Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 5424
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000440232; ENSP00000406046; ENSG00000062822.
Genome annotation databasesEnsembl ENST00000599857; ENSP00000473052; ENSG00000062822.
Genome annotation databasesGeneID 5424; -.
Genome annotation databasesKEGG hsa:5424; -.
Genome annotation databasesUCSC uc002psb.5; human.
Sequence databasesCCDS CCDS12795.1; -.
Sequence databasesEMBL M80397; AAA58439.1; -; mRNA.
Sequence databasesEMBL M81735; AAA35768.1; -; mRNA.
Sequence databasesEMBL AY129569; AAM76971.1; -; Genomic_DNA.
Sequence databasesEMBL BC008800; AAH08800.1; -; mRNA.
Sequence databasesPIR A41618; A41618.
Sequence databasesRefSeq NP_001243778.1; NM_001256849.1.
Sequence databasesRefSeq NP_002682.2; NM_002691.3.
Sequence databasesUniGene Hs.279413; -.
Polymorphism databasesDMDM 50403732; -.
Gene expression databasesBgee P28340; -.
Gene expression databasesCleanEx HS_POLD1; -.
Gene expression databasesExpressionAtlas P28340; baseline and differential.
Gene expression databasesGenevestigator P28340; -.
OntologiesGO GO:0016235; C:aggresome; IDA:HPA.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0043625; C:delta DNA polymerase complex; IBA:RefGenome.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0000109; C:nucleotide-excision repair complex; IDA:UniProtKB.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0008408; F:3'-5' exonuclease activity; IBA:RefGenome.
OntologiesGO GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
OntologiesGO GO:0003682; F:chromatin binding; IDA:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; IDA:UniProtKB.
OntologiesGO GO:0003887; F:DNA-directed DNA polymerase activity; IMP:UniProtKB.
OntologiesGO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
OntologiesGO GO:0000166; F:nucleotide binding; IEA:InterPro.
OntologiesGO GO:0006284; P:base-excision repair; TAS:Reactome.
OntologiesGO GO:0006287; P:base-excision repair, gap-filling; IDA:UniProtKB.
OntologiesGO GO:0006281; P:DNA repair; TAS:Reactome.
OntologiesGO GO:0006260; P:DNA replication; IMP:UniProtKB.
OntologiesGO GO:0045004; P:DNA replication proofreading; IBA:RefGenome.
OntologiesGO GO:0043137; P:DNA replication, removal of RNA primer; IBA:RefGenome.
OntologiesGO GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.
OntologiesGO GO:0000731; P:DNA synthesis involved in DNA repair; IDA:UniProtKB.
OntologiesGO GO:0055089; P:fatty acid homeostasis; IMP:UniProtKB.
OntologiesGO GO:0000278; P:mitotic cell cycle; TAS:Reactome.
OntologiesGO GO:0006289; P:nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0006297; P:nucleotide-excision repair, DNA gap filling; IMP:UniProtKB.
OntologiesGO GO:0007346; P:regulation of mitotic cell cycle; IBA:RefGenome.
OntologiesGO GO:0009411; P:response to UV; TAS:ProtInc.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0000723; P:telomere maintenance; TAS:Reactome.
OntologiesGO GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.
OntologiesGO GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.
OntologiesGO GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
Proteomic databasesMaxQB P28340; -.
Proteomic databasesPaxDb P28340; -.
Proteomic databasesPRIDE P28340; -.
Family and domain databasesGene3D 3.30.420.10; -; 1.
Family and domain databasesGene3D 3.90.1600.10; -; 2.
Family and domain databasesInterPro IPR006172; DNA-dir_DNA_pol_B.
Family and domain databasesInterPro IPR017964; DNA-dir_DNA_pol_B_CS.
Family and domain databasesInterPro IPR006133; DNA-dir_DNA_pol_B_exonuc.
Family and domain databasesInterPro IPR006134; DNA-dir_DNA_pol_B_multi_dom.
Family and domain databasesInterPro IPR023211; DNA_pol_palm_dom.
Family and domain databasesInterPro IPR012337; RNaseH-like_dom.
