Cancer Cell Metabolism Database ~~ Bioinformatics and Systems Medicine Laboratory ~~

Cancer Cell Metabolism Gene Database

Cancer Cell Metabolism Gene DB

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Gene-Gene Network

* Using all Interacting genes, we can get KEGG pathway information from DAVID.

Interacting Genes (from Pathway Commons)

Target Genes	DBs	Relations
BIND	interacts-with	POLR2A,RBL2,TAF1,
BIND	neighbor-of	POLR2A,RBL2,TAF1,
DatabaseofInteractingProteins	interacts-with	PCCB,
DatabaseofInteractingProteins	neighbor-of	PCCB,
PANTHERPathway	catalysis-precedes	MCEE,
BioGRID	interacts-with	UBC,UBE2N,
BioGRID	neighbor-of	UBC,UBE2N,
HPRD	interacts-with	PCCB,
HPRD	neighbor-of	PCCB,
HumanCyc	catalysis-precedes	ECHDC1,MCEE,
	in-complex-with	PCCB,
	neighbor-of	PCCB,
IntAct	interacts-with	PCCB,PCMT1,PHB2,POTEE, POTEF,PPIA,PPP2CA,PPP2CB, PPP2R1A,PPP2R1B,PPP2R2B,PPP4C, PRDX1,PRDX3,PRDX4,PRPF40A, PRPF8,PRSS1,PSD4,PSMB6, PSMC2,PSMD2,PTBP1,QARS, R3HCC1,RAD50,RAN,RBM25, RBM7,RCN1,RCN2,RECQL4, RFC3,RPL10A,RPL10,RPL11, RPL12,RPL13AP3,RPL13A,RPL13, RPL14,RPL15,RPL17,RPL18A, RPL18,RPL19,RPL21,RPL22, RPL23A,RPL23,RPL24,RPL26L1, RPL26,RPL27A,RPL27,RPL28, RPL30,RPL31,RPL32,RPL34, RPL35A,RPL35,RPL36AL,RPL36A, RPL36,RPL37A,RPL3,RPL4, RPL5,RPL6,RPL7A,RPL7, RPL8,RPL9P9,RPLP0,RPLP1, RPLP2,RPS10,RPS11,RPS12, RPS13,RPS14,RPS15A,RPS16, RPS17,RPS18,RPS19,RPS20, RPS23,RPS24,RPS26,RPS27L, RPS2,RPS3A,RPS3,RPS4X, RPS5,RPS6,RPS7,RPS8, RPS9,RPSA,RSL1D1,RUVBL1, RUVBL2,S100A7,S100A8,S100A9, SEC13,SEC16A,SERBP1,SERTAD4, SET,SF3B1,SF3B2,SFPQ, SGOL2,SIK2,SKA1,SKA2, SKA3,SKIV2L2,SLC25A6,SMC4, SNRNP200,SNRNP70,SNRPA1,SNRPA, SNRPB2,SNRPB,SNRPC,SNRPD1, SNRPD2,SNRPD3,SNRPE,SNRPF, SRP9,SRSF1,SRSF4,SRSF5, SRSF6,SSBP1,STAU1,SUGP2, SYNCRIP,TCP1,TIMM50,TMPO, TOE1,TRIM28,TUBA1A,TUBA1B, TUBA1C,TUBB4B,TUBB,TUFM, UBR5,VIM,WDR77,XPOT, XRCC5,YBX1,YBX3,YWHAE, ZC3HAV1,ZCCHC8,
IntAct	neighbor-of	PCCB,PCMT1,PHB2,POTEE, POTEF,PPIA,PPP2CA,PPP2CB, PPP2R1A,PPP2R1B,PPP2R2B,PPP4C, PRDX1,PRDX3,PRDX4,PRPF40A, PRPF8,PRSS1,PSD4,PSMB6, PSMC2,PSMD2,PTBP1,QARS, R3HCC1,RAD50,RAN,RBM25, RBM7,RCN1,RCN2,RECQL4, RFC3,RPL10A,RPL10,RPL11, RPL12,RPL13AP3,RPL13A,RPL13, RPL14,RPL15,RPL17,RPL18A, RPL18,RPL19,RPL21,RPL22, RPL23A,RPL23,RPL24,RPL26L1, RPL26,RPL27A,RPL27,RPL28, RPL30,RPL31,RPL32,RPL34, RPL35A,RPL35,RPL36AL,RPL36A, RPL36,RPL37A,RPL3,RPL4, RPL5,RPL6,RPL7A,RPL7, RPL8,RPL9P9,RPLP0,RPLP1, RPLP2,RPS10,RPS11,RPS12, RPS13,RPS14,RPS15A,RPS16, RPS17,RPS18,RPS19,RPS20, RPS23,RPS24,RPS26,RPS27L, RPS2,RPS3A,RPS3,RPS4X, RPS5,RPS6,RPS7,RPS8, RPS9,RPSA,RSL1D1,RUVBL1, RUVBL2,S100A7,S100A8,S100A9, SEC13,SEC16A,SERBP1,SERTAD4, SET,SF3B1,SF3B2,SFPQ, SGOL2,SIK2,SKA1,SKA2, SKA3,SKIV2L2,SLC25A6,SMC4, SNRNP200,SNRNP70,SNRPA1,SNRPA, SNRPB2,SNRPB,SNRPC,SNRPD1, SNRPD2,SNRPD3,SNRPE,SNRPF, SRP9,SRSF1,SRSF4,SRSF5, SRSF6,SSBP1,STAU1,SUGP2, SYNCRIP,TCP1,TIMM50,TMPO, TOE1,TRIM28,TUBA1A,TUBA1B, TUBA1C,TUBB4B,TUBB,TUFM, UBR5,VIM,WDR77,XPOT, XRCC5,YBX1,YBX3,YWHAE, ZC3HAV1,ZCCHC8,
Reactome	catalysis-precedes	MCEE,
	in-complex-with	PCCB,
	neighbor-of	PCCB,

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