Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6720
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000261646; ENSP00000261646; ENSG00000072310. [P36956-1]
Genome annotation databasesEnsembl ENST00000355815; ENSP00000348069; ENSG00000072310. [P36956-4]
Genome annotation databasesGeneID 6720; -.
Genome annotation databasesKEGG hsa:6720; -.
Genome annotation databasesUCSC uc002grq.2; human. [P36956-1]
Genome annotation databasesUCSC uc002grs.2; human. [P36956-4]
Genome annotation databasesUCSC uc010cpq.1; human.
Sequence databasesCCDS CCDS11189.1; -. [P36956-1]
Sequence databasesCCDS CCDS32583.1; -. [P36956-4]
Sequence databasesEMBL U00968; AAC50051.2; -; mRNA.
Sequence databasesEMBL S66167; AAB28522.2; ALT_INIT; mRNA.
Sequence databasesEMBL S66168; AAB28523.1; -; mRNA.
Sequence databasesEMBL AB373958; BAG06742.1; -; mRNA.
Sequence databasesEMBL AB373959; BAG06743.1; -; mRNA.
Sequence databasesEMBL AC122129; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471196; EAW55689.1; -; Genomic_DNA.
Sequence databasesEMBL CH471196; EAW55690.1; -; Genomic_DNA.
Sequence databasesEMBL BC023621; AAH23621.1; -; mRNA.
Sequence databasesEMBL BC026962; AAH26962.1; -; mRNA.
Sequence databasesEMBL BC057388; AAH57388.1; -; mRNA.
Sequence databasesEMBL BC063281; AAH63281.1; -; mRNA.
Sequence databasesEMBL AB209609; BAD92846.1; ALT_SEQ; mRNA.
Sequence databasesPIR A48845; A48845.
Sequence databasesRefSeq NP_001005291.1; NM_001005291.2. [P36956-4]
Sequence databasesRefSeq NP_004167.3; NM_004176.4. [P36956-1]
Sequence databasesUniGene Hs.592123; -.
Sequence databasesUniGene Hs.733635; -.
Polymorphism databasesDMDM 166897633; -.
Gene expression databasesBgee P36956; -.
Gene expression databasesCleanEx HS_SREBF1; -.
Gene expression databasesExpressionAtlas P36956; baseline and differential.
Gene expression databasesGenevestigator P36956; -.
OntologiesGO GO:0005737; C:cytoplasm; ISS:UniProtKB.
OntologiesGO GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.
OntologiesGO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0000139; C:Golgi membrane; TAS:Reactome.
OntologiesGO GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
OntologiesGO GO:0005635; C:nuclear envelope; TAS:ProtInc.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:BHF-UCL.
OntologiesGO GO:0043234; C:protein complex; IEA:Ensembl.
OntologiesGO GO:0003682; F:chromatin binding; IEA:Ensembl.
OntologiesGO GO:0003677; F:DNA binding; ISS:UniProtKB.
OntologiesGO GO:0043565; F:sequence-specific DNA binding; IEA:Ensembl.
OntologiesGO GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:HGNC.
OntologiesGO GO:0032810; F:sterol response element binding; IDA:HGNC.
OntologiesGO GO:0007568; P:aging; IEA:Ensembl.
OntologiesGO GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.
OntologiesGO GO:0071398; P:cellular response to fatty acid; IEA:Ensembl.
OntologiesGO GO:0009267; P:cellular response to starvation; ISS:HGNC.
OntologiesGO GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
OntologiesGO GO:0007623; P:circadian rhythm; IEA:Ensembl.
OntologiesGO GO:0008286; P:insulin receptor signaling pathway; IEA:Ensembl.
OntologiesGO GO:0008610; P:lipid biosynthetic process; ISS:UniProtKB.
OntologiesGO GO:0006629; P:lipid metabolic process; TAS:ProtInc.
OntologiesGO GO:0030324; P:lung development; IEA:Ensembl.
OntologiesGO GO:0046676; P:negative regulation of insulin secretion; IEA:Ensembl.
OntologiesGO GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Ensembl.
OntologiesGO GO:0045542; P:positive regulation of cholesterol biosynthetic process; IEA:Ensembl.
OntologiesGO GO:0031065; P:positive regulation of histone deacetylation; IEA:Ensembl.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0010867; P:positive regulation of triglyceride biosynthetic process; ISS:UniProtKB.
OntologiesGO GO:0019217; P:regulation of fatty acid metabolic process; IEA:Ensembl.
OntologiesGO GO:0003062; P:regulation of heart rate by chemical signal; IEA:Ensembl.
OntologiesGO GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
OntologiesGO GO:0051591; P:response to cAMP; IEA:Ensembl.
OntologiesGO GO:0042493; P:response to drug; IEA:Ensembl.
OntologiesGO GO:0032094; P:response to food; IEA:Ensembl.
OntologiesGO GO:0033762; P:response to glucagon; IEA:Ensembl.
OntologiesGO GO:0009749; P:response to glucose; IEA:Ensembl.
OntologiesGO GO:0032570; P:response to progesterone; IEA:Ensembl.
OntologiesGO GO:0032526; P:response to retinoic acid; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
Proteomic databasesMaxQB P36956; -.
Proteomic databasesPaxDb P36956; -.
Proteomic databasesPRIDE P36956; -.
Family and domain databasesGene3D 4.10.280.10; -; 1.
Family and domain databasesInterPro IPR011598; bHLH_dom.
Family and domain databasesPfam PF00010; HLH; 1.
Family and domain databasesPROSITE PS50888; BHLH; 1.
Family and domain databasesSMART SM00353; HLH; 1.
Family and domain databasesSUPFAM SSF47459; SSF47459; 1.
PTM databasesPhosphoSite P36956; -.
Protein-protein interaction databasesBioGrid 112598; 55.
Protein-protein interaction databasesDIP DIP-331N; -.
Protein-protein interaction databasesIntAct P36956; 14.
Protein-protein interaction databasesMINT MINT-2803077; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000348069; -.
Enzyme and pathway databasesReactome REACT_116145; PPARA activates gene expression.
Enzyme and pathway databasesReactome REACT_118659; RORA activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_147797; Regulation of cholesterol biosynthesis by SREBP (SREBF).
Enzyme and pathway databasesReactome REACT_147904; Activation of gene expression by SREBF (SREBP).
Enzyme and pathway databasesReactome REACT_27161; Transcriptional regulation of white adipocyte differentiation.
Enzyme and pathway databasesSignaLink P36956; -.
3D structure databasesPDB 1AM9; X-ray; 2.30 A; A/B/C/D=319-400.
3D structure databasesPDBsum 1AM9; -.
3D structure databasesProteinModelPortal P36956; -.
3D structure databasesSMR P36956; 319-400.
Phylogenomic databaseseggNOG NOG242942; -.
Phylogenomic databasesGeneTree ENSGT00390000017651; -.
Phylogenomic databasesHOVERGEN HBG061592; -.
Phylogenomic databasesInParanoid P36956; -.
Phylogenomic databasesKO K07197; -.
Phylogenomic databasesOMA FDPPYAG; -.
Phylogenomic databasesPhylomeDB P36956; -.
Phylogenomic databasesTreeFam TF313894; -.
Organism-specific databasesCTD 6720; -.
Organism-specific databasesGeneCards GC17M017714; -.
Organism-specific databasesHGNC HGNC:11289; SREBF1.
Organism-specific databasesHPA CAB005406; -.
Organism-specific databasesMIM 184756; gene.
Organism-specific databasesneXtProt NX_P36956; -.
Organism-specific databasesPharmGKB PA335; -.
OtherChiTaRS SREBF1; human.
OtherEvolutionaryTrace P36956; -.
OtherGeneWiki SREBF1; -.
OtherGenomeRNAi 6720; -.
OtherNextBio 26212; -.
OtherPMAP-CutDB P36956; -.
OtherPRO PR:P36956; -.
Genome annotation databasesEnsembl ENST00000261646; ENSP00000261646; ENSG00000072310. [P36956-1]
Genome annotation databasesEnsembl ENST00000355815; ENSP00000348069; ENSG00000072310. [P36956-4]
Genome annotation databasesGeneID 6720; -.
Genome annotation databasesKEGG hsa:6720; -.
Genome annotation databasesUCSC uc002grq.2; human. [P36956-1]
Genome annotation databasesUCSC uc002grs.2; human. [P36956-4]
Genome annotation databasesUCSC uc010cpq.1; human.
Sequence databasesCCDS CCDS11189.1; -. [P36956-1]
Sequence databasesCCDS CCDS32583.1; -. [P36956-4]
Sequence databasesEMBL U00968; AAC50051.2; -; mRNA.
Sequence databasesEMBL S66167; AAB28522.2; ALT_INIT; mRNA.
Sequence databasesEMBL S66168; AAB28523.1; -; mRNA.
Sequence databasesEMBL AB373958; BAG06742.1; -; mRNA.
Sequence databasesEMBL AB373959; BAG06743.1; -; mRNA.
Sequence databasesEMBL AC122129; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471196; EAW55689.1; -; Genomic_DNA.
Sequence databasesEMBL CH471196; EAW55690.1; -; Genomic_DNA.
Sequence databasesEMBL BC023621; AAH23621.1; -; mRNA.
Sequence databasesEMBL BC026962; AAH26962.1; -; mRNA.
Sequence databasesEMBL BC057388; AAH57388.1; -; mRNA.
Sequence databasesEMBL BC063281; AAH63281.1; -; mRNA.
Sequence databasesEMBL AB209609; BAD92846.1; ALT_SEQ; mRNA.
Sequence databasesPIR A48845; A48845.
Sequence databasesRefSeq NP_001005291.1; NM_001005291.2. [P36956-4]
Sequence databasesRefSeq NP_004167.3; NM_004176.4. [P36956-1]
Sequence databasesUniGene Hs.592123; -.
Sequence databasesUniGene Hs.733635; -.
Polymorphism databasesDMDM 166897633; -.
Gene expression databasesBgee P36956; -.
Gene expression databasesCleanEx HS_SREBF1; -.
Gene expression databasesExpressionAtlas P36956; baseline and differential.
Gene expression databasesGenevestigator P36956; -.
OntologiesGO GO:0005737; C:cytoplasm; ISS:UniProtKB.
OntologiesGO GO:0031410; C:cytoplasmic vesicle; IEA:UniProtKB-KW.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.
OntologiesGO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0000139; C:Golgi membrane; TAS:Reactome.
OntologiesGO GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
OntologiesGO GO:0005635; C:nuclear envelope; TAS:ProtInc.
OntologiesGO GO:0005654; C:nucleoplasm; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; IDA:BHF-UCL.
OntologiesGO GO:0043234; C:protein complex; IEA:Ensembl.
OntologiesGO GO:0003682; F:chromatin binding; IEA:Ensembl.
OntologiesGO GO:0003677; F:DNA binding; ISS:UniProtKB.
OntologiesGO GO:0043565; F:sequence-specific DNA binding; IEA:Ensembl.
OntologiesGO GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:HGNC.
OntologiesGO GO:0032810; F:sterol response element binding; IDA:HGNC.
OntologiesGO GO:0007568; P:aging; IEA:Ensembl.
OntologiesGO GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.
OntologiesGO GO:0071398; P:cellular response to fatty acid; IEA:Ensembl.
OntologiesGO GO:0009267; P:cellular response to starvation; ISS:HGNC.
OntologiesGO GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
OntologiesGO GO:0007623; P:circadian rhythm; IEA:Ensembl.
OntologiesGO GO:0008286; P:insulin receptor signaling pathway; IEA:Ensembl.
OntologiesGO GO:0008610; P:lipid biosynthetic process; ISS:UniProtKB.
OntologiesGO GO:0006629; P:lipid metabolic process; TAS:ProtInc.
OntologiesGO GO:0030324; P:lung development; IEA:Ensembl.
OntologiesGO GO:0046676; P:negative regulation of insulin secretion; IEA:Ensembl.
OntologiesGO GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Ensembl.
