Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 189
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000307503; ENSP00000302620; ENSG00000172482.
Genome annotation databasesGeneID 189; -.
Genome annotation databasesKEGG hsa:189; -.
Genome annotation databasesUCSC uc002waa.4; human.
Sequence databasesCCDS CCDS2543.1; -.
Sequence databasesEMBL X56092; CAA39572.1; -; mRNA.
Sequence databasesEMBL X53414; CAA37493.1; -; mRNA.
Sequence databasesEMBL D13368; BAA02632.1; -; mRNA.
Sequence databasesEMBL M61763; AAA51680.1; -; Genomic_DNA.
Sequence databasesEMBL AK292754; BAF85443.1; -; mRNA.
Sequence databasesEMBL AC104809; AAY24168.1; -; Genomic_DNA.
Sequence databasesEMBL CH471063; EAW71222.1; -; Genomic_DNA.
Sequence databasesEMBL BC132819; AAI32820.1; -; mRNA.
Sequence databasesPIR I39419; XNHUSP.
Sequence databasesRefSeq NP_000021.1; NM_000030.2.
Sequence databasesUniGene Hs.144567; -.
Polymorphism databasesDMDM 134855; -.
Gene expression databasesBgee P21549; -.
Gene expression databasesCleanEx HS_AGXT; -.
Gene expression databasesGenevestigator P21549; -.
OntologiesGO GO:0005759; C:mitochondrial matrix; IEA:Ensembl.
OntologiesGO GO:0005782; C:peroxisomal matrix; IDA:UniProtKB.
OntologiesGO GO:0005777; C:peroxisome; IDA:UniProtKB.
OntologiesGO GO:0008453; F:alanine-glyoxylate transaminase activity; IDA:UniProtKB.
OntologiesGO GO:0016597; F:amino acid binding; IDA:UniProtKB.
OntologiesGO GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
OntologiesGO GO:0030170; F:pyridoxal phosphate binding; IDA:UniProtKB.
OntologiesGO GO:0005102; F:receptor binding; IPI:UniProtKB.
OntologiesGO GO:0004760; F:serine-pyruvate transaminase activity; IEA:UniProtKB-EC.
OntologiesGO GO:0008483; F:transaminase activity; IDA:UniProtKB.
OntologiesGO GO:0034641; P:cellular nitrogen compound metabolic process; TAS:Reactome.
OntologiesGO GO:0019265; P:glycine biosynthetic process, by transamination of glyoxylate; IDA:UniProtKB.
OntologiesGO GO:0009436; P:glyoxylate catabolic process; IDA:UniProtKB.
OntologiesGO GO:0046487; P:glyoxylate metabolic process; IMP:HGNC.
OntologiesGO GO:0042853; P:L-alanine catabolic process; IDA:UniProtKB.
OntologiesGO GO:0019448; P:L-cysteine catabolic process; IDA:UniProtKB.
OntologiesGO GO:0046724; P:oxalic acid secretion; IEA:Ensembl.
OntologiesGO GO:0042866; P:pyruvate biosynthetic process; IEA:Ensembl.
OntologiesGO GO:0051591; P:response to cAMP; IEA:Ensembl.
OntologiesGO GO:0051384; P:response to glucocorticoid; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB P21549; -.
Proteomic databasesPaxDb P21549; -.
Proteomic databasesPeptideAtlas P21549; -.
Proteomic databasesPRIDE P21549; -.
Family and domain databasesGene3D 3.40.640.10; -; 1.
Family and domain databasesGene3D 3.90.1150.10; -; 1.
Family and domain databasesInterPro IPR000192; Aminotrans_V_dom.
Family and domain databasesInterPro IPR020578; Aminotrans_V_PyrdxlP_BS.
Family and domain databasesInterPro IPR015424; PyrdxlP-dep_Trfase.
Family and domain databasesInterPro IPR015421; PyrdxlP-dep_Trfase_major_sub1.
