Cancer Cell Metabolism Gene Database

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Bioinformatics and Systems Medicine Laboratory Bioinformatics and Systems Medicine Laboratory
check002.gifGene-Gene Network
* Using all Interacting genes, we can get KEGG pathway information from DAVID.

check002.gifInteracting Genes (from Pathway Commons)
Target GenesDBsRelations
DatabaseofInteractingProteinsinteracts-withCREBBP,FBXL3,PER1,SKP1,
neighbor-ofCREBBP,FBXL3,PER1,SKP1,
NCIPathwayInteractionDatabaseneighbor-ofBHLHE40,CLOCK,CRY1,CRY2,
DEC1,NPAS2,NR1D1,PER1,
PER2,TIMELESS,
in-complex-withCLOCK,DEC1,NPAS2,
controls-expression-ofCRY1,CRY2,NR1D1,PER1,
PER2,TIMELESS,
PANTHERPathwayin-complex-withCLOCK,
neighbor-ofCLOCK,CRY1,CRY2,CSNK1D,
CSNK1E,PER1,PER2,PER3,
BioGRIDinteracts-withCLOCK,CRY1,CSNK1E,DYRK1B,
EP300,EPAS1,HIF1A,HSP90AA1,
KAT2B,NPAS2,NPAS4,RARA,
RXRA,SIRT1,SUMO2,SUMO3,
UBC,UBE3A,
neighbor-ofCLOCK,CRY1,CSNK1E,DYRK1B,
EP300,EPAS1,HIF1A,HSP90AA1,
KAT2B,NPAS2,NPAS4,RARA,
RXRA,SIRT1,SUMO2,SUMO3,
UBC,UBE3A,
HPRDinteracts-withBHLHE40,CLOCK,CRY1,CSNK1E,
EPAS1,HIF1A,HLF,HSP90AA1,
NPAS2,NPAS4,PER3,UBE2I,
neighbor-ofBHLHE40,CLOCK,CRY1,CSNK1E,
EPAS1,HIF1A,HLF,HSP90AA1,
NPAS2,NPAS4,PER3,UBE2I,
IntActinteracts-withATAD3B,CCNA2,CDKN2A,CLOCK,
CREBBP,CTBP2,DCAF7,DDB1,
DYNLL1,DYRK1B,ENAH,EP300,
EP400,EPAS1,FAM117A,FAM117B,
FAM53C,FOXK1,GLCCI1,KAT8,
KIAA0232,KIAA0947,LZTS2,MSL3,
NARG2,PPP1R3F,PRKACA,PRKAR1A,
PTGES3,RB1,RBL1,RBL2,
RNF169,SIPA1L1,SIPA1L2,SIPA1L3,
SKI,TECR,TROAP,USP11,
WDR6,ZNF516,
neighbor-ofATAD3B,CCNA2,CDKN2A,CLOCK,
CREBBP,CTBP2,DCAF7,DDB1,
DYNLL1,DYRK1B,ENAH,EP300,
EP400,EPAS1,FAM117A,FAM117B,
FAM53C,FOXK1,GLCCI1,KAT8,
KIAA0232,KIAA0947,LZTS2,MSL3,
NARG2,PPP1R3F,PRKACA,PRKAR1A,
PTGES3,RB1,RBL1,RBL2,
RNF169,SIPA1L1,SIPA1L2,SIPA1L3,
SKI,TECR,TROAP,USP11,
WDR6,ZNF516,
PhosphoSitePlusneighbor-ofGSK3B,
Reactomeneighbor-ofARNTL2,AVP,BHLHE40,BHLHE41,
CARM1,CCRN4L,CHD9,CLOCK,
CREBBP,CRY1,CRY2,CSNK1D,
CSNK1E,DBP,EP300,F7,
HDAC3,HELZ2,MED1,NAMPT,
NCOA1,NCOA2,NCOA6,NCOR1,
NPAS2,NR1D1,NR3C1,PER1,
PER2,PPARA,PPARGC1A,RORA,
RXRA,SERPINE1,SMARCD3,TBL1XR1,
TBL1X,TGS1,
controls-expression-ofAVP,BHLHE40,BHLHE41,CCRN4L,
CRY1,DBP,F7,NAMPT,
NR1D1,PER1,PER2,PPARA,
SERPINE1,
in-complex-withCLOCK,CRY1,CRY2,CSNK1D,
CSNK1E,NPAS2,PER1,PER2,



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