Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 5436
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000301788; ENSP00000301788; ENSG00000168002.
Genome annotation databasesGeneID 5436; -.
Genome annotation databasesKEGG hsa:5436; -.
Genome annotation databasesUCSC uc001nva.3; human.
Sequence databasesCCDS CCDS31585.1; -.
Sequence databasesEMBL U20659; AAA86500.1; -; mRNA.
Sequence databasesEMBL U52427; AAB96827.1; -; Genomic_DNA.
Sequence databasesEMBL AK312131; BAG35067.1; -; mRNA.
Sequence databasesEMBL CH471076; EAW74092.1; -; Genomic_DNA.
Sequence databasesEMBL BC112162; AAI12163.1; -; mRNA.
Sequence databasesEMBL BC112164; AAI12165.1; -; mRNA.
Sequence databasesRefSeq NP_002687.1; NM_002696.2.
Sequence databasesUniGene Hs.14839; -.
Polymorphism databasesDMDM 50403601; -.
Gene expression databasesBgee P62487; -.
Gene expression databasesCleanEx HS_POLR2G; -.
Gene expression databasesExpressionAtlas P62487; baseline and differential.
Gene expression databasesGenevestigator P62487; -.
OntologiesGO GO:0000932; C:cytoplasmic mRNA processing body; IBA:RefGenome.
OntologiesGO GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
OntologiesGO GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.
OntologiesGO GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
OntologiesGO GO:0031369; F:translation initiation factor binding; IBA:RefGenome.
OntologiesGO GO:0006370; P:7-methylguanosine mRNA capping; TAS:Reactome.
OntologiesGO GO:0006915; P:apoptotic process; IEA:Ensembl.
OntologiesGO GO:0006281; P:DNA repair; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0000398; P:mRNA splicing, via spliceosome; TAS:Reactome.
OntologiesGO GO:0000291; P:nuclear-transcribed mRNA catabolic process, exonucleolytic; IBA:RefGenome.
OntologiesGO GO:0006289; P:nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; IBA:RefGenome.
OntologiesGO GO:0045948; P:positive regulation of translational initiation; IBA:RefGenome.
OntologiesGO GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.
OntologiesGO GO:0008380; P:RNA splicing; TAS:Reactome.
OntologiesGO GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0006367; P:transcription initiation from RNA polymerase II promoter; IBA:RefGenome.
OntologiesGO GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
Proteomic databasesMaxQB P62487; -.
Proteomic databasesPaxDb P62487; -.
Proteomic databasesPeptideAtlas P62487; -.
Proteomic databasesPRIDE P62487; -.
Family and domain databasesGene3D 2.40.50.140; -; 1.
Family and domain databasesGene3D 3.30.1490.120; -; 1.
Family and domain databasesInterPro IPR012340; NA-bd_OB-fold.
Family and domain databasesInterPro IPR003029; Rbsml_prot_S1_RNA-bd_dom.
Family and domain databasesInterPro IPR005576; RNA_pol_Rpb7_N.
Family and domain databasesInterPro IPR022967; S1_dom.
Family and domain databasesPfam PF00575; S1; 1.
Family and domain databasesPfam PF03876; SHS2_Rpb7-N; 1.
Family and domain databasesSMART SM00316; S1; 1.
Family and domain databasesSUPFAM SSF50249; SSF50249; 1.
Family and domain databasesSUPFAM SSF88798; SSF88798; 1.
PTM databasesPhosphoSite P62487; -.
Protein-protein interaction databasesBioGrid 111432; 58.
Protein-protein interaction databasesDIP DIP-32663N; -.
Protein-protein interaction databasesIntAct P62487; 20.
Protein-protein interaction databasesMINT MINT-1033626; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000301788; -.
Enzyme and pathway databasesReactome REACT_12417; MicroRNA (miRNA) biogenesis.
Enzyme and pathway databasesReactome REACT_125; Processing of Capped Intron-Containing Pre-mRNA.
Enzyme and pathway databasesReactome REACT_1470; mRNA Capping.
Enzyme and pathway databasesReactome REACT_1628; Transcription-coupled NER (TC-NER).
