Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 3417
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000345146; ENSP00000260985; ENSG00000138413.
Genome annotation databasesEnsembl ENST00000415913; ENSP00000390265; ENSG00000138413.
Genome annotation databasesEnsembl ENST00000446179; ENSP00000410513; ENSG00000138413.
Genome annotation databasesGeneID 3417; -.
Genome annotation databasesKEGG hsa:3417; -.
Genome annotation databasesUCSC uc002vcs.3; human.
Sequence databasesCCDS CCDS2381.1; -.
Sequence databasesEMBL AF020038; AAD02918.1; -; mRNA.
Sequence databasesEMBL AF113917; AAD29284.1; -; mRNA.
Sequence databasesEMBL AL136702; CAB66637.1; -; mRNA.
Sequence databasesEMBL CR541695; CAG46496.1; -; mRNA.
Sequence databasesEMBL BX537411; CAD97653.1; -; mRNA.
Sequence databasesEMBL AC016697; AAX93221.1; -; Genomic_DNA.
Sequence databasesEMBL CH471063; EAW70439.1; -; Genomic_DNA.
Sequence databasesEMBL BC012846; AAH12846.1; -; mRNA.
Sequence databasesEMBL BC093020; AAH93020.1; -; mRNA.
Sequence databasesEMBL U62389; AAB17375.1; -; mRNA.
Sequence databasesPIR T46280; T46280.
Sequence databasesRefSeq NP_001269315.1; NM_001282386.1.
Sequence databasesRefSeq NP_001269316.1; NM_001282387.1.
Sequence databasesRefSeq NP_005887.2; NM_005896.3.
Sequence databasesUniGene Hs.593422; -.
Gene expression databasesBgee O75874; -.
Gene expression databasesCleanEx HS_IDH1; -.
Gene expression databasesExpressionAtlas O75874; baseline and differential.
Gene expression databasesGenevestigator O75874; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:LIFEdb.
OntologiesGO GO:0005829; C:cytosol; IDA:UniProtKB.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProtKB.
OntologiesGO GO:0005739; C:mitochondrion; IEA:Ensembl.
OntologiesGO GO:0005782; C:peroxisomal matrix; TAS:Reactome.
OntologiesGO GO:0005777; C:peroxisome; IDA:UniProtKB.
OntologiesGO GO:0004450; F:isocitrate dehydrogenase (NADP+) activity; IDA:UniProtKB.
OntologiesGO GO:0000287; F:magnesium ion binding; IDA:UniProtKB.
OntologiesGO GO:0051287; F:NAD binding; IEA:InterPro.
OntologiesGO GO:0050661; F:NADP binding; IEA:Ensembl.
OntologiesGO GO:0042803; F:protein homodimerization activity; IPI:UniProtKB.
OntologiesGO GO:0005102; F:receptor binding; IPI:UniProtKB.
OntologiesGO GO:0006103; P:2-oxoglutarate metabolic process; IDA:UniProtKB.
OntologiesGO GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.
OntologiesGO GO:0008585; P:female gonad development; IEA:Ensembl.
OntologiesGO GO:0006749; P:glutathione metabolic process; IEA:Ensembl.
OntologiesGO GO:0006097; P:glyoxylate cycle; IEA:UniProtKB-KW.
OntologiesGO GO:0006102; P:isocitrate metabolic process; IDA:UniProtKB.
OntologiesGO GO:0006740; P:NADPH regeneration; TAS:Reactome.
OntologiesGO GO:0006979; P:response to oxidative stress; IEA:Ensembl.
OntologiesGO GO:0048545; P:response to steroid hormone; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
Proteomic databasesMaxQB O75874; -.
Proteomic databasesPaxDb O75874; -.
Proteomic databasesPeptideAtlas O75874; -.
Proteomic databasesPRIDE O75874; -.
Family and domain databasesGene3D 3.40.718.10; -; 1.
Family and domain databasesInterPro IPR019818; IsoCit/isopropylmalate_DH_CS.
Family and domain databasesInterPro IPR004790; Isocitrate_DH_NADP.
Family and domain databasesInterPro IPR024084; IsoPropMal-DH-like_dom.
Family and domain databasesPANTHER PTHR11822; PTHR11822; 1.
Family and domain databasesPfam PF00180; Iso_dh; 1.
Family and domain databasesPIRSF PIRSF000108; IDH_NADP; 1.
Family and domain databasesPROSITE PS00470; IDH_IMDH; 1.
Family and domain databasesTIGRFAMs TIGR00127; nadp_idh_euk; 1.
PTM databasesPhosphoSite O75874; -.
Protein-protein interaction databasesBioGrid 109643; 35.
