Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 1788
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000264709; ENSP00000264709; ENSG00000119772. [Q9Y6K1-1]
Genome annotation databasesEnsembl ENST00000321117; ENSP00000324375; ENSG00000119772. [Q9Y6K1-1]
Genome annotation databasesEnsembl ENST00000380746; ENSP00000370122; ENSG00000119772. [Q9Y6K1-2]
Genome annotation databasesEnsembl ENST00000402667; ENSP00000384237; ENSG00000119772.
Genome annotation databasesEnsembl ENST00000406659; ENSP00000384852; ENSG00000119772. [Q9Y6K1-3]
Genome annotation databasesGeneID 1788; -.
Genome annotation databasesKEGG hsa:1788; -.
Genome annotation databasesUCSC uc002rgc.4; human. [Q9Y6K1-1]
Genome annotation databasesUCSC uc002rgf.3; human. [Q9Y6K1-3]
Sequence databasesCCDS CCDS1718.2; -. [Q9Y6K1-2]
Sequence databasesCCDS CCDS33157.1; -. [Q9Y6K1-1]
Sequence databasesCCDS CCDS46232.1; -. [Q9Y6K1-3]
Sequence databasesEMBL AF067972; AAD33084.2; -; mRNA.
Sequence databasesEMBL AF480163; AAN40037.1; ALT_INIT; mRNA.
Sequence databasesEMBL AF331856; AAL57039.1; ALT_INIT; mRNA.
Sequence databasesEMBL AC012074; AAY14761.1; -; Genomic_DNA.
Sequence databasesEMBL CH471053; EAX00727.1; -; Genomic_DNA.
Sequence databasesEMBL BC032392; AAH32392.1; -; mRNA.
Sequence databasesEMBL BC043617; AAH43617.1; -; mRNA.
Sequence databasesEMBL BC051864; AAH51864.1; -; mRNA.
Sequence databasesRefSeq NP_072046.2; NM_022552.4. [Q9Y6K1-1]
Sequence databasesRefSeq NP_715640.2; NM_153759.3. [Q9Y6K1-2]
Sequence databasesRefSeq NP_783328.1; NM_175629.2. [Q9Y6K1-1]
Sequence databasesRefSeq NP_783329.1; NM_175630.1. [Q9Y6K1-3]
Sequence databasesRefSeq XP_005264232.1; XM_005264175.2. [Q9Y6K1-1]
Sequence databasesRefSeq XP_005264233.1; XM_005264176.1. [Q9Y6K1-1]
Sequence databasesRefSeq XP_005264234.1; XM_005264177.2.
Sequence databasesUniGene Hs.515840; -.
Polymorphism databasesDMDM 166215081; -.
Gene expression databasesBgee Q9Y6K1; -.
Gene expression databasesCleanEx HS_DNMT3A; -.
Gene expression databasesExpressionAtlas Q9Y6K1; baseline and differential.
Gene expression databasesGenevestigator Q9Y6K1; -.
OntologiesGO GO:0000775; C:chromosome, centromeric region; IEA:Ensembl.
OntologiesGO GO:0005737; C:cytoplasm; IDA:UniProtKB.
OntologiesGO GO:0000791; C:euchromatin; IDA:UniProtKB.
OntologiesGO GO:0005720; C:nuclear heterochromatin; IEA:Ensembl.
OntologiesGO GO:0016363; C:nuclear matrix; IDA:UniProtKB.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0003682; F:chromatin binding; IEA:Ensembl.
OntologiesGO GO:0003886; F:DNA (cytosine-5-)-methyltransferase activity; IDA:UniProtKB.
OntologiesGO GO:0051718; F:DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates; IEA:Ensembl.
OntologiesGO GO:0003677; F:DNA binding; IDA:UniProtKB.
OntologiesGO GO:0042802; F:identical protein binding; IPI:IntAct.
OntologiesGO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
OntologiesGO GO:0045322; F:unmethylated CpG binding; IEA:Ensembl.
OntologiesGO GO:0090116; P:C-5 methylation of cytosine; IDA:GOC.
OntologiesGO GO:0071230; P:cellular response to amino acid stimulus; IEA:Ensembl.
OntologiesGO GO:0006306; P:DNA methylation; IDA:UniProtKB.
OntologiesGO GO:0043045; P:DNA methylation involved in embryo development; IEA:Ensembl.
OntologiesGO GO:0043046; P:DNA methylation involved in gamete generation; IEA:Ensembl.
OntologiesGO GO:0010424; P:DNA methylation on cytosine within a CG sequence; IEA:Ensembl.
OntologiesGO GO:0044027; P:hypermethylation of CpG island; IEA:Ensembl.
OntologiesGO GO:0006346; P:methylation-dependent chromatin silencing; IEA:Ensembl.
OntologiesGO GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Ensembl.
OntologiesGO GO:0006349; P:regulation of gene expression by genetic imprinting; TAS:UniProtKB.
