Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6124
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000307961; ENSP00000311430; ENSG00000174444.
Genome annotation databasesGeneID 6124; -.
Genome annotation databasesKEGG hsa:6124; -.
Genome annotation databasesUCSC uc002apv.3; human.
Sequence databasesCCDS CCDS10218.1; -.
Sequence databasesEMBL L20868; AAA60281.2; -; mRNA.
Sequence databasesEMBL D23660; BAA04887.1; -; mRNA.
Sequence databasesEMBL AB061820; BAB79458.1; -; Genomic_DNA.
Sequence databasesEMBL AK291117; BAF83806.1; -; mRNA.
Sequence databasesEMBL AK291859; BAF84548.1; -; mRNA.
Sequence databasesEMBL CH471082; EAW77776.1; -; Genomic_DNA.
Sequence databasesEMBL BC001365; AAH01365.1; -; mRNA.
Sequence databasesEMBL BC005817; AAH05817.1; -; mRNA.
Sequence databasesEMBL BC007748; AAH07748.1; -; mRNA.
Sequence databasesEMBL BC007996; AAH07996.1; -; mRNA.
Sequence databasesEMBL BC009888; AAH09888.1; -; mRNA.
Sequence databasesEMBL BC010151; AAH10151.1; -; mRNA.
Sequence databasesEMBL BC014653; AAH14653.1; -; mRNA.
Sequence databasesEMBL BC066925; AAH66925.1; -; mRNA.
Sequence databasesEMBL BC095427; AAH95427.1; -; mRNA.
Sequence databasesPIR T09551; T09551.
Sequence databasesRefSeq NP_000959.2; NM_000968.3.
Sequence databasesUniGene Hs.186350; -.
Sequence databasesUniGene Hs.644628; -.
Polymorphism databasesDMDM 22002063; -.
Gene expression databasesBgee P36578; -.
Gene expression databasesCleanEx HS_RPL4; -.
Gene expression databasesExpressionAtlas P36578; baseline and differential.
Gene expression databasesGenevestigator P36578; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0005925; C:focal adhesion; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProt.
OntologiesGO GO:0030529; C:ribonucleoprotein complex; IDA:MGI.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0003723; F:RNA binding; TAS:ProtInc.
OntologiesGO GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; NAS:UniProtKB.
OntologiesGO GO:0006414; P:translational elongation; TAS:Reactome.
OntologiesGO GO:0006413; P:translational initiation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
OntologiesGO GO:0019058; P:viral life cycle; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
OntologiesGO GO:0019083; P:viral transcription; TAS:Reactome.
Proteomic databasesMaxQB P36578; -.
Proteomic databasesPaxDb P36578; -.
Proteomic databasesPRIDE P36578; -.
Family and domain databasesGene3D 3.40.1370.10; -; 1.
Family and domain databasesInterPro IPR025755; Ribos_L4_C_dom.
Family and domain databasesInterPro IPR002136; Ribosomal_L4/L1e.
Family and domain databasesInterPro IPR013000; Ribosomal_L4/L1e_euk/arc_CS.
Family and domain databasesInterPro IPR023574; Ribosomal_L4_dom.
Family and domain databasesPfam PF14374; Ribos_L4_asso_C; 1.
Family and domain databasesPfam PF00573; Ribosomal_L4; 1.
Family and domain databasesPROSITE PS00939; RIBOSOMAL_L1E; 1.
Family and domain databasesSUPFAM SSF52166; SSF52166; 1.
PTM databasesPhosphoSite P36578; -.
Protein-protein interaction databasesBioGrid 112044; 144.
Protein-protein interaction databasesDIP DIP-27559N; -.
Protein-protein interaction databasesIntAct P36578; 33.
Protein-protein interaction databasesMINT MINT-1034893; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000311430; -.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_1404; Peptide chain elongation.
Enzyme and pathway databasesReactome REACT_1797; Formation of a pool of free 40S subunits.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_2085; GTP hydrolysis and joining of the 60S ribosomal subunit.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_79; L13a-mediated translational silencing of Ceruloplasmin expression.
Enzyme and pathway databasesReactome REACT_9491; Viral mRNA Translation.
2D gel databasesSWISS-2DPAGE P36578; -.
3D structure databasesPDB 3J3B; EM; 5.00 A; C=1-427.
3D structure databasesPDBsum 3J3B; -.
3D structure databasesProteinModelPortal P36578; -.
3D structure databasesSMR P36578; 4-371.
Protocols and materials databasesDNASU 6124; -.
Phylogenomic databaseseggNOG COG0088; -.
Phylogenomic databasesGeneTree ENSGT00390000018145; -.
Phylogenomic databasesHOVERGEN HBG001453; -.
Phylogenomic databasesInParanoid P36578; -.
Phylogenomic databasesKO K02930; -.
Phylogenomic databasesOMA KAKMLKP; -.
Phylogenomic databasesOrthoDB EOG73RBBP; -.
Phylogenomic databasesPhylomeDB P36578; -.
Phylogenomic databasesTreeFam TF300593; -.
Organism-specific databasesCTD 6124; -.
Organism-specific databasesGeneCards GC15M066790; -.
Organism-specific databasesHGNC HGNC:10353; RPL4.
Organism-specific databasesHPA HPA034600; -.
Organism-specific databasesMIM 180479; gene.
Organism-specific databasesneXtProt NX_P36578; -.
Organism-specific databasesPharmGKB PA34749; -.
OtherChiTaRS RPL4; human.
OtherGeneWiki Ribosomal_protein_L4; -.
OtherGenomeRNAi 6124; -.
OtherNextBio 23787; -.
OtherPMAP-CutDB P36578; -.
OtherPRO PR:P36578; -.



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