Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 2719
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000370818; ENSP00000359854; ENSG00000147257. [P51654-1]
Genome annotation databasesEnsembl ENST00000394299; ENSP00000377836; ENSG00000147257. [P51654-3]
Genome annotation databasesGeneID 2719; -.
Genome annotation databasesKEGG hsa:2719; -.
Genome annotation databasesUCSC uc004exe.2; human. [P51654-1]
Genome annotation databasesUCSC uc010nro.2; human.
Sequence databasesCCDS CCDS14638.1; -. [P51654-1]
Sequence databasesCCDS CCDS55496.1; -. [P51654-3]
Sequence databasesEMBL U50410; AAA93471.1; -; mRNA.
Sequence databasesEMBL L47124; AAA98131.1; -; Genomic_DNA.
Sequence databasesEMBL L47125; AAA98132.1; -; mRNA.
Sequence databasesEMBL L47176; AAB58806.1; -; mRNA.
Sequence databasesEMBL Z37987; CAA86069.1; -; mRNA.
Sequence databasesEMBL DQ349136; ABC72125.1; -; mRNA.
Sequence databasesEMBL DQ349138; ABC72127.1; -; mRNA.
Sequence databasesEMBL AL008712; CAI43110.1; -; Genomic_DNA.
Sequence databasesEMBL AC002420; CAI43110.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF003529; CAI43110.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL009174; CAI43110.1; JOINED; Genomic_DNA.
Sequence databasesEMBL Z99570; CAI43110.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL009174; CAI42761.1; -; Genomic_DNA.
Sequence databasesEMBL AC002420; CAI42761.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF003529; CAI42761.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL008712; CAI42761.1; JOINED; Genomic_DNA.
Sequence databasesEMBL Z99570; CAI42761.1; JOINED; Genomic_DNA.
Sequence databasesEMBL Z99570; CAI42277.1; -; Genomic_DNA.
Sequence databasesEMBL AC002420; CAI42277.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AF003529; CAI42277.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL008712; CAI42277.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL009174; CAI42277.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL034401; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AL662851; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL Z97196; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471107; EAX11771.1; -; Genomic_DNA.
Sequence databasesEMBL AF003529; AAB87062.1; -; Genomic_DNA.
Sequence databasesRefSeq NP_001158089.1; NM_001164617.1. [P51654-3]
Sequence databasesRefSeq NP_001158091.1; NM_001164619.1. [P51654-2]
Sequence databasesRefSeq NP_004475.1; NM_004484.3. [P51654-1]
Sequence databasesUniGene Hs.644108; -.
Polymorphism databasesDMDM 1708022; -.
Gene expression databasesBgee P51654; -.
Gene expression databasesCleanEx HS_GPC3; -.
Gene expression databasesExpressionAtlas P51654; baseline and differential.
Gene expression databasesGenevestigator P51654; -.
OntologiesGO GO:0046658; C:anchored component of plasma membrane; IEA:Ensembl.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0005796; C:Golgi lumen; TAS:Reactome.
OntologiesGO GO:0005887; C:integral component of plasma membrane; TAS:ProtInc.
OntologiesGO GO:0043202; C:lysosomal lumen; TAS:Reactome.
OntologiesGO GO:0005886; C:plasma membrane; TAS:Reactome.
OntologiesGO GO:0005578; C:proteinaceous extracellular matrix; IEA:InterPro.
OntologiesGO GO:0060422; F:peptidyl-dipeptidase inhibitor activity; IDA:UniProtKB.
OntologiesGO GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.
OntologiesGO GO:0009948; P:anterior/posterior axis specification; IEA:Ensembl.
OntologiesGO GO:0010171; P:body morphogenesis; IEA:Ensembl.
OntologiesGO GO:0030282; P:bone mineralization; IEA:Ensembl.
OntologiesGO GO:0001658; P:branching involved in ureteric bud morphogenesis; IEA:Ensembl.
OntologiesGO GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.
OntologiesGO GO:0072203; P:cell proliferation involved in metanephros development; IEA:Ensembl.
OntologiesGO GO:0030204; P:chondroitin sulfate metabolic process; TAS:Reactome.
OntologiesGO GO:0060976; P:coronary vasculature development; IEA:Ensembl.
OntologiesGO GO:0035116; P:embryonic hindlimb morphogenesis; IEA:Ensembl.
OntologiesGO GO:0006024; P:glycosaminoglycan biosynthetic process; TAS:Reactome.
OntologiesGO GO:0006027; P:glycosaminoglycan catabolic process; TAS:Reactome.
OntologiesGO GO:0030203; P:glycosaminoglycan metabolic process; TAS:Reactome.
OntologiesGO GO:0030324; P:lung development; IEA:Ensembl.
OntologiesGO GO:0072138; P:mesenchymal cell proliferation involved in ureteric bud development; ISS:UniProtKB.
