Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6135
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000374550; ENSP00000363676; ENSG00000142676. [P62913-1]
Genome annotation databasesGeneID 6135; -.
Genome annotation databasesKEGG hsa:6135; -.
Genome annotation databasesUCSC uc001bhk.3; human.
Genome annotation databasesUCSC uc001bhl.3; human. [P62913-2]
Sequence databasesCCDS CCDS238.1; -.
Sequence databasesEMBL X79234; CAA55816.1; -; mRNA.
Sequence databasesEMBL L05092; AAC15856.1; -; mRNA.
Sequence databasesEMBL AF101385; AAD20460.3; -; Genomic_DNA.
Sequence databasesEMBL BC018970; AAH18970.1; -; mRNA.
Sequence databasesEMBL AF432212; AAL99919.1; -; mRNA.
Sequence databasesEMBL AB007171; BAA25831.1; -; Genomic_DNA.
Sequence databasesPIR S45049; S45049.
Sequence databasesRefSeq NP_000966.2; NM_000975.3. [P62913-1]
Sequence databasesRefSeq NP_001186731.1; NM_001199802.1. [P62913-2]
Sequence databasesUniGene Hs.719951; -.
Polymorphism databasesDMDM 51702795; -.
Gene expression databasesBgee P62913; -.
Gene expression databasesCleanEx HS_RPL11; -.
Gene expression databasesExpressionAtlas P62913; baseline and differential.
Gene expression databasesGenevestigator P62913; -.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005730; C:nucleolus; IDA:UniProtKB.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0003723; F:RNA binding; TAS:ProtInc.
OntologiesGO GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
OntologiesGO GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0034504; P:protein localization to nucleus; ISS:UniProtKB.
OntologiesGO GO:0006605; P:protein targeting; IMP:UniProtKB.
OntologiesGO GO:0042273; P:ribosomal large subunit biogenesis; IMP:UniProtKB.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006364; P:rRNA processing; IMP:UniProtKB.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; NAS:UniProtKB.
OntologiesGO GO:0006414; P:translational elongation; TAS:Reactome.
OntologiesGO GO:0006413; P:translational initiation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
OntologiesGO GO:0019058; P:viral life cycle; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
OntologiesGO GO:0019083; P:viral transcription; TAS:Reactome.
Proteomic databasesMaxQB P62913; -.
Proteomic databasesPaxDb P62913; -.
Proteomic databasesPRIDE P62913; -.
Family and domain databasesGene3D 3.30.1440.10; -; 1.
Family and domain databasesInterPro IPR002132; Ribosomal_L5.
Family and domain databasesInterPro IPR020929; Ribosomal_L5_CS.
Family and domain databasesInterPro IPR022803; Ribosomal_L5_domain.
Family and domain databasesPANTHER PTHR11994; PTHR11994; 1.
Family and domain databasesPfam PF00281; Ribosomal_L5; 1.
Family and domain databasesPfam PF00673; Ribosomal_L5_C; 1.
Family and domain databasesPIRSF PIRSF002161; Ribosomal_L5; 1.
Family and domain databasesPROSITE PS00358; RIBOSOMAL_L5; 1.
Family and domain databasesSUPFAM SSF55282; SSF55282; 1.
PTM databasesPhosphoSite P62913; -.
Protein-protein interaction databasesBioGrid 112055; 144.
Protein-protein interaction databasesIntAct P62913; 32.
Protein-protein interaction databasesMINT MINT-1140097; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000363676; -.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_1404; Peptide chain elongation.
Enzyme and pathway databasesReactome REACT_1797; Formation of a pool of free 40S subunits.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_2085; GTP hydrolysis and joining of the 60S ribosomal subunit.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_79; L13a-mediated translational silencing of Ceruloplasmin expression.
Enzyme and pathway databasesReactome REACT_9491; Viral mRNA Translation.
2D gel databasesSWISS-2DPAGE P62913; -.
3D structure databasesPDB 3J3B; EM; 5.00 A; J=1-178.
3D structure databasesPDBsum 3J3B; -.
3D structure databasesProteinModelPortal P62913; -.
3D structure databasesSMR P62913; 9-176.
Protocols and materials databasesDNASU 6135; -.
Phylogenomic databaseseggNOG COG0094; -.
Phylogenomic databasesHOGENOM HOG000231312; -.
Phylogenomic databasesHOVERGEN HBG055214; -.
Phylogenomic databasesInParanoid P62913; -.
Phylogenomic databasesKO K02868; -.
Phylogenomic databasesOMA EDTMAWF; -.
Phylogenomic databasesOrthoDB EOG7ZPNMB; -.
Phylogenomic databasesPhylomeDB P62913; -.
Phylogenomic databasesTreeFam TF300017; -.
Organism-specific databasesCTD 6135; -.
Organism-specific databasesGeneCards GC01P024018; -.
Organism-specific databasesGeneReviews RPL11; -.
Organism-specific databasesHGNC HGNC:10301; RPL11.
Organism-specific databasesHPA HPA002734; -.
Organism-specific databasesMIM 604175; gene.
Organism-specific databasesMIM 612562; phenotype.
Organism-specific databasesneXtProt NX_P62913; -.
Organism-specific databasesOrphanet 124; Blackfan-Diamond anemia.
Organism-specific databasesPharmGKB PA34664; -.
OtherChiTaRS RPL11; human.
OtherGeneWiki RPL11; -.
OtherGenomeRNAi 6135; -.
OtherNextBio 23831; -.
OtherPMAP-CutDB P62913; -.
OtherPRO PR:P62913; -.



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