Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 84172
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000263331; ENSP00000263331; ENSG00000125630. [Q9H9Y6-1]
Genome annotation databasesEnsembl ENST00000409894; ENSP00000387143; ENSG00000125630. [Q9H9Y6-5]
Genome annotation databasesEnsembl ENST00000417433; ENSP00000405358; ENSG00000125630. [Q9H9Y6-2]
Genome annotation databasesEnsembl ENST00000537335; ENSP00000437914; ENSG00000125630. [Q9H9Y6-4]
Genome annotation databasesEnsembl ENST00000541869; ENSP00000444136; ENSG00000125630. [Q9H9Y6-3]
Genome annotation databasesGeneID 84172; -.
Genome annotation databasesKEGG hsa:84172; -.
Genome annotation databasesUCSC uc002thw.2; human. [Q9H9Y6-1]
Genome annotation databasesUCSC uc010fkn.2; human. [Q9H9Y6-2]
Sequence databasesCCDS CCDS2097.1; -. [Q9H9Y6-1]
Sequence databasesCCDS CCDS46395.1; -. [Q9H9Y6-2]
Sequence databasesEMBL AK022533; BAB14082.1; -; mRNA.
Sequence databasesEMBL AK022890; BAB14296.1; -; mRNA.
Sequence databasesEMBL AK128044; BAC87247.1; -; mRNA.
Sequence databasesEMBL AK301178; BAH13423.1; -; mRNA.
Sequence databasesEMBL AK302814; BAH13809.1; -; mRNA.
Sequence databasesEMBL AC012442; AAX81999.1; -; Genomic_DNA.
Sequence databasesEMBL BC110833; AAI10834.1; -; mRNA.
Sequence databasesRefSeq NP_001131076.1; NM_001137604.2. [Q9H9Y6-2]
Sequence databasesRefSeq NP_001269701.1; NM_001282772.1. [Q9H9Y6-3]
Sequence databasesRefSeq NP_001269703.1; NM_001282774.1. [Q9H9Y6-5]
Sequence databasesRefSeq NP_001269705.1; NM_001282776.1. [Q9H9Y6-4]
Sequence databasesRefSeq NP_001269706.1; NM_001282777.1.
Sequence databasesRefSeq NP_001269708.1; NM_001282779.1.
Sequence databasesRefSeq NP_061887.2; NM_019014.5. [Q9H9Y6-1]
Sequence databasesUniGene Hs.745127; -.
Polymorphism databasesDMDM 92090637; -.
Gene expression databasesBgee Q9H9Y6; -.
Gene expression databasesCleanEx HS_POLR1B; -.
Gene expression databasesExpressionAtlas Q9H9Y6; baseline and differential.
Gene expression databasesGenevestigator Q9H9Y6; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0003677; F:DNA binding; IEA:InterPro.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
OntologiesGO GO:0032549; F:ribonucleoside binding; IEA:InterPro.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.
OntologiesGO GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006360; P:transcription from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
Proteomic databasesMaxQB Q9H9Y6; -.
Proteomic databasesPaxDb Q9H9Y6; -.
Proteomic databasesPRIDE Q9H9Y6; -.
Family and domain databasesGene3D 2.40.270.10; -; 2.
Family and domain databasesGene3D 2.40.50.150; -; 1.
Family and domain databasesGene3D 3.90.1110.10; -; 1.
Family and domain databasesInterPro IPR015712; DNA-dir_RNA_pol_su2.
Family and domain databasesInterPro IPR007120; DNA-dir_RNA_pol_su2_6.
Family and domain databasesInterPro IPR007121; RNA_pol_bsu_CS.
Family and domain databasesInterPro IPR007644; RNA_pol_bsu_protrusion.
Family and domain databasesInterPro IPR009674; RNA_pol_Rpa2-specific.
Family and domain databasesInterPro IPR007642; RNA_pol_Rpb2_2.
Family and domain databasesInterPro IPR007645; RNA_pol_Rpb2_3.
Family and domain databasesInterPro IPR007647; RNA_pol_Rpb2_5.
Family and domain databasesInterPro IPR007641; RNA_pol_Rpb2_7.
Family and domain databasesInterPro IPR014724; RNA_pol_RPB2_OB-fold.
Family and domain databasesPANTHER PTHR20856; PTHR20856; 1.
Family and domain databasesPfam PF06883; RNA_pol_Rpa2_4; 1.
Family and domain databasesPfam PF04563; RNA_pol_Rpb2_1; 1.
Family and domain databasesPfam PF04561; RNA_pol_Rpb2_2; 1.
Family and domain databasesPfam PF04565; RNA_pol_Rpb2_3; 1.
Family and domain databasesPfam PF04567; RNA_pol_Rpb2_5; 1.
Family and domain databasesPfam PF00562; RNA_pol_Rpb2_6; 1.
Family and domain databasesPfam PF04560; RNA_pol_Rpb2_7; 1.