Protein-protein interaction databasesDIP DIP-59311N; -.
Protein-protein interaction databasesIntAct O75874; 4.
Protein-protein interaction databasesMINT MINT-4998878; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000260985; -.
Enzyme and pathway databasesBioCyc MetaCyc:HS06502-MONOMER; -.
Enzyme and pathway databasesReactome REACT_160183; Abnormal conversion of 2-oxoglutarate to 2-hydroxyglutarate.
Enzyme and pathway databasesReactome REACT_16904; NADPH regeneration.
Enzyme and pathway databasesSABIO-RK O75874; -.
2D gel databasesOGP O75874; -.
2D gel databasesREPRODUCTION-2DPAGE IPI00027223; -.
2D gel databasesUCD-2DPAGE O75874; -.
3D structure databasesPDB 1T09; X-ray; 2.70 A; A/B=1-414.
3D structure databasesPDB 1T0L; X-ray; 2.41 A; A/B/C/D=1-414.
3D structure databasesPDB 3INM; X-ray; 2.10 A; A/B/C=1-414.
3D structure databasesPDB 3MAP; X-ray; 2.80 A; A/B=1-414.
3D structure databasesPDB 3MAR; X-ray; 3.41 A; A/B=1-414.
3D structure databasesPDB 3MAS; X-ray; 3.20 A; A/B=1-414.
3D structure databasesPDB 4I3K; X-ray; 3.31 A; A/B=1-414.
3D structure databasesPDB 4I3L; X-ray; 3.29 A; A/B=1-414.
3D structure databasesPDB 4KZO; X-ray; 2.20 A; A/B/C=1-414.
3D structure databasesPDB 4L03; X-ray; 2.10 A; A/B/C=1-414.
3D structure databasesPDB 4L04; X-ray; 2.87 A; A/B/C/D/E/F=1-414.
3D structure databasesPDB 4L06; X-ray; 2.28 A; A/B/C/D/E/F=1-414.
3D structure databasesPDBsum 1T09; -.
3D structure databasesPDBsum 1T0L; -.
3D structure databasesPDBsum 3INM; -.
3D structure databasesPDBsum 3MAP; -.
3D structure databasesPDBsum 3MAR; -.
3D structure databasesPDBsum 3MAS; -.
3D structure databasesPDBsum 4I3K; -.
3D structure databasesPDBsum 4I3L; -.
3D structure databasesPDBsum 4KZO; -.
3D structure databasesPDBsum 4L03; -.
3D structure databasesPDBsum 4L04; -.
3D structure databasesPDBsum 4L06; -.
3D structure databasesProteinModelPortal O75874; -.
3D structure databasesSMR O75874; 3-414.
Protocols and materials databasesDNASU 3417; -.
Phylogenomic databaseseggNOG COG0538; -.
Phylogenomic databasesHOGENOM HOG000019858; -.
Phylogenomic databasesHOVERGEN HBG006119; -.
Phylogenomic databasesInParanoid O75874; -.
Phylogenomic databasesKO K00031; -.
Phylogenomic databasesOMA SCGGVAM; -.
Phylogenomic databasesOrthoDB EOG7QNVKS; -.
Phylogenomic databasesPhylomeDB O75874; -.
Phylogenomic databasesTreeFam TF300428; -.
Organism-specific databasesCTD 3417; -.
Organism-specific databasesGeneCards GC02M209100; -.
Organism-specific databasesH-InvDB HIX0161877; -.
Organism-specific databasesHGNC HGNC:5382; IDH1.
Organism-specific databasesHPA CAB033218; -.
Organism-specific databasesHPA CAB062556; -.
Organism-specific databasesHPA HPA035248; -.
Organism-specific databasesHPA HPA057936; -.
Organism-specific databasesMIM 137800; phenotype.
Organism-specific databasesMIM 147700; gene.
Organism-specific databasesneXtProt NX_O75874; -.
Organism-specific databasesOrphanet 296; Enchondromatosis.
Organism-specific databasesOrphanet 251579; Giant cell glioblastoma.
Organism-specific databasesOrphanet 251576; Gliosarcoma.
Organism-specific databasesOrphanet 163634; Maffucci syndrome.
Organism-specific databasesOrphanet 99646; Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria.
Organism-specific databasesPharmGKB PA29630; -.
ChemistryBindingDB O75874; -.
ChemistryChEMBL CHEMBL2007625; -.
OtherChiTaRS IDH1; human.
OtherEvolutionaryTrace O75874; -.
OtherGeneWiki IDH1; -.
OtherGenomeRNAi 3417; -.
OtherNextBio 13470; -.
OtherPRO PR:O75874; -.



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