Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 9575
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000309964; ENSP00000308741; ENSG00000134852.
Genome annotation databasesEnsembl ENST00000381322; ENSP00000370723; ENSG00000134852.
Genome annotation databasesEnsembl ENST00000513440; ENSP00000426983; ENSG00000134852.
Genome annotation databasesGeneID 9575; -.
Genome annotation databasesKEGG hsa:9575; -.
Genome annotation databasesUCSC uc003haz.2; human.
Sequence databasesCCDS CCDS3500.1; -.
Sequence databasesEMBL AF011568; AAB83969.1; -; mRNA.
Sequence databasesEMBL AH008440; AAF13733.1; -; Genomic_DNA.
Sequence databasesEMBL EF015897; ABM64208.1; -; Genomic_DNA.
Sequence databasesEMBL AB002332; BAA20792.2; ALT_INIT; mRNA.
Sequence databasesEMBL AK291708; BAF84397.1; -; mRNA.
Sequence databasesEMBL BC126157; AAI26158.1; -; mRNA.
Sequence databasesEMBL BC126159; AAI26160.1; -; mRNA.
Sequence databasesEMBL AB005535; BAA21774.1; -; mRNA.
Sequence databasesRefSeq NP_001254772.1; NM_001267843.1.
Sequence databasesRefSeq NP_004889.1; NM_004898.3.
Sequence databasesRefSeq XP_005265844.1; XM_005265787.1.
Sequence databasesRefSeq XP_006714117.1; XM_006714054.1.
Sequence databasesUniGene Hs.436975; -.
Sequence databasesUniGene Hs.689578; -.
Gene expression databasesBgee O15516; -.
Gene expression databasesCleanEx HS_CLOCK; -.
Gene expression databasesExpressionAtlas O15516; baseline and differential.
Gene expression databasesGenevestigator O15516; -.
OntologiesGO GO:0033391; C:chromatoid body; ISS:UniProtKB.
OntologiesGO GO:0005694; C:chromosome; IDA:UniProtKB.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0005667; C:transcription factor complex; IPI:MGI.
OntologiesGO GO:0031490; F:chromatin DNA binding; ISS:UniProtKB.
OntologiesGO GO:0001047; F:core promoter binding; ISS:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; IDA:UniProtKB.
OntologiesGO GO:0070888; F:E-box binding; IDA:UniProtKB.
OntologiesGO GO:0004402; F:histone acetyltransferase activity; IMP:UniProtKB.
OntologiesGO GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.
OntologiesGO GO:0000982; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity; ISS:BHF-UCL.
OntologiesGO GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; ISS:BHF-UCL.
OntologiesGO GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.
OntologiesGO GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
OntologiesGO GO:0004871; F:signal transducer activity; IEA:InterPro.
OntologiesGO GO:0071479; P:cellular response to ionizing radiation; IDA:UniProtKB.
OntologiesGO GO:0006325; P:chromatin organization; TAS:Reactome.
OntologiesGO GO:0032922; P:circadian regulation of gene expression; IDA:UniProtKB.
OntologiesGO GO:0007623; P:circadian rhythm; TAS:ProtInc.
OntologiesGO GO:0000077; P:DNA damage checkpoint; IMP:UniProtKB.
OntologiesGO GO:0016573; P:histone acetylation; IMP:GOC.
OntologiesGO GO:2000323; P:negative regulation of glucocorticoid receptor signaling pathway; ISS:UniProtKB.
OntologiesGO GO:0045892; P:negative regulation of transcription, DNA-templated; ISS:UniProtKB.
OntologiesGO GO:0009648; P:photoperiodism; TAS:ProtInc.
OntologiesGO GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:UniProtKB.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.
OntologiesGO GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
OntologiesGO GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
OntologiesGO GO:0042634; P:regulation of hair cycle; IMP:UniProtKB.
OntologiesGO GO:0050796; P:regulation of insulin secretion; ISS:UniProtKB.
