Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 5438
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000221859; ENSP00000221859; ENSG00000105258.
Genome annotation databasesGeneID 5438; -.
Genome annotation databasesKEGG hsa:5438; -.
Genome annotation databasesUCSC uc002ode.3; human.
Sequence databasesCCDS CCDS12487.1; -.
Sequence databasesEMBL Z23102; CAA80649.1; -; Genomic_DNA.
Sequence databasesEMBL AK312206; BAG35139.1; -; mRNA.
Sequence databasesEMBL AD001527; AAB51181.1; -; Genomic_DNA.
Sequence databasesEMBL BC017112; AAH17112.1; -; mRNA.
Sequence databasesEMBL BC067794; AAH67794.1; -; mRNA.
Sequence databasesPIR S41621; S41621.
Sequence databasesRefSeq NP_006224.1; NM_006233.4.
Sequence databasesUniGene Hs.47062; -.
Polymorphism databasesDMDM 548702; -.
Gene expression databasesBgee P36954; -.
Gene expression databasesCleanEx HS_POLR2I; -.
Gene expression databasesExpressionAtlas P36954; baseline and differential.
Gene expression databasesGenevestigator P36954; -.
OntologiesGO GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0003677; F:DNA binding; IEA:InterPro.
OntologiesGO GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.
OntologiesGO GO:0008270; F:zinc ion binding; TAS:ProtInc.
OntologiesGO GO:0006370; P:7-methylguanosine mRNA capping; TAS:Reactome.
OntologiesGO GO:0006281; P:DNA repair; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0001193; P:maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase II promoter; IBA:RefGenome.
OntologiesGO GO:0000398; P:mRNA splicing, via spliceosome; TAS:Reactome.
OntologiesGO GO:0006289; P:nucleotide-excision repair; TAS:Reactome.
OntologiesGO GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.
OntologiesGO GO:0008380; P:RNA splicing; TAS:Reactome.
OntologiesGO GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.
OntologiesGO GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0006367; P:transcription initiation from RNA polymerase II promoter; IBA:RefGenome.
OntologiesGO GO:0006283; P:transcription-coupled nucleotide-excision repair; IBA:RefGenome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
Proteomic databasesMaxQB P36954; -.
Proteomic databasesPaxDb P36954; -.
Proteomic databasesPeptideAtlas P36954; -.
Proteomic databasesPRIDE P36954; -.
Family and domain databasesInterPro IPR019761; DNA-dir_RNA_pol-M_15_CS.
Family and domain databasesInterPro IPR001529; DNA-dir_RNA_pol_M/15kDasu.
Family and domain databasesInterPro IPR012164; DNA-dir_RNApol_C11.
Family and domain databasesInterPro IPR001222; Znf_TFIIS.
Family and domain databasesPfam PF02150; RNA_POL_M_15KD; 1.
Family and domain databasesPfam PF01096; TFIIS_C; 1.
Family and domain databasesPIRSF PIRSF005586; RNApol_RpoM; 1.
Family and domain databasesPROSITE PS01030; RNA_POL_M_15KD; 1.
Family and domain databasesPROSITE PS00466; ZF_TFIIS_1; 1.
Family and domain databasesPROSITE PS51133; ZF_TFIIS_2; 1.
Family and domain databasesSMART SM00661; RPOL9; 1.
Family and domain databasesSMART SM00440; ZnF_C2C2; 1.
PTM databasesPhosphoSite P36954; -.
Protein-protein interaction databasesBioGrid 111434; 25.
Protein-protein interaction databasesDIP DIP-32917N; -.
Protein-protein interaction databasesIntAct P36954; 6.
Protein-protein interaction databasesSTRING 9606.ENSP00000221859; -.
Enzyme and pathway databasesReactome REACT_12417; MicroRNA (miRNA) biogenesis.
Enzyme and pathway databasesReactome REACT_125; Processing of Capped Intron-Containing Pre-mRNA.
Enzyme and pathway databasesReactome REACT_1470; mRNA Capping.
Enzyme and pathway databasesReactome REACT_1628; Transcription-coupled NER (TC-NER).
