Cancer Cell Metabolism Gene Database

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Cross referenced IDs for 5435
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000442738; ENSP00000403852; ENSG00000100142.
Genome annotation databasesGeneID 5435; -.
Genome annotation databasesKEGG hsa:5435; -.
Genome annotation databasesUCSC uc003aul.3; human.
Sequence databasesCCDS CCDS13963.1; -.
Sequence databasesEMBL Z27113; CAA81629.1; -; Genomic_DNA.
Sequence databasesEMBL AF006501; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CR456546; CAG30432.1; -; mRNA.
Sequence databasesEMBL CR457021; CAG33302.1; -; mRNA.
Sequence databasesEMBL AL031587; CAB62981.1; -; Genomic_DNA.
Sequence databasesEMBL CH471095; EAW60203.1; -; Genomic_DNA.
Sequence databasesEMBL BC003582; AAH03582.1; -; mRNA.
Sequence databasesPIR I38175; S38627.
Sequence databasesRefSeq NP_068809.1; NM_021974.4.
Sequence databasesUniGene Hs.436578; -.
Sequence databasesUniGene Hs.735742; -.
Polymorphism databasesDMDM 47117761; -.
Gene expression databasesBgee P61218; -.
Gene expression databasesCleanEx HS_POLR2F; -.
Gene expression databasesExpressionAtlas P61218; baseline and differential.
Gene expression databasesGenevestigator P61218; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005736; C:DNA-directed RNA polymerase I complex; IBA:RefGenome.
OntologiesGO GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
OntologiesGO GO:0005666; C:DNA-directed RNA polymerase III complex; IBA:RefGenome.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; IEA:InterPro.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0006370; P:7-methylguanosine mRNA capping; TAS:Reactome.
OntologiesGO GO:0006281; P:DNA repair; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0045087; P:innate immune response; TAS:Reactome.
OntologiesGO GO:0000398; P:mRNA splicing, via spliceosome; TAS:Reactome.
OntologiesGO GO:0006289; P:nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0032481; P:positive regulation of type I interferon production; TAS:Reactome.
OntologiesGO GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.
OntologiesGO GO:0008380; P:RNA splicing; TAS:Reactome.
OntologiesGO GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.
OntologiesGO GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.
OntologiesGO GO:0006360; P:transcription from RNA polymerase I promoter; IBA:GOC.
OntologiesGO GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0006383; P:transcription from RNA polymerase III promoter; TAS:Reactome.
OntologiesGO GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
Proteomic databasesMaxQB P61218; -.
Proteomic databasesPaxDb P61218; -.
Proteomic databasesPRIDE P61218; -.
Family and domain databasesGene3D 3.90.940.10; -; 1.
Family and domain databasesInterPro IPR020708; DNA-dir_RNA_polK_14-18kDa_CS.
Family and domain databasesInterPro IPR006110; Pol_omega/K/RPB6.
Family and domain databasesInterPro IPR012293; RNAP_RPB6_omega.
Family and domain databasesInterPro IPR028363; RPB6.
Family and domain databasesInterPro IPR006111; RpoK/Rpb6.
Family and domain databasesPANTHER PTHR10773; PTHR10773; 1.
Family and domain databasesPfam PF01192; RNA_pol_Rpb6; 1.
Family and domain databasesPIRSF PIRSF500154; RPB6; 1.
Family and domain databasesPIRSF PIRSF000778; RpoK/RPB6; 1.
Family and domain databasesPROSITE PS01111; RNA_POL_K_14KD; 1.
Family and domain databasesSUPFAM SSF63562; SSF63562; 1.
PTM databasesPhosphoSite P61218; -.
Protein-protein interaction databasesBioGrid 111431; 21.
Protein-protein interaction databasesIntAct P61218; 7.
Protein-protein interaction databasesSTRING 9606.ENSP00000403852; -.
Enzyme and pathway databasesReactome REACT_1036; RNA Polymerase III Transcription Initiation From Type 2 Promoter.
Enzyme and pathway databasesReactome REACT_1074; RNA Polymerase I Transcription Termination.
Enzyme and pathway databasesReactome REACT_12417; MicroRNA (miRNA) biogenesis.
Enzyme and pathway databasesReactome REACT_125; Processing of Capped Intron-Containing Pre-mRNA.
Enzyme and pathway databasesReactome REACT_1470; mRNA Capping.
Enzyme and pathway databasesReactome REACT_1628; Transcription-coupled NER (TC-NER).
Enzyme and pathway databasesReactome REACT_1655; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening.
Enzyme and pathway databasesReactome REACT_1753; mRNA Splicing - Minor Pathway.
Enzyme and pathway databasesReactome REACT_1851; RNA Polymerase II Transcription Initiation.
Enzyme and pathway databasesReactome REACT_1913; RNA Polymerase I Promoter Escape.
