Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 23708
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000340438; ENSP00000341247; ENSG00000189369.
Genome annotation databasesGeneID 23708; -.
Genome annotation databasesKEGG hsa:23708; -.
Genome annotation databasesUCSC uc004dpl.3; human.
Sequence databasesCCDS CCDS14336.1; -.
Sequence databasesEMBL AJ251548; CAB91089.1; -; mRNA.
Sequence databasesEMBL AK001303; BAA91612.1; -; mRNA.
Sequence databasesEMBL AL929101; CAH71524.1; -; Genomic_DNA.
Sequence databasesEMBL CH471230; EAW62898.1; -; Genomic_DNA.
Sequence databasesEMBL BC036077; AAH36077.1; -; mRNA.
Sequence databasesRefSeq NP_060564.2; NM_018094.4.
Sequence databasesUniGene Hs.59523; -.
Polymorphism databasesDMDM 182647413; -.
Gene expression databasesBgee Q8IYD1; -.
Gene expression databasesCleanEx HS_GSPT2; -.
Gene expression databasesGenevestigator Q8IYD1; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
OntologiesGO GO:0003924; F:GTPase activity; IEA:InterPro.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
Proteomic databasesMaxQB Q8IYD1; -.
Proteomic databasesPaxDb Q8IYD1; -.
Proteomic databasesPeptideAtlas Q8IYD1; -.
Proteomic databasesPRIDE Q8IYD1; -.
Family and domain databasesGene3D 3.40.50.300; -; 1.
Family and domain databasesInterPro IPR009818; Ataxin-2_C.
Family and domain databasesInterPro IPR000795; EF_GTP-bd_dom.
Family and domain databasesInterPro IPR027417; P-loop_NTPase.
Family and domain databasesInterPro IPR009000; Transl_B-barrel.
Family and domain databasesInterPro IPR009001; Transl_elong_EF1A/Init_IF2_C.
Family and domain databasesInterPro IPR004161; Transl_elong_EFTu/EF1A_2.
Family and domain databasesInterPro IPR004160; Transl_elong_EFTu/EF1A_C.
Family and domain databasesPfam PF00009; GTP_EFTU; 1.
Family and domain databasesPfam PF03144; GTP_EFTU_D2; 1.
Family and domain databasesPfam PF03143; GTP_EFTU_D3; 1.
Family and domain databasesPfam PF07145; PAM2; 1.
Family and domain databasesPRINTS PR00315; ELONGATNFCT.
Family and domain databasesPROSITE PS00301; G_TR_1; 1.
Family and domain databasesPROSITE PS51722; G_TR_2; 1.
Family and domain databasesSUPFAM SSF50447; SSF50447; 1.
Family and domain databasesSUPFAM SSF50465; SSF50465; 1.
Family and domain databasesSUPFAM SSF52540; SSF52540; 1.
PTM databasesPhosphoSite Q8IYD1; -.
Protein-protein interaction databasesBioGrid 117221; 20.
Protein-protein interaction databasesIntAct Q8IYD1; 6.
Protein-protein interaction databasesMINT MINT-4994700; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000341247; -.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
3D structure databasesPDB 3KUJ; X-ray; 1.40 A; B=59-73.
3D structure databasesPDBsum 3KUJ; -.
3D structure databasesProteinModelPortal Q8IYD1; -.
3D structure databasesSMR Q8IYD1; 198-625.
Phylogenomic databaseseggNOG COG5256; -.
Phylogenomic databasesGeneTree ENSGT00620000087924; -.
Phylogenomic databasesHOGENOM HOG000229291; -.
Phylogenomic databasesHOVERGEN HBG000179; -.
Phylogenomic databasesInParanoid Q8IYD1; -.
Phylogenomic databasesKO K03267; -.
Phylogenomic databasesOMA QVDMETP; -.
Phylogenomic databasesOrthoDB EOG76X5ZT; -.
Phylogenomic databasesPhylomeDB Q8IYD1; -.
Phylogenomic databasesTreeFam TF300566; -.
Organism-specific databasesCTD 23708; -.
Organism-specific databasesGeneCards GC0XP051503; -.
Organism-specific databasesH-InvDB HIX0023147; -.
Organism-specific databasesHGNC HGNC:4622; GSPT2.
Organism-specific databasesHPA HPA044769; -.
Organism-specific databasesMIM 300418; gene.
Organism-specific databasesneXtProt NX_Q8IYD1; -.
Organism-specific databasesPharmGKB PA29013; -.
OtherChiTaRS GSPT2; human.
OtherEvolutionaryTrace Q8IYD1; -.
OtherGeneWiki GSPT2; -.
OtherGenomeRNAi 23708; -.
OtherNextBio 46605; -.
OtherPRO PR:Q8IYD1; -.



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