Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 3842
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories. http://www.uniprot.org/help/cross_references_section
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000337273; ENSP00000336712; ENSG00000083312. [Q92973-1]
Genome annotation databasesEnsembl ENST00000506351; ENSP00000425118; ENSG00000083312. [Q92973-2]
Genome annotation databasesEnsembl ENST00000523768; ENSP00000428899; ENSG00000083312. [Q92973-3]
Genome annotation databasesGeneID 3842; -.
Genome annotation databasesKEGG hsa:3842; -.
Genome annotation databasesUCSC uc003kcg.4; human. [Q92973-1]
Genome annotation databasesUCSC uc011csj.1; human. [Q92973-3]
Sequence databasesCCDS CCDS4016.1; -. [Q92973-2]
Sequence databasesCCDS CCDS43329.1; -. [Q92973-1]
Sequence databasesEMBL U70322; AAC50723.1; ALT_INIT; mRNA.
Sequence databasesEMBL U72069; AAB58254.1; -; mRNA.
Sequence databasesEMBL U72395; AAB68948.1; -; mRNA.
Sequence databasesEMBL AK301021; BAG62638.1; -; mRNA.
Sequence databasesEMBL BC040340; AAH40340.1; ALT_INIT; mRNA.
Sequence databasesRefSeq NP_002261.3; NM_002270.3. [Q92973-1]
Sequence databasesRefSeq NP_694858.1; NM_153188.2. [Q92973-2]
Sequence databasesRefSeq XP_005248557.1; XM_005248500.1. [Q92973-2]
Sequence databasesUniGene Hs.482497; -.
Polymorphism databasesDMDM 259016171; -.
Gene expression databasesBgee Q92973; -.
Gene expression databasesCleanEx HS_TNPO1; -.
Gene expression databasesExpressionAtlas Q92973; baseline and differential.
Gene expression databasesGenevestigator Q92973; -.
OntologiesGO GO:0005737; C:cytoplasm; TAS:ProtInc.
OntologiesGO GO:0005829; C:cytosol; TAS:Reactome.
OntologiesGO GO:0005634; C:nucleus; TAS:ProtInc.
OntologiesGO GO:0008139; F:nuclear localization sequence binding; TAS:ProtInc.
OntologiesGO GO:0044822; F:poly(A) RNA binding; IDA:UniProtKB.
OntologiesGO GO:0010467; P:gene expression; TAS:Reactome.
OntologiesGO GO:0016071; P:mRNA metabolic process; TAS:Reactome.
OntologiesGO GO:0000060; P:protein import into nucleus, translocation; TAS:ProtInc.
OntologiesGO GO:0016070; P:RNA metabolic process; TAS:Reactome.
OntologiesGO GO:0016032; P:viral process; IEA:UniProtKB-KW.
Proteomic databasesMaxQB Q92973; -.
Proteomic databasesPaxDb Q92973; -.
Proteomic databasesPRIDE Q92973; -.
Family and domain databasesGene3D 1.25.10.10; -; 2.
Family and domain databasesInterPro IPR011989; ARM-like.
Family and domain databasesInterPro IPR016024; ARM-type_fold.
Family and domain databasesInterPro IPR001494; Importin-beta_N.
Family and domain databasesPfam PF03810; IBN_N; 1.
Family and domain databasesPROSITE PS50166; IMPORTIN_B_NT; 1.
Family and domain databasesSMART SM00913; IBN_N; 1.
Family and domain databasesSUPFAM SSF48371; SSF48371; 1.
PTM databasesPhosphoSite Q92973; -.
Protein-protein interaction databasesBioGrid 110040; 44.
Protein-protein interaction databasesDIP DIP-29335N; -.
Protein-protein interaction databasesIntAct Q92973; 18.
Protein-protein interaction databasesMINT MINT-94165; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000336712; -.
Enzyme and pathway databasesReactome REACT_25064; Tristetraprolin (TTP) destabilizes mRNA.
3D structure databasesPDB 1QBK; X-ray; 3.00 A; B=9-898.
3D structure databasesPDB 2H4M; X-ray; 3.05 A; A/B=376-898, A/B=9-343.
3D structure databasesPDB 2OT8; X-ray; 3.10 A; A/B=9-331, A/B=375-898.
3D structure databasesPDB 2QMR; X-ray; 3.00 A; A/B/C/D=9-898.
3D structure databasesPDB 2Z5J; X-ray; 3.40 A; A=9-898.
3D structure databasesPDB 2Z5K; X-ray; 2.60 A; A=9-898.
3D structure databasesPDB 2Z5M; X-ray; 3.00 A; A=9-898.
3D structure databasesPDB 2Z5N; X-ray; 3.20 A; A=9-898.
3D structure databasesPDB 2Z5O; X-ray; 3.20 A; A=9-898.
3D structure databasesPDB 4FDD; X-ray; 2.30 A; A=9-331, A=375-898.
3D structure databasesPDB 4FQ3; X-ray; 3.00 A; A=9-898.
3D structure databasesPDB 4JLQ; X-ray; 3.05 A; A=9-331, A=375-898.
3D structure databasesPDB 4OO6; X-ray; 2.70 A; A=375-898, A=9-331.
3D structure databasesPDBsum 1QBK; -.
3D structure databasesPDBsum 2H4M; -.
3D structure databasesPDBsum 2OT8; -.
3D structure databasesPDBsum 2QMR; -.
3D structure databasesPDBsum 2Z5J; -.
3D structure databasesPDBsum 2Z5K; -.
3D structure databasesPDBsum 2Z5M; -.
3D structure databasesPDBsum 2Z5N; -.
3D structure databasesPDBsum 2Z5O; -.
3D structure databasesPDBsum 4FDD; -.
3D structure databasesPDBsum 4FQ3; -.
3D structure databasesPDBsum 4JLQ; -.
3D structure databasesPDBsum 4OO6; -.
3D structure databasesProteinModelPortal Q92973; -.
3D structure databasesSMR Q92973; 11-897.
Protocols and materials databasesDNASU 3842; -.
Phylogenomic databaseseggNOG COG5215; -.
Phylogenomic databasesGeneTree ENSGT00550000074720; -.
Phylogenomic databasesHOGENOM HOG000203940; -.
Phylogenomic databasesHOVERGEN HBG058963; -.
Phylogenomic databasesInParanoid Q92973; -.
Phylogenomic databasesOMA EEDIKPR; -.
Phylogenomic databasesOrthoDB EOG7XM2X0; -.
Phylogenomic databasesPhylomeDB Q92973; -.
Phylogenomic databasesTreeFam TF300825; -.
Organism-specific databasesCTD 3842; -.
Organism-specific databasesGeneCards GC05P072148; -.
Organism-specific databasesHGNC HGNC:6401; TNPO1.
Organism-specific databasesHPA CAB016325; -.
Organism-specific databasesMIM 602901; gene.
Organism-specific databasesneXtProt NX_Q92973; -.
Organism-specific databasesPharmGKB PA30192; -.
OtherChiTaRS TNPO1; human.
OtherEvolutionaryTrace Q92973; -.
OtherGeneWiki Transportin_1; -.
OtherGenomeRNAi 3842; -.
OtherNextBio 15119; -.
OtherPRO PR:Q92973; -.



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