Enzyme and pathway databasesReactome REACT_1655; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening.
Enzyme and pathway databasesReactome REACT_1753; mRNA Splicing - Minor Pathway.
Enzyme and pathway databasesReactome REACT_1851; RNA Polymerase II Transcription Initiation.
Enzyme and pathway databasesReactome REACT_1941; Formation of transcription-coupled NER (TC-NER) repair complex.
Enzyme and pathway databasesReactome REACT_2089; RNA Polymerase II Promoter Escape.
Enzyme and pathway databasesReactome REACT_22107; RNA Polymerase II Pre-transcription Events.
Enzyme and pathway databasesReactome REACT_22201; Formation of HIV elongation complex in the absence of HIV Tat.
Enzyme and pathway databasesReactome REACT_2222; Dual incision reaction in TC-NER.
Enzyme and pathway databasesReactome REACT_267668; Transcriptional regulation by small RNAs.
Enzyme and pathway databasesReactome REACT_467; mRNA Splicing - Major Pathway.
Enzyme and pathway databasesReactome REACT_6143; Pausing and recovery of Tat-mediated HIV elongation.
Enzyme and pathway databasesReactome REACT_6162; Tat-mediated elongation of the HIV-1 transcript.
Enzyme and pathway databasesReactome REACT_6233; Transcription of the HIV genome.
Enzyme and pathway databasesReactome REACT_6237; RNA Pol II CTD phosphorylation and interaction with CE.
Enzyme and pathway databasesReactome REACT_6244; Pausing and recovery of HIV elongation.
Enzyme and pathway databasesReactome REACT_6253; RNA Polymerase II HIV Promoter Escape.
Enzyme and pathway databasesReactome REACT_6259; HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6261; Abortive elongation of HIV-1 transcript in the absence of Tat.
Enzyme and pathway databasesReactome REACT_6319; Formation of the HIV-1 Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_6332; HIV Transcription Initiation.
Enzyme and pathway databasesReactome REACT_6344; Tat-mediated HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6346; Formation of HIV-1 elongation complex containing HIV-1 Tat.
Enzyme and pathway databasesReactome REACT_6354; Viral Messenger RNA Synthesis.
Enzyme and pathway databasesReactome REACT_833; RNA Polymerase II Transcription Elongation.
Enzyme and pathway databasesReactome REACT_834; RNA Polymerase II Transcription Initiation And Promoter Clearance.
Enzyme and pathway databasesReactome REACT_846; Formation of the Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_975; RNA Pol II CTD phosphorylation and interaction with CE.
3D structure databasesPDB 2C35; X-ray; 2.70 A; B/D/F/H=1-172.
3D structure databasesPDBsum 2C35; -.
3D structure databasesProteinModelPortal P62487; -.
3D structure databasesSMR P62487; 1-171.
Phylogenomic databaseseggNOG COG1095; -.
Phylogenomic databasesGeneTree ENSGT00390000008975; -.
Phylogenomic databasesHOGENOM HOG000158201; -.
Phylogenomic databasesHOVERGEN HBG055233; -.
Phylogenomic databasesInParanoid P62487; -.
Phylogenomic databasesKO K03015; -.
Phylogenomic databasesOMA NNVNKMG; -.
Phylogenomic databasesOrthoDB EOG76MK9S; -.
Phylogenomic databasesPhylomeDB P62487; -.
Phylogenomic databasesTreeFam TF103042; -.
Organism-specific databasesCTD 5436; -.
Organism-specific databasesGeneCards GC11P062529; -.
Organism-specific databasesHGNC HGNC:9194; POLR2G.
Organism-specific databasesHPA HPA053000; -.
Organism-specific databasesMIM 602013; gene.
Organism-specific databasesneXtProt NX_P62487; -.
Organism-specific databasesPharmGKB PA33514; -.
OtherChiTaRS POLR2G; human.
OtherEvolutionaryTrace P62487; -.
OtherGeneWiki POLR2G; -.
OtherGenomeRNAi 5436; -.
OtherNextBio 21033; -.
OtherPRO PR:P62487; -.



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