, RAB5C-AS1, KCNH4, GHDC, ENSG00000236194, STAT5A, TNS4, ENSG00000298565, SMARCE1, ENSG00000264058, ENSG00000306126, ENSG00000234859, LINC00974, ENSG00000309800, P3H4, ZNF385C, STAT5B, STAT3, ENSG00000265359, ODAD4 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020566 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 40489104 42337086 q21.2 CCR7, ENSG00000296406, ENSG00000279775, KRT224P, ENSG00000300075, KRT24, ENSG00000291165, KRT223P, KRT25, KRT26, ENSG00000298797, ENSG00000264488, KRT10, KRT40, KRTAP3-3, KRTAP3-2, KRTAP3-4P, KRTAP1-5, KRTAP1-4, KRTAP1-3, KRTAP1-1, KRTAP2-1, KRTAP2-2, KRTAP2-3, KRTAP2-4, KRTAP2-5P, KRTAP4-7, KRTAP4-8, KRTAP4-16, KRTAP4-9, ENSG00000295967, KRTAP4-11, KRTAP4-5, KRTAP4-4, KRTAP4-3, KRTAP4-2, KRTAP4-1, KRTAP4-17P, KRTAP9-1, KRTAP9-12P, ENSG00000308912, KRTAP9-2, KRTAP9-3, KRTAP9-4, KRTAP9-9, KRTAP9-6, KRTAP9-11P, KRTAP9-7, KRTAP9-10P, KRTAP29-1, KRTAP16-1, KRTAP17-1, TBC1D3P7, ENSG00000307916, ENSG00000108516, KRT33A, KRT34, KRT31, KRT41P, KRT37, KRT38, KRT32, RNU2-32P, KRT35, KRT36, KRT13, ENSG00000229732, ENSG00000295342, MIR6510, ENSG00000310140, KRT19, ENSG00000310161, ENSG00000310122, ENSG00000296687, KRT17, ENSG00000289252, ENSG00000278954, ENSG00000309822, EIF1, RNA5SP442, RN7SL399P, ENSG00000309439, FKBP10, ENSG00000259623, ENSG00000298152, ENSG00000274630, ENSG00000297600, KAT2A, HCRT, ENSG00000280295, ENSG00000267758, ENSG00000278829, ENSG00000308596, ENSG00000266088, ENSG00000308563, ENSG00000278834, KRT222, ENSG00000300052, KRT27, KRT28, KRT10-AS1, KRT12, KRT20, ENSG00000234477, KRT23, KRT39, KRTAP3-1, ENSG00000287602, KRTAP4-12, KRTAP4-6, KRTAP9-8, ENSG00000307895, KRT33B, KRT43P, KRT15, KRT9, KRT14, KRT16, KRT42P, KRT42P, GAST, HAP1, JUP, NT5C3B, KLHL10, KLHL11, ACLY, CNP, DNAJC7, NKIRAS2, C17orf113, ENSG00000294424, DHX58, ENSG00000267261, HSPB9, RAB5C, RAB5C-AS1, KCNH4, GHDC, ENSG00000236194, STAT5A, TNS4, ENSG00000298565, SMARCE1, ENSG00000264058, ENSG00000306126, ENSG00000234859, LINC00974, ENSG00000309800, P3H4, ZNF385C, STAT5B, STAT3, ENSG00000265359, ODAD4 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020567 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr18 29050781 31470818 q12.1 ENSG00000266479, MIR302F, ENSG00000305381, ENSG00000279734, RNU6-857P, RNU6-167P, Y_RNA, ENSG00000302833, ENSG00000264587, ENSG00000287803, ENSG00000295305, ENSG00000266196, ENSG00000265670, DSC3, DSC1, ENSG00000310241, ENSG00000293651, DSG1-AS1, DSG4, ENSG00000302813, ENSG00000304402, ENSG00000295284, DSC2, DSCAS, DSG1, ENSG00000265980, ENSG00000286605, DSG3 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020568 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr4 59421469 60287187 q13.1 Y_RNA, Y_RNA, RNU6-1325P, ENSG00000283043, ENSG00000249392, ENSG00000287174, ENSG00000249892 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020569 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr5 18890458 18890567 p14.3 - Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020570 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 119973390 120294536 q22.31 MIR3144, ENSG00000308468 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020571 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr6 120929781 121250927 q22.31 TBC1D32 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020572 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr7 130798117 131113358 q32.2,q32.3 ENSG00000229858, H4P1, ENSG00000309987, MIR29A, MIR29B1, ENSG00000310053, ENSG00000310108, ENSG00000310087, ENSG00000271204, ENSG00000310026, RNU6-1010P, ENSG00000232716, LINC00513, MKLN1, LINC-PINT Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020573 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr9 72708599 75323515 q21.13 RPS27AP15, LINC01474, ENSG00000297622, ENSG00000293877, ENSG00000293857, ENSG00000293896, DPP3P2, ENSG00000299511, ENSG00000236701, RNA5SP286, ENSG00000223368, ENSG00000286944, RN7SKP47, RPSAP75, RNU6-445P, ENSG00000224297, C9orf40, ENSG00000229587, ENSG00000278040, ENSG00000308426, Y_RNA, RNU6-1228P, ENSG00000302339, CYP1D1P, ANXA1, ENSG00000293609, ENSG00000303250, ENSG00000227809, ENSG00000308887, CARNMT1, NMRK1, ENSG00000308405, TMC1, ALDH1A1, ENSG00000293607, ENSG00000232590, ENSG00000286840, ENSG00000293610, ENSG00000305891, ENSG00000303235, RORB, TRPM6, CARNMT1-AS1, OSTF1, ENSG00000293608, RORB-AS1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated