Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 6734
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000332118; ENSP00000328023; ENSG00000182934. [P08240-1]
Genome annotation databasesEnsembl ENST00000532259; ENSP00000435508; ENSG00000182934. [P08240-2]
Genome annotation databasesGeneID 6734; -.
Genome annotation databasesKEGG hsa:6734; -.
Genome annotation databasesUCSC uc001qdh.3; human. [P08240-1]
Sequence databasesCCDS CCDS31717.1; -. [P08240-1]
Sequence databasesCCDS CCDS53722.1; -. [P08240-2]
Sequence databasesEMBL X06272; CAA29608.1; -; mRNA.
Sequence databasesEMBL AK303379; BAG64435.1; -; mRNA.
Sequence databasesEMBL AK312377; BAG35295.1; -; mRNA.
Sequence databasesEMBL AP001318; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Sequence databasesEMBL CH471065; EAW67686.1; -; Genomic_DNA.
Sequence databasesEMBL BC001162; AAH01162.1; -; mRNA.
Sequence databasesEMBL BC009110; AAH09110.1; -; mRNA.
Sequence databasesEMBL BC013583; AAH13583.1; -; mRNA.
Sequence databasesPIR A29440; A29440.
Sequence databasesRefSeq NP_001171313.1; NM_001177842.1. [P08240-2]
Sequence databasesRefSeq NP_003130.2; NM_003139.3. [P08240-1]
Sequence databasesUniGene Hs.368376; -.
Polymorphism databasesDMDM 20455516; -.
Gene expression databasesBgee P08240; -.
Gene expression databasesCleanEx HS_SRPR; -.
Gene expression databasesGenevestigator P08240; -.
OntologiesGO GO:0005783; C:endoplasmic reticulum; TAS:ProtInc.
OntologiesGO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.
OntologiesGO GO:0070062; C:extracellular vesicular exosome; IDA:UniProt.
OntologiesGO GO:0016021; C:integral component of membrane; TAS:ProtInc.
OntologiesGO GO:0016020; C:membrane; IDA:MGI.
OntologiesGO GO:0005785; C:signal recognition particle receptor complex; TAS:ProtInc.
OntologiesGO GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
OntologiesGO GO:0003924; F:GTPase activity; IEA:InterPro.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0005047; F:signal recognition particle binding; TAS:ProtInc.
OntologiesGO GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.
OntologiesGO GO:0044267; P:cellular protein metabolic process; TAS:Reactome.
OntologiesGO GO:0006613; P:cotranslational protein targeting to membrane; TAS:ProtInc.
OntologiesGO GO:0030968; P:endoplasmic reticulum unfolded protein response; TAS:Reactome.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.
OntologiesGO GO:0006412; P:translation; TAS:Reactome.
Proteomic databasesMaxQB P08240; -.
Proteomic databasesPaxDb P08240; -.
Proteomic databasesPRIDE P08240; -.
Family and domain databasesGene3D 3.40.50.300; -; 1.
Family and domain databasesInterPro IPR003593; AAA+_ATPase.
Family and domain databasesInterPro IPR011012; Longin-like_dom.
Family and domain databasesInterPro IPR027417; P-loop_NTPase.
Family and domain databasesInterPro IPR007222; Sig_recog_particle_rcpt_asu_N.
Family and domain databasesInterPro IPR013822; Signal_recog_particl_SRP54_hlx.
Family and domain databasesInterPro IPR000897; SRP54_GTPase_dom.
Family and domain databasesPfam PF04086; SRP-alpha_N; 1.
Family and domain databasesPfam PF00448; SRP54; 1.
Family and domain databasesPfam PF02881; SRP54_N; 1.
Family and domain databasesPROSITE PS00300; SRP54; 1.
Family and domain databasesSMART SM00382; AAA; 1.
Family and domain databasesSMART SM00962; SRP54; 1.
Family and domain databasesSMART SM00963; SRP54_N; 1.
Family and domain databasesSUPFAM SSF47364; SSF47364; 1.
Family and domain databasesSUPFAM SSF52540; SSF52540; 1.
Family and domain databasesSUPFAM SSF64356; SSF64356; 1.
PTM databasesPhosphoSite P08240; -.
Protein-protein interaction databasesBioGrid 112612; 10.
Protein-protein interaction databasesIntAct P08240; 3.
Protein-protein interaction databasesMINT MINT-1404634; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000328023; -.
Enzyme and pathway databasesReactome REACT_115902; SRP-dependent cotranslational protein targeting to membrane.
Enzyme and pathway databasesReactome REACT_18273; XBP1(S) activates chaperone genes.
3D structure databasesPDB 2FH5; X-ray; 2.45 A; A=3-176.
3D structure databasesPDB 2GO5; EM; 7.40 A; 1=3-176.
3D structure databasesPDBsum 2FH5; -.
3D structure databasesPDBsum 2GO5; -.
3D structure databasesProteinModelPortal P08240; -.
3D structure databasesSMR P08240; 1-130, 333-624.
Protocols and materials databasesDNASU 6734; -.
Phylogenomic databaseseggNOG COG0552; -.
Phylogenomic databasesGeneTree ENSGT00550000074936; -.
Phylogenomic databasesHOGENOM HOG000201671; -.
Phylogenomic databasesHOVERGEN HBG047566; -.
Phylogenomic databasesInParanoid P08240; -.
Phylogenomic databasesKO K13431; -.
Phylogenomic databasesOMA RGMEKSN; -.
Phylogenomic databasesOrthoDB EOG73Z2ST; -.
Phylogenomic databasesPhylomeDB P08240; -.
Phylogenomic databasesTreeFam TF106189; -.
Organism-specific databasesCTD 6734; -.
Organism-specific databasesGeneCards GC11M126132; -.
Organism-specific databasesHGNC HGNC:11307; SRPR.
Organism-specific databasesHPA HPA053860; -.
Organism-specific databasesMIM 182180; gene.
Organism-specific databasesneXtProt NX_P08240; -.
Organism-specific databasesPharmGKB PA36131; -.
OtherChiTaRS SRPR; human.
OtherEvolutionaryTrace P08240; -.
OtherGenomeRNAi 6734; -.
OtherNextBio 26272; -.
OtherPRO PR:P08240; -.



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