Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 811
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000316448; ENSP00000320866; ENSG00000179218.
Genome annotation databasesGeneID 811; -.
Genome annotation databasesKEGG hsa:811; -.
Genome annotation databasesUCSC uc002mvu.2; human.
Sequence databasesCCDS CCDS12288.1; -.
Sequence databasesEMBL M32294; AAA36582.1; -; mRNA.
Sequence databasesEMBL M84739; AAA51916.1; -; mRNA.
Sequence databasesEMBL AY047586; AAL13126.1; -; mRNA.
Sequence databasesEMBL AB451408; BAG70222.1; -; mRNA.
Sequence databasesEMBL BT007448; AAP36116.1; -; mRNA.
Sequence databasesEMBL CR457070; CAG33351.1; -; mRNA.
Sequence databasesEMBL AD000092; AAB51176.1; -; Genomic_DNA.
Sequence databasesEMBL CH471106; EAW84331.1; -; Genomic_DNA.
Sequence databasesEMBL BC002500; AAH02500.1; -; mRNA.
Sequence databasesEMBL BC007911; AAH07911.1; -; mRNA.
Sequence databasesEMBL BC020493; AAH20493.1; -; mRNA.
Sequence databasesPIR A42330; A37047.
Sequence databasesRefSeq NP_004334.1; NM_004343.3.
Sequence databasesUniGene Hs.515162; -.
Polymorphism databasesDMDM 117501; -.
Gene expression databasesBgee P27797; -.
Gene expression databasesCleanEx HS_CALR; -.
Gene expression databasesExpressionAtlas P27797; baseline and differential.
Gene expression databasesGenevestigator P27797; -.
OntologiesGO GO:0001669; C:acrosomal vesicle; IEA:Ensembl.
OntologiesGO GO:0009986; C:cell surface; TAS:BHF-UCL.
OntologiesGO GO:0005737; C:cytoplasm; IDA:BHF-UCL.
OntologiesGO GO:0005829; C:cytosol; IDA:UniProtKB.
OntologiesGO GO:0071682; C:endocytic vesicle lumen; TAS:Reactome.
OntologiesGO GO:0005783; C:endoplasmic reticulum; TAS:UniProtKB.
OntologiesGO GO:0005788; C:endoplasmic reticulum lumen; IDA:UniProtKB.
OntologiesGO GO:0009897; C:external side of plasma membrane; IEA:Ensembl.
OntologiesGO GO:0005576; C:extracellular region; TAS:Reactome.
OntologiesGO GO:0005615; C:extracellular space; IDA:BHF-UCL.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0005925; C:focal adhesion; IDA:UniProtKB.
OntologiesGO GO:0005794; C:Golgi apparatus; IEA:Ensembl.
OntologiesGO GO:0071556; C:integral component of lumenal side of endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0005622; C:intracellular; TAS:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0042824; C:MHC class I peptide loading complex; ISS:BHF-UCL.
OntologiesGO GO:0005634; C:nucleus; IDA:BHF-UCL.
OntologiesGO GO:0048471; C:perinuclear region of cytoplasm; IDA:BHF-UCL.
OntologiesGO GO:0005844; C:polysome; ISS:BHF-UCL.
OntologiesGO GO:0005578; C:proteinaceous extracellular matrix; IEA:UniProtKB-KW.
OntologiesGO GO:0016529; C:sarcoplasmic reticulum; IEA:UniProtKB-KW.
OntologiesGO GO:0050681; F:androgen receptor binding; IDA:BHF-UCL.
OntologiesGO GO:0005509; F:calcium ion binding; ISS:UniProtKB.
OntologiesGO GO:0030246; F:carbohydrate binding; TAS:BHF-UCL.
OntologiesGO GO:0051087; F:chaperone binding; TAS:BHF-UCL.
OntologiesGO GO:0001849; F:complement component C1q binding; TAS:BHF-UCL.
OntologiesGO GO:0003677; F:DNA binding; NAS:UniProtKB.
OntologiesGO GO:0001948; F:glycoprotein binding; IPI:UniProt.
OntologiesGO GO:0042562; F:hormone binding; IEA:Ensembl.
OntologiesGO GO:0005178; F:integrin binding; IPI:BHF-UCL.
OntologiesGO GO:0005506; F:iron ion binding; IEA:Ensembl.
OntologiesGO GO:0003729; F:mRNA binding; IDA:BHF-UCL.
OntologiesGO GO:0042277; F:peptide binding; IEA:Ensembl.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0044183; F:protein binding involved in protein folding; TAS:BHF-UCL.
