Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 10082
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000377047; ENSP00000366246; ENSG00000183098.
Genome annotation databasesGeneID 10082; -.
Genome annotation databasesKEGG hsa:10082; -.
Genome annotation databasesUCSC uc001vlt.3; human.
Sequence databasesCCDS CCDS9469.1; -.
Sequence databasesEMBL AF111178; AAD31392.1; -; mRNA.
Sequence databasesEMBL AF105267; AAD55749.1; -; mRNA.
Sequence databasesEMBL AY358462; AAQ88827.1; -; mRNA.
Sequence databasesEMBL BC106947; AAI06948.1; -; mRNA.
Sequence databasesEMBL AK290144; BAF82833.1; -; mRNA.
Sequence databasesEMBL AL139798; CAC39445.2; -; Genomic_DNA.
Sequence databasesEMBL AL137144; CAC39445.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL160036; CAC39445.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162455; CAC39445.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL354811; CAC39445.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL161426; CAC39445.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL160036; CAI15668.1; -; Genomic_DNA.
Sequence databasesEMBL AL137144; CAI15668.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL354811; CAI15668.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162455; CAI15668.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL161426; CAI15668.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL139798; CAI15668.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL161426; CAH71606.1; -; Genomic_DNA.
Sequence databasesEMBL AL354811; CAH71606.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162455; CAH71606.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL160036; CAH71606.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL139798; CAH71606.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL137144; CAH71606.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162455; CAC40695.2; -; Genomic_DNA.
Sequence databasesEMBL AL354811; CAC40695.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL161426; CAC40695.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL160036; CAC40695.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL139798; CAC40695.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL137144; CAC40695.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL354811; CAC21820.2; -; Genomic_DNA.
Sequence databasesEMBL AL162455; CAC21820.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL161426; CAC21820.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL160036; CAC21820.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL139798; CAC21820.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL137144; CAC21820.2; JOINED; Genomic_DNA.
Sequence databasesEMBL AL137144; CAH71332.1; -; Genomic_DNA.
Sequence databasesEMBL AL354811; CAH71332.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL162455; CAH71332.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL161426; CAH71332.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL160036; CAH71332.1; JOINED; Genomic_DNA.
Sequence databasesEMBL AL139798; CAH71332.1; JOINED; Genomic_DNA.
Sequence databasesRefSeq NP_005699.1; NM_005708.3.
Sequence databasesUniGene Hs.444329; -.
Sequence databasesUniGene Hs.615434; -.
Polymorphism databasesDMDM 9973298; -.
Gene expression databasesBgee Q9Y625; -.
Gene expression databasesCleanEx HS_GPC6; -.
Gene expression databasesGenevestigator Q9Y625; -.
OntologiesGO GO:0031225; C:anchored component of membrane; IEA:UniProtKB-KW.
OntologiesGO GO:0005796; C:Golgi lumen; TAS:Reactome.
OntologiesGO GO:0005887; C:integral component of plasma membrane; TAS:ProtInc.
OntologiesGO GO:0043202; C:lysosomal lumen; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProt.
OntologiesGO GO:0005886; C:plasma membrane; TAS:Reactome.
OntologiesGO GO:0005578; C:proteinaceous extracellular matrix; IEA:InterPro.
OntologiesGO GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.
OntologiesGO GO:0016477; P:cell migration; IDA:UniProtKB.
OntologiesGO GO:0030204; P:chondroitin sulfate metabolic process; TAS:Reactome.
OntologiesGO GO:0006024; P:glycosaminoglycan biosynthetic process; TAS:Reactome.
OntologiesGO GO:0006027; P:glycosaminoglycan catabolic process; TAS:Reactome.
OntologiesGO GO:0030203; P:glycosaminoglycan metabolic process; TAS:Reactome.
OntologiesGO GO:0007603; P:phototransduction, visible light; TAS:Reactome.
OntologiesGO GO:0001523; P:retinoid metabolic process; TAS:Reactome.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB Q9Y625; -.
Proteomic databasesPaxDb Q9Y625; -.
Proteomic databasesPRIDE Q9Y625; -.
Family and domain databasesInterPro IPR001863; Glypican.
Family and domain databasesInterPro IPR019803; Glypican_CS.
Family and domain databasesPANTHER PTHR10822; PTHR10822; 1.
Family and domain databasesPfam PF01153; Glypican; 1.
Family and domain databasesPROSITE PS01207; GLYPICAN; 1.
Protein-protein interaction databasesBioGrid 115391; 8.
Protein-protein interaction databasesIntAct Q9Y625; 3.
Protein-protein interaction databasesSTRING 9606.ENSP00000366246; -.
Enzyme and pathway databasesReactome REACT_120752; HS-GAG degradation.
Enzyme and pathway databasesReactome REACT_121248; HS-GAG biosynthesis.
Enzyme and pathway databasesReactome REACT_121408; A tetrasaccharide linker sequence is required for GAG synthesis.
Enzyme and pathway databasesReactome REACT_24968; Retinoid metabolism and transport.
Enzyme and pathway databasesReactome REACT_267654; Defective EXT2 causes exostoses 2.
Enzyme and pathway databasesReactome REACT_267659; Defective B3GAT3 causes JDSSDHD.
Enzyme and pathway databasesReactome REACT_267674; Defective EXT1 causes exostoses 1, TRPS2 and CHDS.
Enzyme and pathway databasesReactome REACT_267711; Defective B4GALT7 causes EDS, progeroid type.
3D structure databasesProteinModelPortal Q9Y625; -.
3D structure databasesSMR Q9Y625; 27-482.
Phylogenomic databaseseggNOG NOG235988; -.
Phylogenomic databasesGeneTree ENSGT00550000074430; -.
Phylogenomic databasesHOGENOM HOG000253003; -.
Phylogenomic databasesHOVERGEN HBG003464; -.
Phylogenomic databasesInParanoid Q9Y625; -.
Phylogenomic databasesKO K08112; -.
Phylogenomic databasesOMA YAICKDE; -.
Phylogenomic databasesOrthoDB EOG761BTG; -.
Phylogenomic databasesPhylomeDB Q9Y625; -.
Phylogenomic databasesTreeFam TF105317; -.
Organism-specific databasesCTD 10082; -.
Organism-specific databasesGeneCards GC13P093879; -.
Organism-specific databasesHGNC HGNC:4454; GPC6.
Organism-specific databasesHPA HPA017671; -.
Organism-specific databasesMIM 258315; phenotype.
Organism-specific databasesMIM 604404; gene.
Organism-specific databasesneXtProt NX_Q9Y625; -.
Organism-specific databasesOrphanet 93329; Autosomal recessive omodysplasia.
Organism-specific databasesPharmGKB PA28835; -.
OtherChiTaRS GPC6; human.
OtherGeneWiki Glypican_6; -.
OtherGenomeRNAi 10082; -.
OtherNextBio 38115; -.
OtherPRO PR:Q9Y625; -.



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