Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 5469
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000300651; ENSP00000300651; ENSG00000125686. [Q15648-1]
Genome annotation databasesEnsembl ENST00000394287; ENSP00000377828; ENSG00000125686. [Q15648-3]
Genome annotation databasesGeneID 5469; -.
Genome annotation databasesKEGG hsa:5469; -.
Genome annotation databasesUCSC uc002hru.2; human. [Q15648-3]
Genome annotation databasesUCSC uc002hrv.4; human. [Q15648-1]
Sequence databasesCCDS CCDS11336.1; -. [Q15648-1]
Sequence databasesEMBL Y13467; CAA73867.1; ALT_FRAME; mRNA.
Sequence databasesEMBL AF055994; AAC39854.1; ALT_FRAME; mRNA.
Sequence databasesEMBL CH471152; EAW60575.1; -; Genomic_DNA.
Sequence databasesEMBL BC006517; AAH06517.1; ALT_TERM; mRNA.
Sequence databasesEMBL BC060758; AAH60758.1; -; mRNA.
Sequence databasesEMBL BC131783; AAI31784.1; -; mRNA.
Sequence databasesEMBL AF283812; AAF98352.1; -; mRNA.
Sequence databasesEMBL L40366; AAC41736.1; -; mRNA.
Sequence databasesRefSeq NP_004765.2; NM_004774.3. [Q15648-1]
Sequence databasesUniGene Hs.643754; -.
Polymorphism databasesDMDM 158518535; -.
Gene expression databasesBgee Q15648; -.
Gene expression databasesCleanEx HS_MED1; -.
Gene expression databasesExpressionAtlas Q15648; baseline and differential.
Gene expression databasesGenevestigator Q15648; -.
OntologiesGO GO:0000785; C:chromatin; IEA:Ensembl.
OntologiesGO GO:0016592; C:mediator complex; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005730; C:nucleolus; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0032993; C:protein-DNA complex; IEA:Ensembl.
OntologiesGO GO:0003682; F:chromatin binding; IMP:UniProtKB.
OntologiesGO GO:0031490; F:chromatin DNA binding; IEA:Ensembl.
OntologiesGO GO:0001047; F:core promoter binding; IDA:UniProtKB.
OntologiesGO GO:0030331; F:estrogen receptor binding; IPI:UniProtKB.
OntologiesGO GO:0050693; F:LBD domain binding; IPI:UniProtKB.
OntologiesGO GO:0016922; F:ligand-dependent nuclear receptor binding; IDA:UniProtKB.
OntologiesGO GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IMP:UniProtKB.
OntologiesGO GO:0036033; F:mediator complex binding; IDA:UniProtKB.
OntologiesGO GO:0035257; F:nuclear hormone receptor binding; IPI:UniProtKB.
OntologiesGO GO:0042975; F:peroxisome proliferator activated receptor binding; IPI:UniProtKB.
OntologiesGO GO:0004872; F:receptor activity; IDA:UniProtKB.
OntologiesGO GO:0042974; F:retinoic acid receptor binding; IPI:UniProtKB.
OntologiesGO GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IEA:Ensembl.
OntologiesGO GO:0001104; F:RNA polymerase II transcription cofactor activity; IDA:UniProtKB.
OntologiesGO GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; ISS:UniProtKB.
OntologiesGO GO:0046966; F:thyroid hormone receptor binding; IDA:UniProtKB.
OntologiesGO GO:0030375; F:thyroid hormone receptor coactivator activity; IMP:UniProtKB.
OntologiesGO GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
OntologiesGO GO:0003712; F:transcription cofactor activity; IDA:UniProtKB.
OntologiesGO GO:0008134; F:transcription factor binding; IPI:UniProtKB.
OntologiesGO GO:0042809; F:vitamin D receptor binding; IPI:UniProtKB.
OntologiesGO GO:0006702; P:androgen biosynthetic process; IMP:UniProtKB.
OntologiesGO GO:0030521; P:androgen receptor signaling pathway; IDA:UniProtKB.