Family and domain databasesPROSITE PS01166; RNA_POL_BETA; 1.
PTM databasesPhosphoSite Q9H9Y6; -.
Protein-protein interaction databasesBioGrid 123926; 34.
Protein-protein interaction databasesDIP DIP-27538N; -.
Protein-protein interaction databasesIntAct Q9H9Y6; 19.
Protein-protein interaction databasesMINT MINT-4727878; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000263331; -.
Enzyme and pathway databasesReactome REACT_1074; RNA Polymerase I Transcription Termination.
Enzyme and pathway databasesReactome REACT_1913; RNA Polymerase I Promoter Escape.
Enzyme and pathway databasesReactome REACT_200856; NoRC negatively regulates rRNA expression.
Enzyme and pathway databasesReactome REACT_2204; RNA Polymerase I Chain Elongation.
Enzyme and pathway databasesReactome REACT_953; RNA Polymerase I Transcription Initiation.
2D gel databasesSWISS-2DPAGE Q9H9Y6; -.
3D structure databasesProteinModelPortal Q9H9Y6; -.
3D structure databasesSMR Q9H9Y6; 857-1063.
Phylogenomic databaseseggNOG COG0085; -.
Phylogenomic databasesGeneTree ENSGT00760000119399; -.
Phylogenomic databasesHOGENOM HOG000222963; -.
Phylogenomic databasesHOVERGEN HBG017742; -.
Phylogenomic databasesInParanoid Q9H9Y6; -.
Phylogenomic databasesKO K03002; -.
Phylogenomic databasesOMA EVFAGVT; -.
Phylogenomic databasesOrthoDB EOG77M8MW; -.
Phylogenomic databasesPhylomeDB Q9H9Y6; -.
Phylogenomic databasesTreeFam TF103055; -.
Organism-specific databasesCTD 84172; -.
Organism-specific databasesGeneCards GC02P113299; -.
Organism-specific databasesH-InvDB HIX0002380; -.
Organism-specific databasesHGNC HGNC:20454; POLR1B.
Organism-specific databasesHPA HPA037528; -.
Organism-specific databasesMIM 602000; gene.
Organism-specific databasesneXtProt NX_Q9H9Y6; -.
Organism-specific databasesPharmGKB PA130601182; -.
OtherGeneWiki POLR1B; -.
OtherGenomeRNAi 84172; -.
OtherNextBio 35480101; -.
OtherPRO PR:Q9H9Y6; -.
Genome annotation databasesEnsembl ENST00000263331; ENSP00000263331; ENSG00000125630. [Q9H9Y6-1]
Genome annotation databasesEnsembl ENST00000409894; ENSP00000387143; ENSG00000125630. [Q9H9Y6-5]
Genome annotation databasesEnsembl ENST00000417433; ENSP00000405358; ENSG00000125630. [Q9H9Y6-2]
Genome annotation databasesEnsembl ENST00000537335; ENSP00000437914; ENSG00000125630. [Q9H9Y6-4]
Genome annotation databasesEnsembl ENST00000541869; ENSP00000444136; ENSG00000125630. [Q9H9Y6-3]
Genome annotation databasesGeneID 84172; -.
Genome annotation databasesKEGG hsa:84172; -.
Genome annotation databasesUCSC uc002thw.2; human. [Q9H9Y6-1]
Genome annotation databasesUCSC uc010fkn.2; human. [Q9H9Y6-2]
Sequence databasesCCDS CCDS2097.1; -. [Q9H9Y6-1]
Sequence databasesCCDS CCDS46395.1; -. [Q9H9Y6-2]
Sequence databasesEMBL AK022533; BAB14082.1; -; mRNA.
Sequence databasesEMBL AK022890; BAB14296.1; -; mRNA.
Sequence databasesEMBL AK128044; BAC87247.1; -; mRNA.
Sequence databasesEMBL AK301178; BAH13423.1; -; mRNA.
Sequence databasesEMBL AK302814; BAH13809.1; -; mRNA.
Sequence databasesEMBL AC012442; AAX81999.1; -; Genomic_DNA.
Sequence databasesEMBL BC110833; AAI10834.1; -; mRNA.
Sequence databasesRefSeq NP_001131076.1; NM_001137604.2. [Q9H9Y6-2]
Sequence databasesRefSeq NP_001269701.1; NM_001282772.1. [Q9H9Y6-3]
Sequence databasesRefSeq NP_001269703.1; NM_001282774.1. [Q9H9Y6-5]
Sequence databasesRefSeq NP_001269705.1; NM_001282776.1. [Q9H9Y6-4]
Sequence databasesRefSeq NP_001269706.1; NM_001282777.1.
Sequence databasesRefSeq NP_001269708.1; NM_001282779.1.
Sequence databasesRefSeq NP_061887.2; NM_019014.5. [Q9H9Y6-1]
Sequence databasesUniGene Hs.745127; -.
Polymorphism databasesDMDM 92090637; -.
