Cancer Cell Metabolism Gene Database

  Cancer Cell Metabolism Gene DB






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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
Cross referenced IDs for 1462
* We obtained these cross-references from Uniprot database. It covers 150 different DBs, 18 categories.
DB CategoryDB NameDB's ID and Url link
Genome annotation databasesEnsembl ENST00000265077; ENSP00000265077; ENSG00000038427. [P13611-1]
Genome annotation databasesEnsembl ENST00000342785; ENSP00000342768; ENSG00000038427. [P13611-3]
Genome annotation databasesEnsembl ENST00000343200; ENSP00000340062; ENSG00000038427. [P13611-2]
Genome annotation databasesEnsembl ENST00000502527; ENSP00000421362; ENSG00000038427. [P13611-4]
Genome annotation databasesGeneID 1462; -.
Genome annotation databasesKEGG hsa:1462; -.
Genome annotation databasesUCSC uc003kii.3; human. [P13611-1]
Genome annotation databasesUCSC uc003kij.3; human. [P13611-2]
Genome annotation databasesUCSC uc003kik.3; human. [P13611-4]
Genome annotation databasesUCSC uc010jau.2; human. [P13611-3]
Sequence databasesCCDS CCDS4060.1; -. [P13611-1]
Sequence databasesCCDS CCDS47242.1; -. [P13611-4]
Sequence databasesCCDS CCDS54875.1; -. [P13611-3]
Sequence databasesCCDS CCDS54876.1; -. [P13611-2]
Sequence databasesEMBL X15998; CAA34128.1; -; mRNA.
Sequence databasesEMBL U16306; AAA65018.1; -; mRNA.
Sequence databasesEMBL U26555; AAA67565.1; -; mRNA.
Sequence databasesEMBL D32039; BAA06801.1; -; mRNA.
Sequence databasesEMBL S52488; AAB24878.1; -; Genomic_DNA.
Sequence databasesEMBL J02814; AAA36437.1; -; mRNA.
Sequence databasesEMBL AF084545; AAD48545.1; -; mRNA.
Sequence databasesPIR S06014; A60979.
Sequence databasesRefSeq NP_001119808.1; NM_001126336.2. [P13611-4]
Sequence databasesRefSeq NP_001157569.1; NM_001164097.1. [P13611-2]
Sequence databasesRefSeq NP_001157570.1; NM_001164098.1. [P13611-3]
Sequence databasesRefSeq NP_004376.2; NM_004385.4. [P13611-1]
Sequence databasesUniGene Hs.643801; -.
Polymorphism databasesDMDM 2506816; -.
Gene expression databasesBgee P13611; -.
Gene expression databasesCleanEx HS_VCAN; -.
Gene expression databasesExpressionAtlas P13611; baseline and differential.
Gene expression databasesGenevestigator P13611; -.
OntologiesGO GO:0031012; C:extracellular matrix; IDA:UniProtKB.
OntologiesGO GO:0005576; C:extracellular region; TAS:Reactome.
OntologiesGO GO:0005615; C:extracellular space; IDA:BHF-UCL.
OntologiesGO GO:0005796; C:Golgi lumen; TAS:Reactome.
OntologiesGO GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
OntologiesGO GO:0043202; C:lysosomal lumen; TAS:Reactome.
OntologiesGO GO:0016020; C:membrane; IDA:UniProt.
OntologiesGO GO:0005578; C:proteinaceous extracellular matrix; TAS:ProtInc.
OntologiesGO GO:0005509; F:calcium ion binding; IEA:InterPro.
OntologiesGO GO:0030246; F:carbohydrate binding; IEA:UniProtKB-KW.
OntologiesGO GO:0005539; F:glycosaminoglycan binding; TAS:ProtInc.
OntologiesGO GO:0005540; F:hyaluronic acid binding; TAS:ProtInc.
OntologiesGO GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.
OntologiesGO GO:0007155; P:cell adhesion; TAS:ProtInc.
OntologiesGO GO:0008037; P:cell recognition; TAS:ProtInc.
OntologiesGO GO:0030206; P:chondroitin sulfate biosynthetic process; TAS:Reactome.
OntologiesGO GO:0030207; P:chondroitin sulfate catabolic process; TAS:Reactome.
OntologiesGO GO:0030204; P:chondroitin sulfate metabolic process; TAS:Reactome.
OntologiesGO GO:0030208; P:dermatan sulfate biosynthetic process; TAS:Reactome.
OntologiesGO GO:0030198; P:extracellular matrix organization; TAS:Reactome.
OntologiesGO GO:0008347; P:glial cell migration; IDA:BHF-UCL.
OntologiesGO GO:0030203; P:glycosaminoglycan metabolic process; TAS:Reactome.
OntologiesGO GO:0007507; P:heart development; IEA:Ensembl.
OntologiesGO GO:0007275; P:multicellular organismal development; TAS:ProtInc.
OntologiesGO GO:0001649; P:osteoblast differentiation; IDA:UniProt.
OntologiesGO GO:0044281; P:small molecule metabolic process; TAS:Reactome.
Proteomic databasesMaxQB P13611; -.
Proteomic databasesPaxDb P13611; -.
Proteomic databasesPRIDE P13611; -.
Family and domain databasesGene3D; -; 1.
Family and domain databasesGene3D; -; 3.
Family and domain databasesInterPro IPR001304; C-type_lectin.
Family and domain databasesInterPro IPR016186; C-type_lectin-like.
Family and domain databasesInterPro IPR018378; C-type_lectin_CS.
Family and domain databasesInterPro IPR016187; C-type_lectin_fold.
Family and domain databasesInterPro IPR000742; EG-like_dom.
Family and domain databasesInterPro IPR001881; EGF-like_Ca-bd_dom.
Family and domain databasesInterPro IPR013032; EGF-like_CS.
Family and domain databasesInterPro IPR000152; EGF-type_Asp/Asn_hydroxyl_site.
Family and domain databasesInterPro IPR018097; EGF_Ca-bd_CS.
Family and domain databasesInterPro IPR007110; Ig-like_dom.
Family and domain databasesInterPro IPR013783; Ig-like_fold.
Family and domain databasesInterPro IPR003599; Ig_sub.
Family and domain databasesInterPro IPR013106; Ig_V-set.
Family and domain databasesInterPro IPR000538; Link.
Family and domain databasesInterPro IPR000436; Sushi_SCR_CCP.
Family and domain databasesPfam PF00008; EGF; 2.
Family and domain databasesPfam PF00059; Lectin_C; 1.
Family and domain databasesPfam PF00084; Sushi; 1.
Family and domain databasesPfam PF07686; V-set; 1.
Family and domain databasesPfam PF00193; Xlink; 2.
Family and domain databasesPRINTS PR01265; LINKMODULE.
Family and domain databasesPROSITE PS00010; ASX_HYDROXYL; 1.
Family and domain databasesPROSITE PS00615; C_TYPE_LECTIN_1; 1.
Family and domain databasesPROSITE PS50041; C_TYPE_LECTIN_2; 1.
Family and domain databasesPROSITE PS00022; EGF_1; 2.
Family and domain databasesPROSITE PS01186; EGF_2; 1.
Family and domain databasesPROSITE PS50026; EGF_3; 2.
Family and domain databasesPROSITE PS01187; EGF_CA; 1.
Family and domain databasesPROSITE PS50835; IG_LIKE; 1.
Family and domain databasesPROSITE PS01241; LINK_1; 2.
Family and domain databasesPROSITE PS50963; LINK_2; 2.
Family and domain databasesPROSITE PS50923; SUSHI; 1.
Family and domain databasesSMART SM00032; CCP; 1.
Family and domain databasesSMART SM00034; CLECT; 1.
Family and domain databasesSMART SM00181; EGF; 1.
Family and domain databasesSMART SM00179; EGF_CA; 1.
Family and domain databasesSMART SM00409; IG; 1.
Family and domain databasesSMART SM00445; LINK; 2.
Family and domain databasesSUPFAM SSF56436; SSF56436; 3.
Family and domain databasesSUPFAM SSF57535; SSF57535; 1.
PTM databasesPhosphoSite P13611; -.
Protein-protein interaction databasesBioGrid 107844; 18.
Protein-protein interaction databasesIntAct P13611; 5.
Protein-protein interaction databasesMINT MINT-4529155; -.
Protein-protein interaction databasesSTRING 9606.ENSP00000265077; -.
Enzyme and pathway databasesReactome REACT_120800; Dermatan sulfate biosynthesis.
Enzyme and pathway databasesReactome REACT_120888; CS/DS degradation.
Enzyme and pathway databasesReactome REACT_120989; Chondroitin sulfate biosynthesis.
Enzyme and pathway databasesReactome REACT_121408; A tetrasaccharide linker sequence is required for GAG synthesis.
Enzyme and pathway databasesReactome REACT_163906; ECM proteoglycans.
Enzyme and pathway databasesReactome REACT_267642; Defective CHST14 causes EDS, musculocontractural type.
Enzyme and pathway databasesReactome REACT_267659; Defective B3GAT3 causes JDSSDHD.
Enzyme and pathway databasesReactome REACT_267682; Defective CHSY1 causes TPBS.
Enzyme and pathway databasesReactome REACT_267708; Defective CHST3 causes SEDCJD.
Enzyme and pathway databasesReactome REACT_267711; Defective B4GALT7 causes EDS, progeroid type.
3D structure databasesProteinModelPortal P13611; -.
3D structure databasesSMR P13611; 23-149, 151-247, 260-348, 3047-3333.
Protocols and materials databasesDNASU 1462; -.
Phylogenomic databaseseggNOG NOG12793; -.
Phylogenomic databasesGeneTree ENSGT00760000119025; -.
Phylogenomic databasesHOVERGEN HBG051140; -.
Phylogenomic databasesInParanoid P13611; -.
Phylogenomic databasesKO K06793; -.
Phylogenomic databasesOMA TQEEFPW; -.
Phylogenomic databasesOrthoDB EOG7J70DP; -.
Phylogenomic databasesPhylomeDB P13611; -.
Phylogenomic databasesTreeFam TF332134; -.
Organism-specific databasesCTD 1462; -.
Organism-specific databasesGeneCards GC05P082804; -.
Organism-specific databasesGeneReviews VCAN; -.
Organism-specific databasesHGNC HGNC:2464; VCAN.
Organism-specific databasesHPA CAB008979; -.
Organism-specific databasesHPA HPA004726; -.
Organism-specific databasesMIM 118661; gene.
Organism-specific databasesMIM 143200; phenotype.
Organism-specific databasesneXtProt NX_P13611; -.
Organism-specific databasesOrphanet 898; Wagner disease.
Organism-specific databasesPharmGKB PA162408788; -.
ChemistryDrugBank DB08818; Hyaluronan.
OtherChiTaRS VCAN; human.
OtherGeneWiki Versican; -.
OtherGenomeRNAi 1462; -.
OtherNextBio 6005; -.
OtherPMAP-CutDB P13611; -.
OtherPRO PR:P13611; -.

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