Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 10411
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000389212; ENSP00000373864; ENSG00000079337. [O95398-1]
Genome annotation databasesEnsembl ENST00000395358; ENSP00000378764; ENSG00000079337. [O95398-2]
Genome annotation databasesEnsembl ENST00000405493; ENSP00000384521; ENSG00000079337. [O95398-3]
Genome annotation databasesEnsembl ENST00000449771; ENSP00000395708; ENSG00000079337. [O95398-1]
Genome annotation databasesEnsembl ENST00000549151; ENSP00000448619; ENSG00000079337. [O95398-3]
Genome annotation databasesGeneID 10411; -.
Genome annotation databasesKEGG hsa:10411; -.
Genome annotation databasesUCSC uc001rpz.4; human. [O95398-1]
Genome annotation databasesUCSC uc001rqb.3; human. [O95398-2]
Genome annotation databasesUCSC uc009zkp.3; human.
Sequence databasesCCDS CCDS31784.1; -. [O95398-3]
Sequence databasesCCDS CCDS41775.1; -. [O95398-1]
Sequence databasesEMBL U78168; AAD12740.1; ALT_INIT; mRNA.
Sequence databasesEMBL U78169; AAD02890.1; ALT_INIT; mRNA.
Sequence databasesEMBL AK290230; BAF82919.1; -; mRNA.
Sequence databasesEMBL AC004241; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL AC137054; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471111; EAW57944.1; -; Genomic_DNA.
Sequence databasesEMBL BC017728; AAH17728.2; -; mRNA.
Sequence databasesEMBL AF103905; AAC83381.1; -; mRNA.
Sequence databasesRefSeq NP_001092002.1; NM_001098532.2.
Sequence databasesRefSeq NP_006096.2; NM_006105.5.
Sequence databasesUniGene Hs.8578; -.
Gene expression databasesBgee O95398; -.
Gene expression databasesCleanEx HS_RAPGEF3; -.
Gene expression databasesExpressionAtlas O95398; baseline and differential.
Gene expression databasesGenevestigator O95398; -.
OntologiesGO GO:0005952; C:cAMP-dependent protein kinase complex; IEA:InterPro.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0016020; C:membrane; TAS:ProtInc.
OntologiesGO GO:0005886; C:plasma membrane; TAS:Reactome.
OntologiesGO GO:0030552; F:cAMP binding; IEA:UniProtKB-KW.
OntologiesGO GO:0008603; F:cAMP-dependent protein kinase regulator activity; IEA:InterPro.
OntologiesGO GO:0005085; F:guanyl-nucleotide exchange factor activity; TAS:ProtInc.
OntologiesGO GO:0017034; F:Rap guanyl-nucleotide exchange factor activity; IMP:UniProtKB.
OntologiesGO GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.
OntologiesGO GO:0007596; P:blood coagulation; TAS:Reactome.
OntologiesGO GO:0019933; P:cAMP-mediated signaling; NAS:BHF-UCL.
OntologiesGO GO:0008283; P:cell proliferation; TAS:ProtInc.
OntologiesGO GO:0071320; P:cellular response to cAMP; IDA:UniProtKB.
OntologiesGO GO:0006112; P:energy reserve metabolic process; TAS:Reactome.
OntologiesGO GO:0061028; P:establishment of endothelial barrier; IMP:UniProtKB.
OntologiesGO GO:0030168; P:platelet activation; TAS:Reactome.
OntologiesGO GO:0045766; P:positive regulation of angiogenesis; IMP:UniProtKB.
OntologiesGO GO:0030822; P:positive regulation of cAMP catabolic process; NAS:BHF-UCL.
OntologiesGO GO:0032854; P:positive regulation of Rap GTPase activity; IMP:UniProtKB.
OntologiesGO GO:0051496; P:positive regulation of stress fiber assembly; IMP:UniProtKB.
OntologiesGO GO:0032486; P:Rap protein signal transduction; IMP:UniProtKB.
OntologiesGO GO:2000249; P:regulation of actin cytoskeleton reorganization; IMP:UniProtKB.
OntologiesGO GO:0050796; P:regulation of insulin secretion; TAS:Reactome.
OntologiesGO GO:0007165; P:signal transduction; TAS:ProtInc.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB O95398; -.
Proteomic databasesPaxDb O95398; -.
Proteomic databasesPRIDE O95398; -.