Family and domain databasesInterPro IPR015422; PyrdxlP-dep_Trfase_major_sub2.
Family and domain databasesInterPro IPR024169; SP_NH2Trfase/AEP_transaminase.
Family and domain databasesPfam PF00266; Aminotran_5; 1.
Family and domain databasesPIRSF PIRSF000524; SPT; 1.
Family and domain databasesPROSITE PS00595; AA_TRANSFER_CLASS_5; 1.
Family and domain databasesSUPFAM SSF53383; SSF53383; 1.
PTM databasesPhosphoSite P21549; -.
Protein-protein interaction databasesBioGrid 106694; 4.
Protein-protein interaction databasesDIP DIP-59650N; -.
Protein-protein interaction databasesIntAct P21549; 2.
Protein-protein interaction databasesMINT MINT-1419187; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000302620; -.
Enzyme and pathway databasesBioCyc MetaCyc:HS10525-MONOMER; -.
Enzyme and pathway databasesBRENDA 2.6.1.44; 2681.
Enzyme and pathway databasesReactome REACT_16925; Glyoxylate metabolism.
3D structure databasesPDB 1H0C; X-ray; 2.50 A; A=1-392.
3D structure databasesPDB 1J04; X-ray; 2.60 A; A=1-392.
3D structure databasesPDB 2YOB; X-ray; 1.90 A; A/B=1-388.
3D structure databasesPDB 3R9A; X-ray; 2.35 A; A/C=1-392.
3D structure databasesPDB 4CBR; X-ray; 2.30 A; A=1-392.
3D structure databasesPDB 4CBS; X-ray; 2.30 A; A=1-392.
3D structure databasesPDB 4I8A; X-ray; 2.90 A; A/B/C/D=1-392.
3D structure databasesPDBsum 1H0C; -.
3D structure databasesPDBsum 1J04; -.
3D structure databasesPDBsum 2YOB; -.
3D structure databasesPDBsum 3R9A; -.
3D structure databasesPDBsum 4CBR; -.
3D structure databasesPDBsum 4CBS; -.
3D structure databasesPDBsum 4I8A; -.
3D structure databasesProteinModelPortal P21549; -.
3D structure databasesSMR P21549; 4-392.
Phylogenomic databaseseggNOG COG0075; -.
Phylogenomic databasesGeneTree ENSGT00390000006648; -.
Phylogenomic databasesHOGENOM HOG000171815; -.
Phylogenomic databasesHOVERGEN HBG006907; -.
Phylogenomic databasesInParanoid P21549; -.
Phylogenomic databasesKO K00830; -.
Phylogenomic databasesOMA HKYNCLL; -.
Phylogenomic databasesOrthoDB EOG7CZK6B; -.
Phylogenomic databasesPhylomeDB P21549; -.
Phylogenomic databasesTreeFam TF313234; -.
Organism-specific databasesCTD 189; -.
Organism-specific databasesGeneCards GC02P241807; -.
Organism-specific databasesGeneReviews AGXT; -.
Organism-specific databasesHGNC HGNC:341; AGXT.
Organism-specific databasesHPA HPA035370; -.
Organism-specific databasesHPA HPA035371; -.
Organism-specific databasesMIM 259900; phenotype.
Organism-specific databasesMIM 604285; gene.
Organism-specific databasesneXtProt NX_P21549; -.
Organism-specific databasesOrphanet 93598; Primary hyperoxaluria type 1.
Organism-specific databasesPharmGKB PA24633; -.
ChemistryDrugBank DB00145; Glycine.
ChemistryDrugBank DB00160; L-Alanine.
ChemistryDrugBank DB00133; L-Serine.
OtherEvolutionaryTrace P21549; -.
OtherGeneWiki AGXT; -.
OtherGenomeRNAi 189; -.
OtherNextBio 772; -.
OtherPRO PR:P21549; -.



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