OntologiesGO GO:0001525; P:angiogenesis; ISS:UniProtKB.
OntologiesGO GO:0007420; P:brain development; IEA:Ensembl.
OntologiesGO GO:0000902; P:cell morphogenesis; IMP:UniProtKB.
OntologiesGO GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.
OntologiesGO GO:0071364; P:cellular response to epidermal growth factor stimulus; IDA:UniProtKB.
OntologiesGO GO:0035729; P:cellular response to hepatocyte growth factor stimulus; IEA:Ensembl.
OntologiesGO GO:0071383; P:cellular response to steroid hormone stimulus; IDA:UniProtKB.
OntologiesGO GO:0097067; P:cellular response to thyroid hormone stimulus; IDA:UniProtKB.
OntologiesGO GO:0035050; P:embryonic heart tube development; IEA:Ensembl.
OntologiesGO GO:0035162; P:embryonic hemopoiesis; IEA:Ensembl.
OntologiesGO GO:0035116; P:embryonic hindlimb morphogenesis; IEA:Ensembl.
OntologiesGO GO:0001892; P:embryonic placenta development; IEA:Ensembl.
OntologiesGO GO:0048822; P:enucleate erythrocyte development; IEA:Ensembl.
OntologiesGO GO:0060750; P:epithelial cell proliferation involved in mammary gland duct elongation; IEA:Ensembl.
OntologiesGO GO:0070371; P:ERK1 and ERK2 cascade; IDA:UniProtKB.
OntologiesGO GO:0048821; P:erythrocyte development; ISS:UniProtKB.
OntologiesGO GO:0045444; P:fat cell differentiation; IDA:MGI.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0030518; P:intracellular steroid hormone receptor signaling pathway; IDA:UniProtKB.
OntologiesGO GO:0030216; P:keratinocyte differentiation; IMP:UniProtKB.
OntologiesGO GO:0007595; P:lactation; IEA:Ensembl.
OntologiesGO GO:0002088; P:lens development in camera-type eye; ISS:UniProtKB.
OntologiesGO GO:0001889; P:liver development; IEA:Ensembl.
OntologiesGO GO:0060745; P:mammary gland branching involved in pregnancy; IEA:Ensembl.
OntologiesGO GO:0060744; P:mammary gland branching involved in thelarche; IEA:Ensembl.
OntologiesGO GO:0035855; P:megakaryocyte development; ISS:UniProtKB.
OntologiesGO GO:0030224; P:monocyte differentiation; IEA:Ensembl.
OntologiesGO GO:0042789; P:mRNA transcription from RNA polymerase II promoter; ISS:UniProtKB.
OntologiesGO GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.
OntologiesGO GO:0010839; P:negative regulation of keratinocyte proliferation; IMP:UniProtKB.
OntologiesGO GO:0045665; P:negative regulation of neuron differentiation; ISS:UniProtKB.
OntologiesGO GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
OntologiesGO GO:0031100; P:organ regeneration; IEA:Ensembl.
OntologiesGO GO:0035357; P:peroxisome proliferator activated receptor signaling pathway; IEA:Ensembl.
OntologiesGO GO:0070318; P:positive regulation of G0 to G1 transition; IEA:Ensembl.
OntologiesGO GO:0010628; P:positive regulation of gene expression; IDA:UniProtKB.
OntologiesGO GO:2000347; P:positive regulation of hepatocyte proliferation; IEA:Ensembl.
OntologiesGO GO:0060335; P:positive regulation of interferon-gamma-mediated signaling pathway; IEA:Ensembl.
OntologiesGO GO:0033148; P:positive regulation of intracellular estrogen receptor signaling pathway; IEA:Ensembl.
OntologiesGO GO:0045618; P:positive regulation of keratinocyte differentiation; IMP:UniProtKB.
OntologiesGO GO:0033601; P:positive regulation of mammary gland epithelial cell proliferation; IEA:Ensembl.