Family and domain databasesGene3D 1.10.10.10; -; 1.
Family and domain databasesGene3D 1.10.840.10; -; 1.
Family and domain databasesGene3D 2.60.120.10; -; 1.
Family and domain databasesInterPro IPR002373; cAMP/cGMP_kin.
Family and domain databasesInterPro IPR018490; cNMP-bd-like.
Family and domain databasesInterPro IPR000595; cNMP-bd_dom.
Family and domain databasesInterPro IPR000591; DEP_dom.
Family and domain databasesInterPro IPR000651; Ras-like_Gua-exchang_fac_N.
Family and domain databasesInterPro IPR019804; Ras_G-nucl-exch_fac_CS.
Family and domain databasesInterPro IPR023578; Ras_GEF_dom.
Family and domain databasesInterPro IPR001895; RASGEF_cat_dom.
Family and domain databasesInterPro IPR014710; RmlC-like_jellyroll.
Family and domain databasesInterPro IPR029071; Ubiquitin-rel_dom.
Family and domain databasesInterPro IPR011991; WHTH_DNA-bd_dom.
Family and domain databasesPfam PF00027; cNMP_binding; 1.
Family and domain databasesPfam PF00610; DEP; 1.
Family and domain databasesPfam PF00617; RasGEF; 1.
Family and domain databasesPfam PF00618; RasGEF_N; 1.
Family and domain databasesPRINTS PR00103; CAMPKINASE.
Family and domain databasesPROSITE PS50042; CNMP_BINDING_3; 1.
Family and domain databasesPROSITE PS50186; DEP; 1.
Family and domain databasesPROSITE PS00720; RASGEF; 1.
Family and domain databasesPROSITE PS50009; RASGEF_CAT; 1.
Family and domain databasesPROSITE PS50212; RASGEF_NTER; 1.
Family and domain databasesSMART SM00100; cNMP; 1.
Family and domain databasesSMART SM00049; DEP; 1.
Family and domain databasesSMART SM00147; RasGEF; 1.
Family and domain databasesSMART SM00229; RasGEFN; 1.
Family and domain databasesSUPFAM SSF48366; SSF48366; 3.
Family and domain databasesSUPFAM SSF51206; SSF51206; 1.
Family and domain databasesSUPFAM SSF54236; SSF54236; 1.
PTM databasesPhosphoSite O95398; -.
Protein-protein interaction databasesIntAct O95398; 3.
Protein-protein interaction databasesMINT MINT-6741771; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000395708; -.
Enzyme and pathway databasesReactome REACT_15523; Integrin alphaIIb beta3 signaling.
Enzyme and pathway databasesReactome REACT_18274; Glucagon-like Peptide-1 (GLP1) regulates insulin secretion.
Enzyme and pathway databasesReactome REACT_18325; Regulation of insulin secretion.
Enzyme and pathway databasesReactome REACT_23898; Rap1 signalling.
3D structure databasesProteinModelPortal O95398; -.
3D structure databasesSMR O95398; 89-923.
Phylogenomic databaseseggNOG COG0664; -.
Phylogenomic databasesGeneTree ENSGT00770000120448; -.
Phylogenomic databasesHOGENOM HOG000230545; -.
Phylogenomic databasesInParanoid O95398; -.
Phylogenomic databasesKO K08014; -.
Phylogenomic databasesOMA NSFFAVM; -.
Phylogenomic databasesOrthoDB EOG7ZD1TF; -.
Phylogenomic databasesPhylomeDB O95398; -.
Phylogenomic databasesTreeFam TF313184; -.
Organism-specific databasesCTD 10411; -.
Organism-specific databasesGeneCards GC12M048128; -.
Organism-specific databasesHGNC HGNC:16629; RAPGEF3.
Organism-specific databasesHPA CAB004386; -.
Organism-specific databasesHPA HPA040365; -.
Organism-specific databasesHPA HPA043518; -.
Organism-specific databasesMIM 606057; gene.
Organism-specific databasesneXtProt NX_O95398; -.
Organism-specific databasesPharmGKB PA134910959; -.
ChemistryChEMBL CHEMBL2029197; -.
OtherChiTaRS RAPGEF3; human.
OtherGeneWiki RAPGEF3; -.
OtherGenomeRNAi 10411; -.
OtherNextBio 13603411; -.
OtherPRO PR:O95398; -.



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