Family and domain databasesInterPro IPR025687; Znf-C4pol.
Family and domain databasesPfam PF00136; DNA_pol_B; 1.
Family and domain databasesPfam PF03104; DNA_pol_B_exo1; 1.
Family and domain databasesPfam PF14260; zf-C4pol; 1.
Family and domain databasesPRINTS PR00106; DNAPOLB.
Family and domain databasesPROSITE PS00116; DNA_POLYMERASE_B; 1.
Family and domain databasesSMART SM00486; POLBc; 1.
Family and domain databasesSUPFAM SSF53098; SSF53098; 1.
PTM databasesPhosphoSite P28340; -.
Protein-protein interaction databasesBioGrid 111420; 53.
Protein-protein interaction databasesIntAct P28340; 18.
Protein-protein interaction databasesMINT MINT-1414678; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000262266; -.
Enzyme and pathway databasesReactome REACT_1128; Resolution of AP sites via the multiple-nucleotide patch replacement pathway.
Enzyme and pathway databasesReactome REACT_1385; Processive synthesis on the lagging strand.
Enzyme and pathway databasesReactome REACT_160176; Cytosolic iron-sulfur cluster assembly.
Enzyme and pathway databasesReactome REACT_1792; Polymerase switching.
Enzyme and pathway databasesReactome REACT_1838; Leading Strand Synthesis.
Enzyme and pathway databasesReactome REACT_1993; Repair synthesis for gap-filling by DNA polymerase in TC-NER.
Enzyme and pathway databasesReactome REACT_2192; Removal of DNA patch containing abasic residue.
Enzyme and pathway databasesReactome REACT_228019; Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta).
Enzyme and pathway databasesReactome REACT_228145; Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha).
Enzyme and pathway databasesReactome REACT_378; Repair synthesis of patch ~27-30 bases long by DNA polymerase.
Enzyme and pathway databasesReactome REACT_70; Removal of the Flap Intermediate.
Enzyme and pathway databasesReactome REACT_7961; Telomere C-strand (Lagging Strand) Synthesis.
Enzyme and pathway databasesReactome REACT_7987; Polymerase switching on the C-strand of the telomere.
Enzyme and pathway databasesReactome REACT_7999; Removal of the Flap Intermediate from the C-strand.
Enzyme and pathway databasesReactome REACT_8027; Processive synthesis on the C-strand of the telomere.
3D structure databasesProteinModelPortal P28340; -.
3D structure databasesSMR P28340; 124-1000.
Protocols and materials databasesDNASU 5424; -.
Phylogenomic databaseseggNOG COG0417; -.
Phylogenomic databasesGeneTree ENSGT00560000077365; -.
Phylogenomic databasesHOGENOM HOG000036616; -.
Phylogenomic databasesHOVERGEN HBG051395; -.
Phylogenomic databasesInParanoid P28340; -.
Phylogenomic databasesKO K02327; -.
Phylogenomic databasesPhylomeDB P28340; -.
Phylogenomic databasesTreeFam TF352785; -.
Organism-specific databasesCTD 5424; -.
Organism-specific databasesGeneCards GC19P050889; -.
Organism-specific databasesH-InvDB HIX0202825; -.
Organism-specific databasesHGNC HGNC:9175; POLD1.
Organism-specific databasesHPA CAB004375; -.
Organism-specific databasesHPA HPA046524; -.
Organism-specific databasesMIM 174761; gene.
Organism-specific databasesMIM 612591; phenotype.
Organism-specific databasesMIM 615381; phenotype.
Organism-specific databasesneXtProt NX_P28340; -.
Organism-specific databasesOrphanet 363649; Mandibular hypoplasia-deafness-progeroid syndrome.
Organism-specific databasesPharmGKB PA33496; -.
ChemistryBindingDB P28340; -.
ChemistryChEMBL CHEMBL2735; -.
OtherGeneWiki POLD1; -.
OtherGenomeRNAi 5424; -.
OtherNextBio 20985; -.
OtherPMAP-CutDB P28340; -.
OtherPRO PR:P28340; -.



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