Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 4850
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000315544; ENSP00000326731; ENSG00000080802. [O95628-1]
Genome annotation databasesEnsembl ENST00000361528; ENSP00000354673; ENSG00000080802. [O95628-8]
Genome annotation databasesEnsembl ENST00000414802; ENSP00000416532; ENSG00000080802. [O95628-5]
Genome annotation databasesEnsembl ENST00000423368; ENSP00000406777; ENSG00000080802. [O95628-4]
Genome annotation databasesEnsembl ENST00000428680; ENSP00000399108; ENSG00000080802. [O95628-2]
Genome annotation databasesEnsembl ENST00000451834; ENSP00000388491; ENSG00000080802. [O95628-9]
Genome annotation databasesEnsembl ENST00000541284; ENSP00000445508; ENSG00000080802. [O95628-10]
Genome annotation databasesGeneID 4850; -.
Genome annotation databasesKEGG hsa:4850; -.
Genome annotation databasesUCSC uc003vss.3; human. [O95628-8]
Genome annotation databasesUCSC uc003vst.3; human. [O95628-4]
Genome annotation databasesUCSC uc003vsu.2; human. [O95628-2]
Genome annotation databasesUCSC uc003vsv.2; human. [O95628-1]
Sequence databasesCCDS CCDS43650.1; -. [O95628-8]
Sequence databasesCCDS CCDS47719.1; -. [O95628-2]
Sequence databasesCCDS CCDS55164.1; -. [O95628-4]
Sequence databasesCCDS CCDS55165.1; -. [O95628-10]
Sequence databasesCCDS CCDS55166.1; -. [O95628-1]
Sequence databasesCCDS CCDS55167.1; -. [O95628-9]
Sequence databasesEMBL U71267; AAD00179.1; ALT_FRAME; mRNA.
Sequence databasesEMBL U71268; AAD00180.1; ALT_FRAME; mRNA.
Sequence databasesEMBL AF180475; AAF29829.1; -; mRNA.
Sequence databasesEMBL AL389980; CAB97536.1; -; mRNA.
Sequence databasesEMBL AK074671; BAC11125.1; ALT_INIT; mRNA.
Sequence databasesEMBL AK300365; BAH13270.1; -; mRNA.
Sequence databasesEMBL AC083871; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC074002; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL BC035590; AAH35590.1; -; mRNA.
Sequence databasesEMBL AF091094; AAC72963.1; ALT_SEQ; mRNA.
Sequence databasesRefSeq NP_001008226.1; NM_001008225.2. [O95628-2]
Sequence databasesRefSeq NP_001177776.1; NM_001190847.1. [O95628-4]
Sequence databasesRefSeq NP_001177777.1; NM_001190848.1. [O95628-1]
Sequence databasesRefSeq NP_001177778.1; NM_001190849.1. [O95628-9]
Sequence databasesRefSeq NP_001177779.1; NM_001190850.1. [O95628-10]
Sequence databasesRefSeq NP_037448.2; NM_013316.3. [O95628-8]
Sequence databasesUniGene Hs.490224; -.
Gene expression databasesBgee O95628; -.
Gene expression databasesCleanEx HS_CNOT4; -.
Gene expression databasesGenevestigator O95628; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IEA:UniProtKB-KW.
OntologiesGO GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0000166; F:nucleotide binding; IEA:InterPro.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0004842; F:ubiquitin-protein transferase activity; IDA:UniProtKB.
OntologiesGO GO:0008270; F:zinc ion binding; IEA:InterPro.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; TAS:Reactome.
OntologiesGO GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.
OntologiesGO GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
Proteomic databasesMaxQB O95628; -.
Proteomic databasesPaxDb O95628; -.
Proteomic databasesPRIDE O95628; -.
Family and domain databasesGene3D 3.30.40.10; -; 1.
Family and domain databasesGene3D 3.30.70.330; -; 1.
Family and domain databasesInterPro IPR012677; Nucleotide-bd_a/b_plait.
Family and domain databasesInterPro IPR000504; RRM_dom.
Family and domain databasesInterPro IPR000571; Znf_CCCH.
Family and domain databasesInterPro IPR001841; Znf_RING.
Family and domain databasesInterPro IPR013083; Znf_RING/FYVE/PHD.
Family and domain databasesPROSITE PS50102; RRM; 1.
Family and domain databasesPROSITE PS50103; ZF_C3H1; 1.
