Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 633
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000331595; ENSP00000327336; ENSG00000182492.
Genome annotation databasesGeneID 633; -.
Genome annotation databasesKEGG hsa:633; -.
Genome annotation databasesUCSC uc004fhr.2; human.
Sequence databasesCCDS CCDS14721.1; -.
Sequence databasesEMBL J04599; AAA36009.1; -; mRNA.
Sequence databasesEMBL M65153; AAA52287.1; ALT_SEQ; Genomic_DNA.
Sequence databasesEMBL M65152; AAA52287.1; JOINED; Genomic_DNA.
Sequence databasesEMBL U82695; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL BT007323; AAP35987.1; -; mRNA.
Sequence databasesEMBL CH471172; EAW72863.1; -; Genomic_DNA.
Sequence databasesEMBL CH471172; EAW72864.1; -; Genomic_DNA.
Sequence databasesEMBL BC002416; AAH02416.1; -; mRNA.
Sequence databasesEMBL BC004244; AAH04244.1; -; mRNA.
Sequence databasesEMBL U11686; AAC50117.1; -; mRNA.
Sequence databasesPIR A40757; BGHUN.
Sequence databasesRefSeq NP_001702.1; NM_001711.4.
Sequence databasesUniGene Hs.821; -.
Polymorphism databasesDMDM 266762; -.
Gene expression databasesBgee P21810; -.
Gene expression databasesCleanEx HS_BGN; -.
Gene expression databasesExpressionAtlas P21810; baseline and differential.
Gene expression databasesGenevestigator P21810; -.
OntologiesGO GO:0009986; C:cell surface; IDA:MGI.
OntologiesGO GO:0005576; C:extracellular region; TAS:Reactome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProtKB.
OntologiesGO GO:0005796; C:Golgi lumen; TAS:Reactome.
OntologiesGO GO:0043202; C:lysosomal lumen; TAS:Reactome.
OntologiesGO GO:0005578; C:proteinaceous extracellular matrix; NAS:UniProtKB.
OntologiesGO GO:0042383; C:sarcolemma; IEA:Ensembl.
OntologiesGO GO:0030133; C:transport vesicle; IDA:LIFEdb.
OntologiesGO GO:0050840; F:extracellular matrix binding; IEA:Ensembl.
OntologiesGO GO:0005201; F:extracellular matrix structural constituent; NAS:UniProtKB.
OntologiesGO GO:0005539; F:glycosaminoglycan binding; IEA:Ensembl.
OntologiesGO GO:0001974; P:blood vessel remodeling; IEA:Ensembl.
OntologiesGO GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.
OntologiesGO GO:0030206; P:chondroitin sulfate biosynthetic process; TAS:Reactome.
OntologiesGO GO:0030207; P:chondroitin sulfate catabolic process; TAS:Reactome.
OntologiesGO GO:0030204; P:chondroitin sulfate metabolic process; TAS:Reactome.
OntologiesGO GO:0030208; P:dermatan sulfate biosynthetic process; TAS:Reactome.
OntologiesGO GO:0030198; P:extracellular matrix organization; TAS:Reactome.
OntologiesGO GO:0030203; P:glycosaminoglycan metabolic process; TAS:Reactome.
OntologiesGO GO:0019800; P:peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB P21810; -.
Proteomic databasesPaxDb P21810; -.
Proteomic databasesPRIDE P21810; -.
Family and domain databasesInterPro IPR028547; Biglycan.
Family and domain databasesInterPro IPR001611; Leu-rich_rpt.
Family and domain databasesInterPro IPR000372; LRR-contain_N.
Family and domain databasesInterPro IPR016352; SLRP_I_decor/aspor/byglycan.
Family and domain databasesPANTHER PTHR24369:SF6; PTHR24369:SF6; 1.
Family and domain databasesPfam PF13855; LRR_8; 3.
Family and domain databasesPfam PF01462; LRRNT; 1.
Family and domain databasesPIRSF PIRSF002490; SLRP_I; 1.
Family and domain databasesPROSITE PS51450; LRR; 8.
Family and domain databasesSMART SM00013; LRRNT; 1.
PTM databasesPhosphoSite P21810; -.
Protein-protein interaction databasesBioGrid 107102; 9.
Protein-protein interaction databasesIntAct P21810; 13.
Protein-protein interaction databasesMINT MINT-4529946; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000327336; -.
Enzyme and pathway databasesReactome REACT_120800; Dermatan sulfate biosynthesis.
Enzyme and pathway databasesReactome REACT_120888; CS/DS degradation.
Enzyme and pathway databasesReactome REACT_120989; Chondroitin sulfate biosynthesis.
Enzyme and pathway databasesReactome REACT_121408; A tetrasaccharide linker sequence is required for GAG synthesis.
Enzyme and pathway databasesReactome REACT_163906; ECM proteoglycans.
Enzyme and pathway databasesReactome REACT_267642; Defective CHST14 causes EDS, musculocontractural type.
Enzyme and pathway databasesReactome REACT_267659; Defective B3GAT3 causes JDSSDHD.
Enzyme and pathway databasesReactome REACT_267682; Defective CHSY1 causes TPBS.
Enzyme and pathway databasesReactome REACT_267708; Defective CHST3 causes SEDCJD.
Enzyme and pathway databasesReactome REACT_267711; Defective B4GALT7 causes EDS, progeroid type.
3D structure databasesProteinModelPortal P21810; -.
3D structure databasesSMR P21810; 61-365.
Protocols and materials databasesDNASU 633; -.
Phylogenomic databaseseggNOG COG4886; -.
Phylogenomic databasesGeneTree ENSGT00760000118969; -.
Phylogenomic databasesHOGENOM HOG000261690; -.
Phylogenomic databasesHOVERGEN HBG016052; -.
Phylogenomic databasesInParanoid P21810; -.
Phylogenomic databasesKO K08118; -.
Phylogenomic databasesOMA IQFGNYK; -.
Phylogenomic databasesPhylomeDB P21810; -.
Phylogenomic databasesTreeFam TF334562; -.
Organism-specific databasesCTD 633; -.
Organism-specific databasesGeneCards GC0XP152762; -.
Organism-specific databasesHGNC HGNC:1044; BGN.
Organism-specific databasesHPA CAB003678; -.
Organism-specific databasesHPA HPA003157; -.
Organism-specific databasesMIM 301870; gene.
Organism-specific databasesneXtProt NX_P21810; -.
Organism-specific databasesPharmGKB PA25346; -.
OtherChiTaRS BGN; human.
OtherGeneWiki Biglycan; -.
OtherGenomeRNAi 633; -.
OtherNextBio 2558; -.
OtherPMAP-CutDB P21810; -.
OtherPRO PR:P21810; -.



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