OntologiesGO GO:0072180; P:mesonephric duct morphogenesis; IEA:Ensembl.
OntologiesGO GO:0090090; P:negative regulation of canonical Wnt signaling pathway; IEA:Ensembl.
OntologiesGO GO:0050680; P:negative regulation of epithelial cell proliferation; IEA:Ensembl.
OntologiesGO GO:0045926; P:negative regulation of growth; IEA:Ensembl.
OntologiesGO GO:0045879; P:negative regulation of smoothened signaling pathway; IEA:Ensembl.
OntologiesGO GO:0030316; P:osteoclast differentiation; IEA:Ensembl.
OntologiesGO GO:0007603; P:phototransduction, visible light; TAS:Reactome.
OntologiesGO GO:0030513; P:positive regulation of BMP signaling pathway; IEA:Ensembl.
OntologiesGO GO:0045807; P:positive regulation of endocytosis; IEA:Ensembl.
OntologiesGO GO:0046326; P:positive regulation of glucose import; IEA:Ensembl.
OntologiesGO GO:0045732; P:positive regulation of protein catabolic process; IEA:Ensembl.
OntologiesGO GO:0045880; P:positive regulation of smoothened signaling pathway; IEA:Ensembl.
OntologiesGO GO:2000096; P:positive regulation of Wnt signaling pathway, planar cell polarity pathway; IEA:Ensembl.
OntologiesGO GO:0001523; P:retinoid metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB P51654; -.
Proteomic databasesPaxDb P51654; -.
Proteomic databasesPRIDE P51654; -.
Family and domain databasesInterPro IPR001863; Glypican.
Family and domain databasesInterPro IPR015501; Glypican-3.
Family and domain databasesInterPro IPR019803; Glypican_CS.
Family and domain databasesPANTHER PTHR10822; PTHR10822; 1.
Family and domain databasesPANTHER PTHR10822:SF4; PTHR10822:SF4; 1.
Family and domain databasesPfam PF01153; Glypican; 1.
Family and domain databasesPROSITE PS01207; GLYPICAN; 1.
PTM databasesPhosphoSite P51654; -.
Protein-protein interaction databasesBioGrid 108983; 7.
Protein-protein interaction databasesIntAct P51654; 1.
Protein-protein interaction databasesSTRING 9606.ENSP00000359854; -.
Enzyme and pathway databasesReactome REACT_120752; HS-GAG degradation.
Enzyme and pathway databasesReactome REACT_121248; HS-GAG biosynthesis.
Enzyme and pathway databasesReactome REACT_121408; A tetrasaccharide linker sequence is required for GAG synthesis.
Enzyme and pathway databasesReactome REACT_24968; Retinoid metabolism and transport.
Enzyme and pathway databasesReactome REACT_267654; Defective EXT2 causes exostoses 2.
Enzyme and pathway databasesReactome REACT_267659; Defective B3GAT3 causes JDSSDHD.
Enzyme and pathway databasesReactome REACT_267674; Defective EXT1 causes exostoses 1, TRPS2 and CHDS.
Enzyme and pathway databasesReactome REACT_267711; Defective B4GALT7 causes EDS, progeroid type.
Enzyme and pathway databasesSignaLink P51654; -.
3D structure databasesProteinModelPortal P51654; -.
3D structure databasesSMR P51654; 34-475.
Protocols and materials databasesDNASU 2719; -.
Phylogenomic databaseseggNOG NOG281821; -.
Phylogenomic databasesGeneTree ENSGT00550000074430; -.
Phylogenomic databasesHOVERGEN HBG005896; -.
Phylogenomic databasesInParanoid P51654; -.
Phylogenomic databasesKO K08109; -.
Phylogenomic databasesOMA CWNGQEL; -.
Phylogenomic databasesOrthoDB EOG761BTG; -.
Phylogenomic databasesPhylomeDB P51654; -.
Phylogenomic databasesTreeFam TF105317; -.
Organism-specific databasesCTD 2719; -.
Organism-specific databasesGeneCards GC0XM132669; -.
Organism-specific databasesGeneReviews GPC3; -.
Organism-specific databasesHGNC HGNC:4451; GPC3.
Organism-specific databasesHPA CAB017784; -.
Organism-specific databasesHPA HPA006316; -.
Organism-specific databasesMIM 300037; gene.
Organism-specific databasesMIM 312870; phenotype.
Organism-specific databasesneXtProt NX_P51654; -.
Organism-specific databasesOrphanet 373; Simpson-Golabi-Behmel syndrome.
Organism-specific databasesPharmGKB PA28832; -.
OtherChiTaRS GPC3; human.
OtherGeneWiki Glypican_3; -.
OtherGenomeRNAi 2719; -.
OtherNextBio 10734; -.
OtherPRO PR:P51654; -.



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