Enzyme and pathway databasesReactome REACT_1655; RNA Polymerase II Transcription Pre-Initiation And Promoter Opening.
Enzyme and pathway databasesReactome REACT_1753; mRNA Splicing - Minor Pathway.
Enzyme and pathway databasesReactome REACT_1851; RNA Polymerase II Transcription Initiation.
Enzyme and pathway databasesReactome REACT_1941; Formation of transcription-coupled NER (TC-NER) repair complex.
Enzyme and pathway databasesReactome REACT_2089; RNA Polymerase II Promoter Escape.
Enzyme and pathway databasesReactome REACT_22107; RNA Polymerase II Pre-transcription Events.
Enzyme and pathway databasesReactome REACT_22201; Formation of HIV elongation complex in the absence of HIV Tat.
Enzyme and pathway databasesReactome REACT_2222; Dual incision reaction in TC-NER.
Enzyme and pathway databasesReactome REACT_267668; Transcriptional regulation by small RNAs.
Enzyme and pathway databasesReactome REACT_467; mRNA Splicing - Major Pathway.
Enzyme and pathway databasesReactome REACT_6143; Pausing and recovery of Tat-mediated HIV elongation.
Enzyme and pathway databasesReactome REACT_6162; Tat-mediated elongation of the HIV-1 transcript.
Enzyme and pathway databasesReactome REACT_6233; Transcription of the HIV genome.
Enzyme and pathway databasesReactome REACT_6237; RNA Pol II CTD phosphorylation and interaction with CE.
Enzyme and pathway databasesReactome REACT_6244; Pausing and recovery of HIV elongation.
Enzyme and pathway databasesReactome REACT_6253; RNA Polymerase II HIV Promoter Escape.
Enzyme and pathway databasesReactome REACT_6259; HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6261; Abortive elongation of HIV-1 transcript in the absence of Tat.
Enzyme and pathway databasesReactome REACT_6319; Formation of the HIV-1 Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_6332; HIV Transcription Initiation.
Enzyme and pathway databasesReactome REACT_6344; Tat-mediated HIV elongation arrest and recovery.
Enzyme and pathway databasesReactome REACT_6346; Formation of HIV-1 elongation complex containing HIV-1 Tat.
Enzyme and pathway databasesReactome REACT_6354; Viral Messenger RNA Synthesis.
Enzyme and pathway databasesReactome REACT_833; RNA Polymerase II Transcription Elongation.
Enzyme and pathway databasesReactome REACT_834; RNA Polymerase II Transcription Initiation And Promoter Clearance.
Enzyme and pathway databasesReactome REACT_846; Formation of the Early Elongation Complex.
Enzyme and pathway databasesReactome REACT_975; RNA Pol II CTD phosphorylation and interaction with CE.
3D structure databasesProteinModelPortal P36954; -.
3D structure databasesSMR P36954; 15-125.
Protocols and materials databasesDNASU 5438; -.
Phylogenomic databaseseggNOG COG1594; -.
Phylogenomic databasesGeneTree ENSGT00550000075063; -.
Phylogenomic databasesHOGENOM HOG000228134; -.
Phylogenomic databasesHOVERGEN HBG009981; -.
Phylogenomic databasesInParanoid P36954; -.
Phylogenomic databasesKO K03017; -.
Phylogenomic databasesOMA MHEIDEL; -.
Phylogenomic databasesOrthoDB EOG7BW0M6; -.
Phylogenomic databasesPhylomeDB P36954; -.
Phylogenomic databasesTreeFam TF103032; -.
Organism-specific databasesCTD 5438; -.
Organism-specific databasesGeneCards GC19M036604; -.
Organism-specific databasesHGNC HGNC:9196; POLR2I.
Organism-specific databasesHPA HPA045156; -.
Organism-specific databasesMIM 180662; gene.
Organism-specific databasesneXtProt NX_P36954; -.
Organism-specific databasesPharmGKB PA33516; -.
OtherChiTaRS POLR2I; human.
OtherGeneWiki POLR2I; -.
OtherGenomeRNAi 5438; -.
OtherNextBio 21041; -.
OtherPMAP-CutDB P36954; -.
OtherPRO PR:P36954; -.



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