Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 2262
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000377067; ENSP00000366267; ENSG00000179399.
Genome annotation databasesGeneID 2262; -.
Genome annotation databasesKEGG hsa:2262; -.
Genome annotation databasesUCSC uc010tif.2; human.
Sequence databasesCCDS CCDS9468.1; -.
Sequence databasesEMBL U66033; AAC51118.1; -; mRNA.
Sequence databasesEMBL AF001462; AAC12261.1; -; mRNA.
Sequence databasesEMBL AK312815; BAG35673.1; -; mRNA.
Sequence databasesEMBL AL157363; CAH71865.1; -; Genomic_DNA.
Sequence databasesEMBL AL162456; CAH71865.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL163537; CAH71865.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157821; CAH71865.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL138714; CAH71865.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL138714; CAH70260.1; -; Genomic_DNA.
Sequence databasesEMBL AL157821; CAH70260.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL163537; CAH70260.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162456; CAH70260.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157363; CAH70260.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157821; CAC34558.2; -; Genomic_DNA.
Sequence databasesEMBL AL157363; CAC34558.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL163537; CAC34558.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162456; CAC34558.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL138714; CAC34558.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL163537; CAI13232.1; -; Genomic_DNA.
Sequence databasesEMBL AL138714; CAI13232.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162456; CAI13232.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157821; CAI13232.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157363; CAI13232.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162456; CAI17090.1; -; Genomic_DNA.
Sequence databasesEMBL AL163537; CAI17090.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157821; CAI17090.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL157363; CAI17090.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL138714; CAI17090.1; JOINED; Genomic_DNA.
Sequence databasesEMBL BC039730; AAH39730.1; -; mRNA.
Sequence databasesRefSeq NP_004457.1; NM_004466.5.
Sequence databasesUniGene Hs.655675; -.
Polymorphism databasesDMDM 2829667; -.
Gene expression databasesBgee P78333; -.
Gene expression databasesCleanEx HS_GPC5; -.
Gene expression databasesGenevestigator P78333; -.
OntologiesGO GO:0031225; C:anchored component of membrane; IEA:UniProtKB-KW.
OntologiesGO GO:0005796; C:Golgi lumen; TAS:Reactome.
OntologiesGO GO:0005887; C:integral component of plasma membrane; TAS:ProtInc.
OntologiesGO GO:0043202; C:lysosomal lumen; TAS:Reactome.
OntologiesGO GO:0005886; C:plasma membrane; TAS:Reactome.
OntologiesGO GO:0005578; C:proteinaceous extracellular matrix; IEA:InterPro.
OntologiesGO GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.
OntologiesGO GO:0030204; P:chondroitin sulfate metabolic process; TAS:Reactome.
OntologiesGO GO:0006024; P:glycosaminoglycan biosynthetic process; TAS:Reactome.
OntologiesGO GO:0006027; P:glycosaminoglycan catabolic process; TAS:Reactome.
OntologiesGO GO:0030203; P:glycosaminoglycan metabolic process; TAS:Reactome.
OntologiesGO GO:0007603; P:phototransduction, visible light; TAS:Reactome.
OntologiesGO GO:0001523; P:retinoid metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB P78333; -.
Proteomic databasesPaxDb P78333; -.
Proteomic databasesPRIDE P78333; -.
Family and domain databasesInterPro IPR001863; Glypican.
Family and domain databasesInterPro IPR019803; Glypican_CS.
Family and domain databasesPANTHER PTHR10822; PTHR10822; 1.
Family and domain databasesPfam PF01153; Glypican; 1.
Family and domain databasesPROSITE PS01207; GLYPICAN; 1.
PTM databasesPhosphoSite P78333; -.
Protein-protein interaction databasesBioGrid 108553; 2.
Protein-protein interaction databasesIntAct P78333; 2.
Protein-protein interaction databasesSTRING 9606.ENSP00000366267; -.
Enzyme and pathway databasesReactome REACT_120752; HS-GAG degradation.
Enzyme and pathway databasesReactome REACT_121248; HS-GAG biosynthesis.
Enzyme and pathway databasesReactome REACT_121408; A tetrasaccharide linker sequence is required for GAG synthesis.
Enzyme and pathway databasesReactome REACT_228239; Release of Hh-Np from the secreting cell.
Enzyme and pathway databasesReactome REACT_24968; Retinoid metabolism and transport.
Enzyme and pathway databasesReactome REACT_267654; Defective EXT2 causes exostoses 2.
Enzyme and pathway databasesReactome REACT_267659; Defective B3GAT3 causes JDSSDHD.
Enzyme and pathway databasesReactome REACT_267674; Defective EXT1 causes exostoses 1, TRPS2 and CHDS.
Enzyme and pathway databasesReactome REACT_267711; Defective B4GALT7 causes EDS, progeroid type.
3D structure databasesProteinModelPortal P78333; -.
3D structure databasesSMR P78333; 28-470.
Protocols and materials databasesDNASU 2262; -.
Phylogenomic databaseseggNOG NOG246767; -.
Phylogenomic databasesGeneTree ENSGT00550000074430; -.
Phylogenomic databasesHOGENOM HOG000049177; -.
Phylogenomic databasesHOVERGEN HBG005896; -.
Phylogenomic databasesInParanoid P78333; -.
Phylogenomic databasesKO K08111; -.
Phylogenomic databasesOMA SPKPDKW; -.
Phylogenomic databasesOrthoDB EOG761BTG; -.
Phylogenomic databasesPhylomeDB P78333; -.
Phylogenomic databasesTreeFam TF105317; -.
Organism-specific databasesCTD 2262; -.
Organism-specific databasesGeneCards GC13P092050; -.
Organism-specific databasesHGNC HGNC:4453; GPC5.
Organism-specific databasesHPA CAB025506; -.
Organism-specific databasesHPA HPA040152; -.
Organism-specific databasesHPA HPA057418; -.
Organism-specific databasesMIM 602446; gene.
Organism-specific databasesneXtProt NX_P78333; -.
Organism-specific databasesPharmGKB PA28834; -.
OtherChiTaRS GPC5; human.
OtherGeneWiki Glypican_5; -.
OtherGenomeRNAi 2262; -.
OtherNextBio 9185; -.
OtherPRO PR:P78333; -.



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