OntologiesGO GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
OntologiesGO GO:0051082; F:unfolded protein binding; TAS:BHF-UCL.
OntologiesGO GO:0008270; F:zinc ion binding; TAS:BHF-UCL.
OntologiesGO GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.
OntologiesGO GO:0042590; P:antigen processing and presentation of exogenous peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.
OntologiesGO GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.
OntologiesGO GO:0055007; P:cardiac muscle cell differentiation; IEA:Ensembl.
OntologiesGO GO:0007050; P:cell cycle arrest; IGI:BHF-UCL.
OntologiesGO GO:0006874; P:cellular calcium ion homeostasis; TAS:UniProtKB.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0071285; P:cellular response to lithium ion; IEA:Ensembl.
OntologiesGO GO:0090398; P:cellular senescence; IGI:BHF-UCL.
OntologiesGO GO:0061077; P:chaperone-mediated protein folding; IEA:Ensembl.
OntologiesGO GO:0030866; P:cortical actin cytoskeleton organization; IEA:Ensembl.
OntologiesGO GO:0030968; P:endoplasmic reticulum unfolded protein response; TAS:Reactome.
OntologiesGO GO:0042921; P:glucocorticoid receptor signaling pathway; TAS:BHF-UCL.
OntologiesGO GO:0033144; P:negative regulation of intracellular steroid hormone receptor signaling pathway; IDA:BHF-UCL.
OntologiesGO GO:0045665; P:negative regulation of neuron differentiation; IDA:BHF-UCL.
OntologiesGO GO:0048387; P:negative regulation of retinoic acid receptor signaling pathway; IDA:BHF-UCL.
OntologiesGO GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.
OntologiesGO GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:BHF-UCL.
OntologiesGO GO:0017148; P:negative regulation of translation; ISS:BHF-UCL.
OntologiesGO GO:0002502; P:peptide antigen assembly with MHC class I protein complex; ISS:BHF-UCL.
OntologiesGO GO:0045787; P:positive regulation of cell cycle; IGI:BHF-UCL.
OntologiesGO GO:0008284; P:positive regulation of cell proliferation; IGI:BHF-UCL.
OntologiesGO GO:2000510; P:positive regulation of dendritic cell chemotaxis; IMP:UniProtKB.
OntologiesGO GO:0045740; P:positive regulation of DNA replication; IGI:BHF-UCL.
OntologiesGO GO:0010628; P:positive regulation of gene expression; IEA:Ensembl.
OntologiesGO GO:0050766; P:positive regulation of phagocytosis; ISS:BHF-UCL.
OntologiesGO GO:1900026; P:positive regulation of substrate adhesion-dependent cell spreading; IMP:UniProtKB.
OntologiesGO GO:0043687; P:post-translational protein modification; TAS:Reactome.
OntologiesGO GO:0006611; P:protein export from nucleus; IDA:UniProtKB.
OntologiesGO GO:0006457; P:protein folding; TAS:BHF-UCL.
OntologiesGO GO:0034504; P:protein localization to nucleus; IDA:UniProtKB.
OntologiesGO GO:0022417; P:protein maturation by protein folding; TAS:BHF-UCL.
OntologiesGO GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.
OntologiesGO GO:0050821; P:protein stabilization; ISS:UniProtKB.
OntologiesGO GO:0042981; P:regulation of apoptotic process; TAS:UniProtKB.
OntologiesGO GO:0040020; P:regulation of meiosis; IEA:Ensembl.
OntologiesGO GO:0006355; P:regulation of transcription, DNA-templated; TAS:ProtInc.
OntologiesGO GO:0042493; P:response to drug; IEA:Ensembl.
OntologiesGO GO:0032355; P:response to estradiol; IEA:Ensembl.
OntologiesGO GO:0033574; P:response to testosterone; IEA:Ensembl.
OntologiesGO GO:0051208; P:sequestering of calcium ion; TAS:BHF-UCL.
OntologiesGO GO:0007283; P:spermatogenesis; IEA:Ensembl.
Proteomic databasesMaxQB P27797; -.
Proteomic databasesPaxDb P27797; -.
Proteomic databasesPRIDE P27797; -.
Family and domain databasesGene3D 2.60.120.200; -; 2.
Family and domain databasesInterPro IPR001580; Calret/calnex.
Family and domain databasesInterPro IPR018124; Calret/calnex_CS.
Family and domain databasesInterPro IPR009169; Calreticulin.
Family and domain databasesInterPro IPR009033; Calreticulin/calnexin_P_dom.
Family and domain databasesInterPro IPR013320; ConA-like_dom.