Gene expression databasesBgee Q9H9Y6; -.
Gene expression databasesCleanEx HS_POLR1B; -.
Gene expression databasesExpressionAtlas Q9H9Y6; baseline and differential.
Gene expression databasesGenevestigator Q9H9Y6; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0003677; F:DNA binding; IEA:InterPro.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
OntologiesGO GO:0032549; F:ribonucleoside binding; IEA:InterPro.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.
OntologiesGO GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006360; P:transcription from RNA polymerase I promoter; TAS:Reactome.
OntologiesGO GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
Proteomic databasesMaxQB Q9H9Y6; -.
Proteomic databasesPaxDb Q9H9Y6; -.
Proteomic databasesPRIDE Q9H9Y6; -.
Family and domain databasesGene3D 2.40.270.10; -; 2.
Family and domain databasesGene3D 2.40.50.150; -; 1.
Family and domain databasesGene3D 3.90.1110.10; -; 1.
Family and domain databasesInterPro IPR015712; DNA-dir_RNA_pol_su2.
Family and domain databasesInterPro IPR007120; DNA-dir_RNA_pol_su2_6.
Family and domain databasesInterPro IPR007121; RNA_pol_bsu_CS.
Family and domain databasesInterPro IPR007644; RNA_pol_bsu_protrusion.
Family and domain databasesInterPro IPR009674; RNA_pol_Rpa2-specific.
Family and domain databasesInterPro IPR007642; RNA_pol_Rpb2_2.
Family and domain databasesInterPro IPR007645; RNA_pol_Rpb2_3.
Family and domain databasesInterPro IPR007647; RNA_pol_Rpb2_5.
Family and domain databasesInterPro IPR007641; RNA_pol_Rpb2_7.
Family and domain databasesInterPro IPR014724; RNA_pol_RPB2_OB-fold.
Family and domain databasesPANTHER PTHR20856; PTHR20856; 1.
Family and domain databasesPfam PF06883; RNA_pol_Rpa2_4; 1.
Family and domain databasesPfam PF04563; RNA_pol_Rpb2_1; 1.
Family and domain databasesPfam PF04561; RNA_pol_Rpb2_2; 1.
Family and domain databasesPfam PF04565; RNA_pol_Rpb2_3; 1.
Family and domain databasesPfam PF04567; RNA_pol_Rpb2_5; 1.
Family and domain databasesPfam PF00562; RNA_pol_Rpb2_6; 1.
Family and domain databasesPfam PF04560; RNA_pol_Rpb2_7; 1.
Family and domain databasesPROSITE PS01166; RNA_POL_BETA; 1.
PTM databasesPhosphoSite Q9H9Y6; -.
Protein-protein interaction databasesBioGrid 123926; 34.
Protein-protein interaction databasesDIP DIP-27538N; -.
Protein-protein interaction databasesIntAct Q9H9Y6; 19.
Protein-protein interaction databasesMINT MINT-4727878; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000263331; -.
Enzyme and pathway databasesReactome REACT_1074; RNA Polymerase I Transcription Termination.
Enzyme and pathway databasesReactome REACT_1913; RNA Polymerase I Promoter Escape.
Enzyme and pathway databasesReactome REACT_200856; NoRC negatively regulates rRNA expression.
Enzyme and pathway databasesReactome REACT_2204; RNA Polymerase I Chain Elongation.
Enzyme and pathway databasesReactome REACT_953; RNA Polymerase I Transcription Initiation.
2D gel databasesSWISS-2DPAGE Q9H9Y6; -.
3D structure databasesProteinModelPortal Q9H9Y6; -.
3D structure databasesSMR Q9H9Y6; 857-1063.
Phylogenomic databaseseggNOG COG0085; -.
Phylogenomic databasesGeneTree ENSGT00760000119399; -.
Phylogenomic databasesHOGENOM HOG000222963; -.
Phylogenomic databasesHOVERGEN HBG017742; -.
Phylogenomic databasesInParanoid Q9H9Y6; -.
Phylogenomic databasesKO K03002; -.
Phylogenomic databasesOMA EVFAGVT; -.
Phylogenomic databasesOrthoDB EOG77M8MW; -.
Phylogenomic databasesPhylomeDB Q9H9Y6; -.
Phylogenomic databasesTreeFam TF103055; -.
Organism-specific databasesCTD 84172; -.
Organism-specific databasesGeneCards GC02P113299; -.
Organism-specific databasesH-InvDB HIX0002380; -.
Organism-specific databasesHGNC HGNC:20454; POLR1B.
Organism-specific databasesHPA HPA037528; -.
Organism-specific databasesMIM 602000; gene.
Organism-specific databasesneXtProt NX_Q9H9Y6; -.
Organism-specific databasesPharmGKB PA130601182; -.
OtherGeneWiki POLR1B; -.
OtherGenomeRNAi 84172; -.
OtherNextBio 35480101; -.
OtherPRO PR:Q9H9Y6; -.



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