OntologiesGO GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
OntologiesGO GO:0006355; P:regulation of transcription, DNA-templated; ISS:UniProtKB.
OntologiesGO GO:2000074; P:regulation of type B pancreatic cell development; ISS:UniProtKB.
OntologiesGO GO:0051775; P:response to redox state; IDA:UniProtKB.
OntologiesGO GO:0007165; P:signal transduction; TAS:ProtInc.
OntologiesGO GO:0007283; P:spermatogenesis; ISS:UniProtKB.
Proteomic databasesMaxQB O15516; -.
Proteomic databasesPaxDb O15516; -.
Proteomic databasesPRIDE O15516; -.
Family and domain databasesGene3D 4.10.280.10; -; 1.
Family and domain databasesInterPro IPR011598; bHLH_dom.
Family and domain databasesInterPro IPR001067; Nuc_translocat.
Family and domain databasesInterPro IPR001610; PAC.
Family and domain databasesInterPro IPR000014; PAS.
Family and domain databasesInterPro IPR013767; PAS_fold.
Family and domain databasesPfam PF00010; HLH; 1.
Family and domain databasesPfam PF00989; PAS; 1.
Family and domain databasesPRINTS PR00785; NCTRNSLOCATR.
Family and domain databasesPROSITE PS50888; BHLH; 1.
Family and domain databasesPROSITE PS50112; PAS; 2.
Family and domain databasesSMART SM00353; HLH; 1.
Family and domain databasesSMART SM00086; PAC; 1.
Family and domain databasesSMART SM00091; PAS; 2.
Family and domain databasesSUPFAM SSF47459; SSF47459; 1.
Family and domain databasesSUPFAM SSF55785; SSF55785; 2.
PTM databasesPhosphoSite O15516; -.
Protein-protein interaction databasesBioGrid 114944; 19.
Protein-protein interaction databasesDIP DIP-46009N; -.
Protein-protein interaction databasesIntAct O15516; 3.
Protein-protein interaction databasesSTRING 9606.ENSP00000308741; -.
Enzyme and pathway databasesReactome REACT_111118; BMAL1:CLOCK,NPAS2 activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_116145; PPARA activates gene expression.
Enzyme and pathway databasesReactome REACT_118659; RORA activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_118789; REV-ERBA represses gene expression.
Enzyme and pathway databasesReactome REACT_172610; HATs acetylate histones.
Enzyme and pathway databasesReactome REACT_24941; Circadian Clock.
3D structure databasesPDB 4H10; X-ray; 2.40 A; B=29-89.
3D structure databasesPDBsum 4H10; -.
3D structure databasesProteinModelPortal O15516; -.
3D structure databasesSMR O15516; 31-444.
Protocols and materials databasesDNASU 9575; -.
Phylogenomic databaseseggNOG NOG300360; -.
Phylogenomic databasesGeneTree ENSGT00760000118788; -.
Phylogenomic databasesHOGENOM HOG000234382; -.
Phylogenomic databasesHOVERGEN HBG050997; -.
Phylogenomic databasesInParanoid O15516; -.
Phylogenomic databasesKO K02223; -.
Phylogenomic databasesOMA TPINMQG; -.
Phylogenomic databasesOrthoDB EOG71G9T7; -.
Phylogenomic databasesPhylomeDB O15516; -.
Phylogenomic databasesTreeFam TF324568; -.
Organism-specific databasesCTD 9575; -.
Organism-specific databasesGeneCards GC04M056294; -.
Organism-specific databasesHGNC HGNC:2082; CLOCK.
Organism-specific databasesHPA HPA001867; -.
Organism-specific databasesHPA HPA027565; -.
Organism-specific databasesMIM 601851; gene.
Organism-specific databasesneXtProt NX_O15516; -.
Organism-specific databasesPharmGKB PA26609; -.
OtherChiTaRS CLOCK; human.
OtherGeneWiki CLOCK; -.
OtherGenomeRNAi 9575; -.
OtherNextBio 35907; -.
OtherPRO PR:O15516; -.



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