OntologiesGO GO:0033160; P:positive regulation of protein import into nucleus, translocation; IEA:Ensembl.
OntologiesGO GO:2000273; P:positive regulation of receptor activity; IMP:UniProtKB.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:UniProtKB.
OntologiesGO GO:0051726; P:regulation of cell cycle; NAS:UniProtKB.
OntologiesGO GO:2001141; P:regulation of RNA biosynthetic process; IMP:UniProtKB.
OntologiesGO GO:0006356; P:regulation of transcription from RNA polymerase I promoter; IDA:UniProtKB.
OntologiesGO GO:0070562; P:regulation of vitamin D receptor signaling pathway; IEA:Ensembl.
OntologiesGO GO:0003406; P:retinal pigment epithelium development; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0006590; P:thyroid hormone generation; IEA:Ensembl.
OntologiesGO GO:0002154; P:thyroid hormone mediated signaling pathway; IMP:UniProtKB.
OntologiesGO GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0003222; P:ventricular trabecula myocardium morphogenesis; IEA:Ensembl.
Proteomic databasesMaxQB Q15648; -.
Proteomic databasesPaxDb Q15648; -.
Proteomic databasesPRIDE Q15648; -.
Family and domain databasesInterPro IPR019680; Mediator_Med1_met/fun.
Family and domain databasesPfam PF10744; Med1; 1.
PTM databasesPhosphoSite Q15648; -.
Protein-protein interaction databasesBioGrid 111465; 94.
Protein-protein interaction databasesDIP DIP-24212N; -.
Protein-protein interaction databasesIntAct Q15648; 25.
Protein-protein interaction databasesMINT MINT-1345780; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000300651; -.
Enzyme and pathway databasesReactome REACT_111118; BMAL1:CLOCK,NPAS2 activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_116145; PPARA activates gene expression.
Enzyme and pathway databasesReactome REACT_118659; RORA activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_118713; YAP1- and WWTR1 (TAZ)-stimulated gene expression.
Enzyme and pathway databasesReactome REACT_118789; REV-ERBA represses gene expression.
Enzyme and pathway databasesReactome REACT_12627; Generic Transcription Pathway.
Enzyme and pathway databasesReactome REACT_147904; Activation of gene expression by SREBF (SREBP).
Enzyme and pathway databasesReactome REACT_15525; Nuclear Receptor transcription pathway.
Enzyme and pathway databasesReactome REACT_19241; Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha).
Enzyme and pathway databasesReactome REACT_200608; Transcriptional activation of mitochondrial biogenesis.
Enzyme and pathway databasesReactome REACT_24941; Circadian Clock.
Enzyme and pathway databasesReactome REACT_267716; Orphan transporters.
Enzyme and pathway databasesReactome REACT_27161; Transcriptional regulation of white adipocyte differentiation.
Enzyme and pathway databasesSignaLink Q15648; -.
3D structure databasesPDB 1RJK; X-ray; 1.99 A; C=640-652.
3D structure databasesPDB 1RK3; X-ray; 2.20 A; C=640-652.
3D structure databasesPDB 1RKG; X-ray; 1.90 A; C=640-652.
3D structure databasesPDB 1RKH; X-ray; 2.28 A; C=640-652.
3D structure databasesPDB 2O4J; X-ray; 1.74 A; C=640-652.
3D structure databasesPDB 2O4R; X-ray; 1.98 A; C=640-652.
3D structure databasesPDB 2ZFX; X-ray; 1.99 A; C=640-652.
3D structure databasesPDB 3A2H; X-ray; 2.50 A; B=640-652.
3D structure databasesPDB 3AUN; X-ray; 1.81 A; B=640-652.
3D structure databasesPDB 3VJS; X-ray; 1.93 A; C=640-652.
3D structure databasesPDB 3VJT; X-ray; 2.00 A; C=640-652.
3D structure databasesPDB 3VRT; X-ray; 2.40 A; C=640-652.
