Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6125
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000370321; ENSP00000359345; ENSG00000122406.
Genome annotation databasesGeneID 6125; -.
Genome annotation databasesKEGG hsa:6125; -.
Genome annotation databasesUCSC uc001doz.3; human.
Sequence databasesCCDS CCDS741.1; -.
Sequence databasesEMBL U14966; AAA85654.1; -; mRNA.
Sequence databasesEMBL AF113210; AAG39281.1; -; mRNA.
Sequence databasesEMBL AK222604; BAD96324.1; -; mRNA.
Sequence databasesEMBL AL162740; CAI22505.1; -; Genomic_DNA.
Sequence databasesEMBL BC109370; AAI09371.1; -; mRNA.
Sequence databasesEMBL U76609; AAB18361.1; -; mRNA.
Sequence databasesEMBL Z35312; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesPIR S55912; S55912.
Sequence databasesRefSeq NP_000960.2; NM_000969.3.
Sequence databasesUniGene Hs.532359; -.
Polymorphism databasesDMDM 81175191; -.
Gene expression databasesBgee P46777; -.
Gene expression databasesCleanEx HS_RPL5; -.
Gene expression databasesExpressionAtlas P46777; baseline and differential.
Gene expression databasesGenevestigator P46777; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0005925; C:focal adhesion; IDA:UniProtKB.
OntologiesGO GO:0016020; C:membrane; IDA:UniProtKB.
OntologiesGO GO:0005730; C:nucleolus; IDA:HPA.
OntologiesGO GO:0005634; C:nucleus; IDA:UniProtKB.
OntologiesGO GO:0030529; C:ribonucleoprotein complex; IDA:MGI.
OntologiesGO GO:0008097; F:5S rRNA binding; IEA:InterPro.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0003723; F:RNA binding; TAS:ProtInc.
OntologiesGO GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0042273; P:ribosomal large subunit biogenesis; IMP:UniProtKB.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006364; P:rRNA processing; IMP:UniProtKB.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; NAS:UniProtKB.
OntologiesGO GO:0006414; P:translational elongation; TAS:Reactome.
OntologiesGO GO:0006413; P:translational initiation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
OntologiesGO GO:0019058; P:viral life cycle; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
OntologiesGO GO:0019083; P:viral transcription; TAS:Reactome.
Proteomic databasesMaxQB P46777; -.
Proteomic databasesPaxDb P46777; -.
Proteomic databasesPRIDE P46777; -.
Family and domain databasesHAMAP MF_01337_A; Ribosomal_L18_A; 1.
Family and domain databasesInterPro IPR005485; Rbsml_L5_euk/L18_arc.
Family and domain databasesInterPro IPR025607; Rbsml_L5e/L18P_C.
Family and domain databasesInterPro IPR005484; Ribosomal_L18/L5.
Family and domain databasesPANTHER PTHR23410; PTHR23410; 1.
Family and domain databasesPfam PF14204; Ribosomal_L18_c; 1.
Family and domain databasesPfam PF00861; Ribosomal_L18p; 1.
Family and domain databasesPRINTS PR00058; RIBOSOMALL5.
PTM databasesPhosphoSite P46777; -.
Protein-protein interaction databasesBioGrid 112045; 166.
Protein-protein interaction databasesDIP DIP-31152N; -.
Protein-protein interaction databasesIntAct P46777; 24.
Protein-protein interaction databasesMINT MINT-1034099; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000359345; -.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_1404; Peptide chain elongation.
Enzyme and pathway databasesReactome REACT_1797; Formation of a pool of free 40S subunits.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_2085; GTP hydrolysis and joining of the 60S ribosomal subunit.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_79; L13a-mediated translational silencing of Ceruloplasmin expression.
Enzyme and pathway databasesReactome REACT_9491; Viral mRNA Translation.
3D structure databasesPDB 3J3B; EM; 5.00 A; D=1-297.
3D structure databasesPDBsum 3J3B; -.
3D structure databasesProteinModelPortal P46777; -.
3D structure databasesSMR P46777; 9-297.
Phylogenomic databaseseggNOG COG0256; -.
Phylogenomic databasesGeneTree ENSGT00390000008456; -.
Phylogenomic databasesHOVERGEN HBG009347; -.
Phylogenomic databasesInParanoid P46777; -.
Phylogenomic databasesKO K02932; -.
Phylogenomic databasesOMA VICAAYS; -.
Phylogenomic databasesOrthoDB EOG7VB2FW; -.
Phylogenomic databasesPhylomeDB P46777; -.
Phylogenomic databasesTreeFam TF300044; -.
Organism-specific databasesCTD 6125; -.
Organism-specific databasesGeneCards GC01P093297; -.
Organism-specific databasesGeneReviews RPL5; -.
Organism-specific databasesHGNC HGNC:10360; RPL5.
Organism-specific databasesHPA HPA043717; -.
Organism-specific databasesHPA HPA054444; -.
Organism-specific databasesMIM 603634; gene.
Organism-specific databasesMIM 612561; phenotype.
Organism-specific databasesneXtProt NX_P46777; -.
Organism-specific databasesOrphanet 124; Blackfan-Diamond anemia.
Organism-specific databasesPharmGKB PA34755; -.
OtherChiTaRS RPL5; human.
OtherGeneWiki Ribosomal_protein_L5; -.
OtherGenomeRNAi 6125; -.
OtherNextBio 23791; -.
OtherPRO PR:P46777; -.



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