Family and domain databasesPROSITE PS50089; ZF_RING_2; 1.
Family and domain databasesSMART SM00184; RING; 1.
Family and domain databasesSMART SM00360; RRM; 1.
PTM databasesPhosphoSite O95628; -.
Protein-protein interaction databasesBioGrid 110912; 17.
Protein-protein interaction databasesIntAct O95628; 9.
Protein-protein interaction databasesSTRING 9606.ENSP00000354673; -.
Enzyme and pathway databasesReactome REACT_20514; Deadenylation of mRNA.
Enzyme and pathway databasesUniPathway UPA00143; -.
3D structure databasesPDB 1E4U; NMR; -; A=1-78.
3D structure databasesPDB 1UR6; NMR; -; B=12-63.
3D structure databasesPDBsum 1E4U; -.
3D structure databasesPDBsum 1UR6; -.
3D structure databasesProteinModelPortal O95628; -.
3D structure databasesSMR O95628; 1-78, 103-198.
Phylogenomic databaseseggNOG COG5175; -.
Phylogenomic databasesGeneTree ENSGT00390000000068; -.
Phylogenomic databasesHOVERGEN HBG051043; -.
Phylogenomic databasesInParanoid O95628; -.
Phylogenomic databasesKO K10643; -.
Phylogenomic databasesOMA KNPVPDQ; -.
Phylogenomic databasesOrthoDB EOG790G0K; -.
Phylogenomic databasesPhylomeDB O95628; -.
Phylogenomic databasesTreeFam TF106134; -.
Organism-specific databasesCTD 4850; -.
Organism-specific databasesGeneCards GC07M135046; -.
Organism-specific databasesH-InvDB HIX0007112; -.
Organism-specific databasesHGNC HGNC:7880; CNOT4.
Organism-specific databasesHPA HPA005737; -.
Organism-specific databasesMIM 604911; gene.
Organism-specific databasesneXtProt NX_O95628; -.
Organism-specific databasesPharmGKB PA26675; -.
OtherEvolutionaryTrace O95628; -.
OtherGenomeRNAi 4850; -.
OtherNextBio 18678; -.
OtherPRO PR:O95628; -.
Genome annotation databasesEnsembl ENST00000315544; ENSP00000326731; ENSG00000080802. [O95628-1]
Genome annotation databasesEnsembl ENST00000361528; ENSP00000354673; ENSG00000080802. [O95628-8]
Genome annotation databasesEnsembl ENST00000414802; ENSP00000416532; ENSG00000080802. [O95628-5]
Genome annotation databasesEnsembl ENST00000423368; ENSP00000406777; ENSG00000080802. [O95628-4]
Genome annotation databasesEnsembl ENST00000428680; ENSP00000399108; ENSG00000080802. [O95628-2]
Genome annotation databasesEnsembl ENST00000451834; ENSP00000388491; ENSG00000080802. [O95628-9]
Genome annotation databasesEnsembl ENST00000541284; ENSP00000445508; ENSG00000080802. [O95628-10]
Genome annotation databasesGeneID 4850; -.
Genome annotation databasesKEGG hsa:4850; -.
Genome annotation databasesUCSC uc003vss.3; human. [O95628-8]
Genome annotation databasesUCSC uc003vst.3; human. [O95628-4]
Genome annotation databasesUCSC uc003vsu.2; human. [O95628-2]
Genome annotation databasesUCSC uc003vsv.2; human. [O95628-1]
Sequence databasesCCDS CCDS43650.1; -. [O95628-8]
Sequence databasesCCDS CCDS47719.1; -. [O95628-2]
Sequence databasesCCDS CCDS55164.1; -. [O95628-4]
Sequence databasesCCDS CCDS55165.1; -. [O95628-10]
Sequence databasesCCDS CCDS55166.1; -. [O95628-1]
Sequence databasesCCDS CCDS55167.1; -. [O95628-9]
Sequence databasesEMBL U71267; AAD00179.1; ALT_FRAME; mRNA.
Sequence databasesEMBL U71268; AAD00180.1; ALT_FRAME; mRNA.
Sequence databasesEMBL AF180475; AAF29829.1; -; mRNA.
Sequence databasesEMBL AL389980; CAB97536.1; -; mRNA.
Sequence databasesEMBL AK074671; BAC11125.1; ALT_INIT; mRNA.