OntologiesGO GO:0045542; P:positive regulation of cholesterol biosynthetic process; IEA:Ensembl.
OntologiesGO GO:0031065; P:positive regulation of histone deacetylation; IEA:Ensembl.
OntologiesGO GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
OntologiesGO GO:0010867; P:positive regulation of triglyceride biosynthetic process; ISS:UniProtKB.
OntologiesGO GO:0019217; P:regulation of fatty acid metabolic process; IEA:Ensembl.
OntologiesGO GO:0003062; P:regulation of heart rate by chemical signal; IEA:Ensembl.
OntologiesGO GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
OntologiesGO GO:0051591; P:response to cAMP; IEA:Ensembl.
OntologiesGO GO:0042493; P:response to drug; IEA:Ensembl.
OntologiesGO GO:0032094; P:response to food; IEA:Ensembl.
OntologiesGO GO:0033762; P:response to glucagon; IEA:Ensembl.
OntologiesGO GO:0009749; P:response to glucose; IEA:Ensembl.
OntologiesGO GO:0032570; P:response to progesterone; IEA:Ensembl.
OntologiesGO GO:0032526; P:response to retinoic acid; IEA:Ensembl.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
OntologiesGO GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
Proteomic databasesMaxQB P36956; -.
Proteomic databasesPaxDb P36956; -.
Proteomic databasesPRIDE P36956; -.
Family and domain databasesGene3D 4.10.280.10; -; 1.
Family and domain databasesInterPro IPR011598; bHLH_dom.
Family and domain databasesPfam PF00010; HLH; 1.
Family and domain databasesPROSITE PS50888; BHLH; 1.
Family and domain databasesSMART SM00353; HLH; 1.
Family and domain databasesSUPFAM SSF47459; SSF47459; 1.
PTM databasesPhosphoSite P36956; -.
Protein-protein interaction databasesBioGrid 112598; 55.
Protein-protein interaction databasesDIP DIP-331N; -.
Protein-protein interaction databasesIntAct P36956; 14.
Protein-protein interaction databasesMINT MINT-2803077; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000348069; -.
Enzyme and pathway databasesReactome REACT_116145; PPARA activates gene expression.
Enzyme and pathway databasesReactome REACT_118659; RORA activates circadian gene expression.
Enzyme and pathway databasesReactome REACT_147797; Regulation of cholesterol biosynthesis by SREBP (SREBF).
Enzyme and pathway databasesReactome REACT_147904; Activation of gene expression by SREBF (SREBP).
Enzyme and pathway databasesReactome REACT_27161; Transcriptional regulation of white adipocyte differentiation.
Enzyme and pathway databasesSignaLink P36956; -.
3D structure databasesPDB 1AM9; X-ray; 2.30 A; A/B/C/D=319-400.
3D structure databasesPDBsum 1AM9; -.
3D structure databasesProteinModelPortal P36956; -.
3D structure databasesSMR P36956; 319-400.
Phylogenomic databaseseggNOG NOG242942; -.
Phylogenomic databasesGeneTree ENSGT00390000017651; -.
Phylogenomic databasesHOVERGEN HBG061592; -.
Phylogenomic databasesInParanoid P36956; -.
Phylogenomic databasesKO K07197; -.
Phylogenomic databasesOMA FDPPYAG; -.
Phylogenomic databasesPhylomeDB P36956; -.
Phylogenomic databasesTreeFam TF313894; -.
Organism-specific databasesCTD 6720; -.
Organism-specific databasesGeneCards GC17M017714; -.
Organism-specific databasesHGNC HGNC:11289; SREBF1.
Organism-specific databasesHPA CAB005406; -.
Organism-specific databasesMIM 184756; gene.
Organism-specific databasesneXtProt NX_P36956; -.
Organism-specific databasesPharmGKB PA335; -.
OtherChiTaRS SREBF1; human.
OtherEvolutionaryTrace P36956; -.
OtherGeneWiki SREBF1; -.
OtherGenomeRNAi 6720; -.
OtherNextBio 26212; -.
OtherPMAP-CutDB P36956; -.
OtherPRO PR:P36956; -.



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