Family and domain databasesPANTHER PTHR11073; PTHR11073; 1.
Family and domain databasesPfam PF00262; Calreticulin; 1.
Family and domain databasesPIRSF PIRSF002356; Calreticulin; 1.
Family and domain databasesPRINTS PR00626; CALRETICULIN.
Family and domain databasesPROSITE PS00803; CALRETICULIN_1; 1.
Family and domain databasesPROSITE PS00804; CALRETICULIN_2; 1.
Family and domain databasesPROSITE PS00805; CALRETICULIN_REPEAT; 3.
Family and domain databasesPROSITE PS00014; ER_TARGET; 1.
Family and domain databasesSUPFAM SSF49899; SSF49899; 1.
Family and domain databasesSUPFAM SSF63887; SSF63887; 1.
PTM databasesPhosphoSite P27797; -.
Protein-protein interaction databasesBioGrid 107262; 85.
Protein-protein interaction databasesDIP DIP-104N; -.
Protein-protein interaction databasesIntAct P27797; 29.
Protein-protein interaction databasesMINT MINT-101756; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000320866; -.
Enzyme and pathway databasesReactome REACT_111178; ER-Phagosome pathway.
Enzyme and pathway databasesReactome REACT_163699; Scavenging by Class A Receptors.
Enzyme and pathway databasesReactome REACT_163813; Scavenging by Class F Receptors.
Enzyme and pathway databasesReactome REACT_18423; ATF6-alpha activates chaperone genes.
Enzyme and pathway databasesReactome REACT_23810; Calnexin/calreticulin cycle.
Enzyme and pathway databasesReactome REACT_6277; Assembly of Viral Components at the Budding Site.
Enzyme and pathway databasesReactome REACT_75795; Antigen Presentation: Folding, assembly and peptide loading of class I MHC.
2D gel databasesDOSAC-COBS-2DPAGE P27797; -.
2D gel databasesOGP P27797; -.
2D gel databasesREPRODUCTION-2DPAGE IPI00020599; -.
2D gel databasesSWISS-2DPAGE P27797; -.
2D gel databasesUCD-2DPAGE P27797; -.
3D structure databasesDisProt DP00333; -.
3D structure databasesPDB 2CLR; X-ray; 2.00 A; C/F=1-10.
3D structure databasesPDB 3DOW; X-ray; 2.30 A; B=195-205.
3D structure databasesPDB 3POS; X-ray; 1.65 A; A/B/C=18-204, A/B/C=302-368.
3D structure databasesPDB 3POW; X-ray; 1.55 A; A=18-204, A=302-368.
3D structure databasesPDBsum 2CLR; -.
3D structure databasesPDBsum 3DOW; -.
3D structure databasesPDBsum 3POS; -.
3D structure databasesPDBsum 3POW; -.
3D structure databasesProteinModelPortal P27797; -.
3D structure databasesSMR P27797; 18-367.
Protocols and materials databasesDNASU 811; -.
Phylogenomic databaseseggNOG NOG305105; -.
Phylogenomic databasesHOGENOM HOG000192435; -.
Phylogenomic databasesHOVERGEN HBG005407; -.
Phylogenomic databasesInParanoid P27797; -.
Phylogenomic databasesKO K08057; -.
Phylogenomic databasesOMA VKLFPDG; -.
Phylogenomic databasesOrthoDB EOG77126Z; -.
Phylogenomic databasesPhylomeDB P27797; -.
Phylogenomic databasesTreeFam TF338438; -.
Organism-specific databasesCTD 811; -.
Organism-specific databasesGeneCards GC19P013049; -.
Organism-specific databasesHGNC HGNC:1455; CALR.
Organism-specific databasesHPA CAB001513; -.
Organism-specific databasesHPA CAB019952; -.
Organism-specific databasesHPA HPA002242; -.
Organism-specific databasesMIM 109091; gene.
Organism-specific databasesneXtProt NX_P27797; -.
Organism-specific databasesOrphanet 3318; Essential thrombocythemia.
Organism-specific databasesOrphanet 824; Myelofibrosis with myeloid metaplasia.
Organism-specific databasesPharmGKB PA26046; -.
ChemistryDrugBank DB00025; Antihemophilic Factor.
ChemistryDrugBank DB01065; Melatonin.
ChemistryDrugBank DB00031; Tenecteplase.
OtherChiTaRS CALR; human.
OtherEvolutionaryTrace P27797; -.
OtherGeneWiki Calreticulin; -.
OtherGenomeRNAi 811; -.
OtherNextBio 3292; -.
OtherPRO PR:P27797; -.



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