Sequence databasesEMBL AK300365; BAH13270.1; -; mRNA.
Sequence databasesEMBL AC083871; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC074002; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL BC035590; AAH35590.1; -; mRNA.
Sequence databasesEMBL AF091094; AAC72963.1; ALT_SEQ; mRNA.
Sequence databasesRefSeq NP_001008226.1; NM_001008225.2. [O95628-2]
Sequence databasesRefSeq NP_001177776.1; NM_001190847.1. [O95628-4]
Sequence databasesRefSeq NP_001177777.1; NM_001190848.1. [O95628-1]
Sequence databasesRefSeq NP_001177778.1; NM_001190849.1. [O95628-9]
Sequence databasesRefSeq NP_001177779.1; NM_001190850.1. [O95628-10]
Sequence databasesRefSeq NP_037448.2; NM_013316.3. [O95628-8]
Sequence databasesUniGene Hs.490224; -.
Gene expression databasesBgee O95628; -.
Gene expression databasesCleanEx HS_CNOT4; -.
Gene expression databasesGenevestigator O95628; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IEA:UniProtKB-KW.
OntologiesGO GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0000166; F:nucleotide binding; IEA:InterPro.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0004842; F:ubiquitin-protein transferase activity; IDA:UniProtKB.
OntologiesGO GO:0008270; F:zinc ion binding; IEA:InterPro.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; TAS:Reactome.
OntologiesGO GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.
OntologiesGO GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
Proteomic databasesMaxQB O95628; -.
Proteomic databasesPaxDb O95628; -.
Proteomic databasesPRIDE O95628; -.
Family and domain databasesGene3D 3.30.40.10; -; 1.
Family and domain databasesGene3D 3.30.70.330; -; 1.
Family and domain databasesInterPro IPR012677; Nucleotide-bd_a/b_plait.
Family and domain databasesInterPro IPR000504; RRM_dom.
Family and domain databasesInterPro IPR000571; Znf_CCCH.
Family and domain databasesInterPro IPR001841; Znf_RING.
Family and domain databasesInterPro IPR013083; Znf_RING/FYVE/PHD.
Family and domain databasesPROSITE PS50102; RRM; 1.
Family and domain databasesPROSITE PS50103; ZF_C3H1; 1.
Family and domain databasesPROSITE PS50089; ZF_RING_2; 1.
Family and domain databasesSMART SM00184; RING; 1.
Family and domain databasesSMART SM00360; RRM; 1.
PTM databasesPhosphoSite O95628; -.
Protein-protein interaction databasesBioGrid 110912; 17.
Protein-protein interaction databasesIntAct O95628; 9.
Protein-protein interaction databasesSTRING 9606.ENSP00000354673; -.
Enzyme and pathway databasesReactome REACT_20514; Deadenylation of mRNA.
Enzyme and pathway databasesUniPathway UPA00143; -.
3D structure databasesPDB 1E4U; NMR; -; A=1-78.
3D structure databasesPDB 1UR6; NMR; -; B=12-63.
3D structure databasesPDBsum 1E4U; -.
3D structure databasesPDBsum 1UR6; -.
3D structure databasesProteinModelPortal O95628; -.
3D structure databasesSMR O95628; 1-78, 103-198.
Phylogenomic databaseseggNOG COG5175; -.
Phylogenomic databasesGeneTree ENSGT00390000000068; -.
Phylogenomic databasesHOVERGEN HBG051043; -.
Phylogenomic databasesInParanoid O95628; -.
Phylogenomic databasesKO K10643; -.
Phylogenomic databasesOMA KNPVPDQ; -.
Phylogenomic databasesOrthoDB EOG790G0K; -.
Phylogenomic databasesPhylomeDB O95628; -.
Phylogenomic databasesTreeFam TF106134; -.
Organism-specific databasesCTD 4850; -.
Organism-specific databasesGeneCards GC07M135046; -.
Organism-specific databasesH-InvDB HIX0007112; -.
Organism-specific databasesHGNC HGNC:7880; CNOT4.
Organism-specific databasesHPA HPA005737; -.
Organism-specific databasesMIM 604911; gene.
Organism-specific databasesneXtProt NX_O95628; -.
Organism-specific databasesPharmGKB PA26675; -.
OtherEvolutionaryTrace O95628; -.
OtherGenomeRNAi 4850; -.
OtherNextBio 18678; -.
OtherPRO PR:O95628; -.



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