Enzyme and pathway databasesReactome REACT_1941; Formation of transcription-coupled NER (TC-NER) repair complex.
Enzyme and pathway databasesReactome REACT_200856; NoRC negatively regulates rRNA expression.
Enzyme and pathway databasesReactome REACT_2089; RNA Polymerase II Promoter Escape.
Enzyme and pathway databasesReactome REACT_2204; RNA Polymerase I Chain Elongation.
Enzyme and pathway databasesReactome REACT_22107; RNA Polymerase II Pre-transcription Events.
Enzyme and pathway databasesReactome REACT_22201; Formation of HIV elongation complex in the absence of HIV Tat.
Enzyme and pathway databasesReactome REACT_2222; Dual incision reaction in TC-NER.
Enzyme and pathway databasesReactome REACT_22339; RNA Polymerase III Abortive And Retractive Initiation.
Enzyme and pathway databasesReactome REACT_267668; Transcriptional regulation by small RNAs.
Enzyme and pathway databasesReactome REACT_347; RNA Polymerase III Transcription Initiation From Type 1 Promoter.
Enzyme and pathway databasesReactome REACT_467; mRNA Splicing - Major Pathway.
Enzyme and pathway databasesReactome REACT_571; RNA Polymerase III Transcription Initiation From Type 3 Promoter.
Enzyme and pathway databasesReactome REACT_6143; Pausing and recovery of Tat-mediated HIV elongation.
Enzyme and pathway databasesReactome REACT_6162; Tat-mediated elongation of the HIV-1 transcript.
Enzyme and pathway databasesReactome REACT_6233; Transcription of the HIV genome.
Enzyme and pathway databasesReactome REACT_6237; RNA Pol II CTD phosphorylation and interaction with CE.
Enzyme and pathway databasesReactome REACT_6244; Pausing and recovery of HIV elongation.
Enzyme and pathway databasesReactome REACT_6253; RNA Polymerase II HIV Promoter Escape.
Enzyme and pathway databasesReactome REACT_6259; HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6261; Abortive elongation of HIV-1 transcript in the absence of Tat.
Enzyme and pathway databasesReactome REACT_63; RNA Polymerase III Transcription Termination.
Enzyme and pathway databasesReactome REACT_6319; Formation of the HIV-1 Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_6332; HIV Transcription Initiation.
Enzyme and pathway databasesReactome REACT_6344; Tat-mediated HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6346; Formation of HIV-1 elongation complex containing HIV-1 Tat.
Enzyme and pathway databasesReactome REACT_6354; Viral Messenger RNA Synthesis.
Enzyme and pathway databasesReactome REACT_756; RNA Polymerase III Chain Elongation.
Enzyme and pathway databasesReactome REACT_833; RNA Polymerase II Transcription Elongation.
Enzyme and pathway databasesReactome REACT_834; RNA Polymerase II Transcription Initiation And Promoter Clearance.
Enzyme and pathway databasesReactome REACT_846; Formation of the Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_953; RNA Polymerase I Transcription Initiation.
Enzyme and pathway databasesReactome REACT_975; RNA Pol II CTD phosphorylation and interaction with CE.
3D structure databasesPDB 1QKL; NMR; -; A=1-127.
3D structure databasesPDBsum 1QKL; -.
3D structure databasesProteinModelPortal P61218; -.
3D structure databasesSMR P61218; 1-127.
Protocols and materials databasesDNASU 5435; -.
Phylogenomic databaseseggNOG COG1758; -.
Phylogenomic databasesGeneTree ENSGT00390000010415; -.
Phylogenomic databasesHOGENOM HOG000225272; -.
Phylogenomic databasesHOVERGEN HBG002375; -.
Phylogenomic databasesInParanoid P61218; -.
Phylogenomic databasesKO K03014; -.
Phylogenomic databasesOMA MKYERAR; -.
Phylogenomic databasesOrthoDB EOG757D0G; -.
Phylogenomic databasesPhylomeDB P61218; -.
Phylogenomic databasesTreeFam TF103041; -.
Organism-specific databasesCTD 5435; -.
Organism-specific databasesGeneCards GC22P038348; -.
Organism-specific databasesHGNC HGNC:9193; POLR2F.
Organism-specific databasesHPA CAB009882; -.
Organism-specific databasesHPA HPA000827; -.
Organism-specific databasesMIM 604414; gene.
Organism-specific databasesneXtProt NX_P61218; -.
Organism-specific databasesPharmGKB PA33513; -.
OtherChiTaRS POLR2F; human.
OtherEvolutionaryTrace P61218; -.
OtherGeneWiki POLR2F; -.
OtherGenomeRNAi 5435; -.
OtherNextBio 21029; -.
OtherPRO PR:P61218; -.



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