Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6235
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000245458; ENSP00000245458; ENSG00000213741. [P62273-1]
Genome annotation databasesEnsembl ENST00000396020; ENSP00000379339; ENSG00000213741. [P62273-2]
Genome annotation databasesEnsembl ENST00000611563; ENSP00000479892; ENSG00000213741. [P62273-1]
Genome annotation databasesGeneID 6235; -.
Genome annotation databasesKEGG hsa:6235; -.
Genome annotation databasesUCSC uc001wwl.4; human. [P62273-2]
Genome annotation databasesUCSC uc001wwm.4; human. [P62273-1]
Sequence databasesCCDS CCDS32072.1; -. [P62273-2]
Sequence databasesCCDS CCDS9685.1; -. [P62273-1]
Sequence databasesEMBL U14973; AAA85661.1; -; mRNA.
Sequence databasesEMBL L31610; AAB27426.1; -; mRNA.
Sequence databasesEMBL AB061847; BAB79485.1; -; Genomic_DNA.
Sequence databasesEMBL AL139099; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL BC015974; AAH15974.2; -; mRNA.
Sequence databasesEMBL BC032813; AAH32813.1; -; mRNA.
Sequence databasesEMBL BC035313; AAH35313.1; -; mRNA.
Sequence databasesEMBL AB007165; BAA25827.1; -; Genomic_DNA.
Sequence databasesPIR S55919; S55919.
Sequence databasesRefSeq NP_001023.1; NM_001032.4. [P62273-1]
Sequence databasesRefSeq NP_001025172.1; NM_001030001.2. [P62273-2]
Sequence databasesUniGene Hs.156367; -.
Polymorphism databasesDMDM 50403626; -.
Gene expression databasesBgee P62273; -.
Gene expression databasesCleanEx HS_RPS29; -.
Gene expression databasesGenevestigator P62273; -.
OntologiesGO GO:0005737; C:cytoplasm; IDA:HPA.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0005925; C:focal adhesion; IDA:UniProtKB.
OntologiesGO GO:0015935; C:small ribosomal subunit; IDA:UniProtKB.
OntologiesGO GO:0003735; F:structural constituent of ribosome; IDA:UniProtKB.
OntologiesGO GO:0008270; F:zinc ion binding; IDA:UniProtKB.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; IC:UniProtKB.
OntologiesGO GO:0006414; P:translational elongation; TAS:Reactome.
OntologiesGO GO:0006413; P:translational initiation; TAS:Reactome.
OntologiesGO GO:0006415; P:translational termination; TAS:Reactome.
OntologiesGO GO:0019058; P:viral life cycle; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; TAS:Reactome.
OntologiesGO GO:0019083; P:viral transcription; TAS:Reactome.
Proteomic databasesMaxQB P62273; -.
Proteomic databasesPaxDb P62273; -.
Proteomic databasesPRIDE P62273; -.
Family and domain databasesInterPro IPR001209; Ribosomal_S14.
Family and domain databasesInterPro IPR018271; Ribosomal_S14_CS.
Family and domain databasesPfam PF00253; Ribosomal_S14; 1.
Family and domain databasesPROSITE PS00527; RIBOSOMAL_S14; 1.
PTM databasesPhosphoSite P62273; -.
Protein-protein interaction databasesBioGrid 112149; 53.
Protein-protein interaction databasesIntAct P62273; 7.
Protein-protein interaction databasesMINT MINT-4133209; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000379339; -.
Enzyme and pathway databasesReactome REACT_1079; Formation of the ternary complex, and subsequently, the 43S complex.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_1404; Peptide chain elongation.
Enzyme and pathway databasesReactome REACT_1797; Formation of a pool of free 40S subunits.
Enzyme and pathway databasesReactome REACT_1979; Translation initiation complex formation.
Enzyme and pathway databasesReactome REACT_1986; Eukaryotic Translation Termination.
Enzyme and pathway databasesReactome REACT_2085; GTP hydrolysis and joining of the 60S ribosomal subunit.
Enzyme and pathway databasesReactome REACT_75768; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_75822; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
Enzyme and pathway databasesReactome REACT_79; L13a-mediated translational silencing of Ceruloplasmin expression.
Enzyme and pathway databasesReactome REACT_931; Ribosomal scanning and start codon recognition.
Enzyme and pathway databasesReactome REACT_9491; Viral mRNA Translation.
3D structure databasesPDB 2ZKQ; EM; 8.70 A; n=1-56.
3D structure databasesPDB 3J3A; EM; 5.00 A; d=1-56.
3D structure databasesPDBsum 2ZKQ; -.
3D structure databasesPDBsum 3J3A; -.
3D structure databasesProteinModelPortal P62273; -.
3D structure databasesSMR P62273; 4-56.
Protocols and materials databasesDNASU 6235; -.
Phylogenomic databaseseggNOG COG0199; -.
Phylogenomic databasesGeneTree ENSGT00390000005814; -.
Phylogenomic databasesHOVERGEN HBG004459; -.
Phylogenomic databasesInParanoid P62273; -.
Phylogenomic databasesKO K02980; -.
Phylogenomic databasesOMA ACEQMED; -.
Phylogenomic databasesOrthoDB EOG78D7P4; -.
Phylogenomic databasesPhylomeDB P62273; -.
Phylogenomic databasesTreeFam TF300217; -.
Organism-specific databasesCTD 6235; -.
Organism-specific databasesGeneCards GC14M050043; -.
Organism-specific databasesHGNC HGNC:10419; RPS29.
Organism-specific databasesHPA HPA004107; -.
Organism-specific databasesMIM 603633; gene.
Organism-specific databasesMIM 615909; phenotype.
Organism-specific databasesneXtProt NX_P62273; -.
Organism-specific databasesOrphanet 124; Blackfan-Diamond anemia.
Organism-specific databasesPharmGKB PA34826; -.
OtherGeneWiki RPS29; -.
OtherGenomeRNAi 6235; -.
OtherNextBio 24205; -.
OtherPRO PR:P62273; -.



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