OntologiesGO GO:0046498; P:S-adenosylhomocysteine metabolic process; IEA:Ensembl.
OntologiesGO GO:0046499; P:S-adenosylmethioninamine metabolic process; IEA:Ensembl.
OntologiesGO GO:0007283; P:spermatogenesis; IEA:Ensembl.
Proteomic databasesMaxQB Q9Y6K1; -.
Proteomic databasesPaxDb Q9Y6K1; -.
Proteomic databasesPRIDE Q9Y6K1; -.
Protein family/group databasesREBASE 4119; M.HsaDnmt3A.
Family and domain databasesGene3D 3.40.50.150; -; 1.
Family and domain databasesInterPro IPR025766; ADD.
Family and domain databasesInterPro IPR018117; C5_DNA_meth_AS.
Family and domain databasesInterPro IPR001525; C5_MeTfrase.
Family and domain databasesInterPro IPR025811; C5_MeTrfase_3.
Family and domain databasesInterPro IPR000313; PWWP_dom.
Family and domain databasesInterPro IPR029063; SAM-dependent_MTases-like.
Family and domain databasesPfam PF00145; DNA_methylase; 1.
Family and domain databasesPfam PF00855; PWWP; 1.
Family and domain databasesPROSITE PS51533; ADD; 1.
Family and domain databasesPROSITE PS00094; C5_MTASE_1; 1.
Family and domain databasesPROSITE PS50812; PWWP; 1.
Family and domain databasesPROSITE PS51679; SAM_MT_C5; 1.
Family and domain databasesSMART SM00293; PWWP; 1.
Family and domain databasesSUPFAM SSF53335; SSF53335; 1.
PTM databasesPhosphoSite Q9Y6K1; -.
Protein-protein interaction databasesBioGrid 108125; 53.
Protein-protein interaction databasesDIP DIP-38004N; -.
Protein-protein interaction databasesIntAct Q9Y6K1; 20.
Protein-protein interaction databasesSTRING 9606.ENSP00000264709; -.
Enzyme and pathway databasesBRENDA 2.1.1.37; 2681.
Enzyme and pathway databasesReactome REACT_200808; PRC2 methylates histones and DNA.
Enzyme and pathway databasesReactome REACT_228108; RMTs methylate histone arginines.
Enzyme and pathway databasesReactome REACT_267652; DNA methylation.
3D structure databasesPDB 2QRV; X-ray; 2.89 A; A/D/E/H=627-912.
3D structure databasesPDB 3A1A; X-ray; 2.30 A; A=476-614.
3D structure databasesPDB 3A1B; X-ray; 2.29 A; A=476-614.
3D structure databasesPDB 3LLR; X-ray; 2.30 A; A/B/C/D/E=275-427.
3D structure databasesPDB 3SVM; X-ray; 2.31 A; P=40-53.
3D structure databasesPDBsum 2QRV; -.
3D structure databasesPDBsum 3A1A; -.
3D structure databasesPDBsum 3A1B; -.
3D structure databasesPDBsum 3LLR; -.
3D structure databasesPDBsum 3SVM; -.
3D structure databasesProteinModelPortal Q9Y6K1; -.
3D structure databasesSMR Q9Y6K1; 283-425, 475-912.
Protocols and materials databasesDNASU 1788; -.
Phylogenomic databaseseggNOG NOG70699; -.
Phylogenomic databasesGeneTree ENSGT00390000008341; -.
Phylogenomic databasesHOGENOM HOG000230875; -.
Phylogenomic databasesHOVERGEN HBG051381; -.
Phylogenomic databasesInParanoid Q9Y6K1; -.
Phylogenomic databasesKO K17398; -.
Phylogenomic databasesOMA FVGGMCQ; -.
Phylogenomic databasesOrthoDB EOG7MWGW6; -.
Phylogenomic databasesPhylomeDB Q9Y6K1; -.
Phylogenomic databasesTreeFam TF329039; -.
Organism-specific databasesCTD 1788; -.
Organism-specific databasesGeneCards GC02M025455; -.
Organism-specific databasesHGNC HGNC:2978; DNMT3A.
Organism-specific databasesHPA CAB009469; -.
Organism-specific databasesHPA HPA026588; -.
Organism-specific databasesMIM 602769; gene.
Organism-specific databasesMIM 615879; phenotype.
Organism-specific databasesneXtProt NX_Q9Y6K1; -.
Organism-specific databasesOrphanet 404443; Tall stature-intellectual disability-facial dysmorphism syndrome.
Organism-specific databasesPharmGKB PA27445; -.
ChemistryBindingDB Q9Y6K1; -.
ChemistryChEMBL CHEMBL3137291; -.
OtherChiTaRS DNMT3A; human.
OtherEvolutionaryTrace Q9Y6K1; -.
OtherGenomeRNAi 1788; -.
OtherNextBio 7279; -.
OtherPRO PR:Q9Y6K1; -.



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