3D structure databasesPDB 3VRU; X-ray; 2.00 A; C=640-652.
3D structure databasesPDB 3VRV; X-ray; 1.90 A; C=640-652.
3D structure databasesPDB 3VRW; X-ray; 2.40 A; C=640-652.
3D structure databasesPDB 3W0G; X-ray; 1.94 A; C=640-652.
3D structure databasesPDB 3W0H; X-ray; 1.80 A; C=640-652.
3D structure databasesPDB 3W0I; X-ray; 1.90 A; C=640-652.
3D structure databasesPDB 3W0J; X-ray; 1.84 A; C=640-652.
3D structure databasesPDB 3W5P; X-ray; 1.90 A; C=640-652.
3D structure databasesPDB 3W5Q; X-ray; 1.90 A; C=640-652.
3D structure databasesPDB 3W5R; X-ray; 2.20 A; C=640-652.
3D structure databasesPDB 3W5T; X-ray; 2.29 A; C=640-652.
3D structure databasesPDB 3WT5; X-ray; 1.90 A; C=640-652.
3D structure databasesPDB 3WT6; X-ray; 2.00 A; C=640-652.
3D structure databasesPDB 3WT7; X-ray; 2.40 A; C=640-652.
3D structure databasesPDBsum 1RJK; -.
3D structure databasesPDBsum 1RK3; -.
3D structure databasesPDBsum 1RKG; -.
3D structure databasesPDBsum 1RKH; -.
3D structure databasesPDBsum 2O4J; -.
3D structure databasesPDBsum 2O4R; -.
3D structure databasesPDBsum 2ZFX; -.
3D structure databasesPDBsum 3A2H; -.
3D structure databasesPDBsum 3AUN; -.
3D structure databasesPDBsum 3VJS; -.
3D structure databasesPDBsum 3VJT; -.
3D structure databasesPDBsum 3VRT; -.
3D structure databasesPDBsum 3VRU; -.
3D structure databasesPDBsum 3VRV; -.
3D structure databasesPDBsum 3VRW; -.
3D structure databasesPDBsum 3W0G; -.
3D structure databasesPDBsum 3W0H; -.
3D structure databasesPDBsum 3W0I; -.
3D structure databasesPDBsum 3W0J; -.
3D structure databasesPDBsum 3W5P; -.
3D structure databasesPDBsum 3W5Q; -.
3D structure databasesPDBsum 3W5R; -.
3D structure databasesPDBsum 3W5T; -.
3D structure databasesPDBsum 3WT5; -.
3D structure databasesPDBsum 3WT6; -.
3D structure databasesPDBsum 3WT7; -.
3D structure databasesProteinModelPortal Q15648; -.
Protocols and materials databasesDNASU 5469; -.
Phylogenomic databaseseggNOG NOG12793; -.
Phylogenomic databasesGeneTree ENSGT00660000095569; -.
Phylogenomic databasesHOVERGEN HBG101127; -.
Phylogenomic databasesInParanoid Q15648; -.
Phylogenomic databasesKO K15144; -.
Phylogenomic databasesOMA PKHQTED; -.
Phylogenomic databasesOrthoDB EOG7R830S; -.
Phylogenomic databasesPhylomeDB Q15648; -.
Phylogenomic databasesTreeFam TF324954; -.
Organism-specific databasesCTD 5469; -.
Organism-specific databasesGeneCards GC17M037560; -.
Organism-specific databasesHGNC HGNC:9234; MED1.
Organism-specific databasesHPA CAB017696; -.
Organism-specific databasesHPA HPA052818; -.
Organism-specific databasesMIM 604311; gene.
Organism-specific databasesneXtProt NX_Q15648; -.
Organism-specific databasesPharmGKB PA33556; -.
OtherChiTaRS MED1; human.
OtherEvolutionaryTrace Q15648; -.
OtherGeneWiki MED1; -.
OtherGenomeRNAi 5469; -.
OtherNextBio 21174; -.
OtherPRO PR:Q15648; -.



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