DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
TMEM52
UniProt ID:
Q8NDY8
Entrez ID:
339456
Protein name:
Transmembrane protein 52
External links:
UniprotKB
HGNC
RefSeq
COSMIC
Please click
HERE
for better display.
Functional annotation
Mutations
Degrons
Degron mutations
Network-rewiring
Drug response
Drug resistance
...
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GO - Biological processes (BP):
...
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GO - Molecular function (MF):
...
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GO - Cellular component (CC):
integral component of membrane [GO:0016021]...
integral component of membrane [GO:0016021]
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Choose a PDB ID:
Open in full screen with detailed sequence annotations
TMEM52
D
M
A
R
G
P
L
A
A
R
G
L
R
L
L
L
P
L
L
P
L
L
P
L
L
P
L
P
Q
V
A
L
G
F
A
D
G
S
C
D
P
S
D
Q
C
P
P
Q
A
R
W
S
S
L
W
H
V
G
L
I
L
L
A
V
L
L
L
L
L
C
G
V
T
A
G
C
V
R
F
C
C
L
R
K
Q
A
Q
A
Q
P
H
L
P
P
A
R
Q
P
C
D
V
A
V
I
P
M
D
S
D
S
P
V
H
S
T
V
T
S
Y
S
S
V
Q
Y
P
L
G
M
R
L
P
L
P
F
G
E
L
D
L
D
S
M
A
P
P
A
Y
S
L
Y
T
P
E
P
P
P
S
Y
D
E
A
V
K
M
A
K
P
R
E
E
G
P
A
L
S
Q
K
P
S
P
L
L
G
A
S
G
L
E
T
T
P
V
P
Q
E
S
G
P
N
T
Q
L
P
P
C
S
P
G
A
P
20
40
60
80
100
120
140
160
180
200
Residue number
0
0.5
1
1.5
2
2.5
3
3.5
4
Number of mutated samples
0
0.5
1
1.5
2
2.5
3
Phosphorylation sites
Control panel
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ICGC
COSMIC
CCLE
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Phosphorylation
Legend: PTM sites
Phosphorylation
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AAchange
Cancer
Sample
Mutation type
Dataset
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entries
Search:
Degron hit
Class
E3 ligase
Source protein
Location
Detail
PPSY
ITCH
ITCH,NEDD4
Transmembrane protein 52
154:157
More..
Showing 1 to 1 of 1 entries
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Mutation
Sample
Cancer
Degron hit
Class
Location
Dataset
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entries
Search:
Mutation
Sample
Cancer
Dataset
Degron hit
Class
Location
Type
Impact score
p.D158N
TCGA-EE-A2MC
SKCM
TCGA
PPSY
ITCH
154:157
Mutation rewiring degron network
0.3056
p.D158N
SIDM00192
Colorectal Carcinoma
GDSC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.3056
p.K162N
TCGA-EK-A2R8
CESC
TCGA
PPSY
ITCH
154:157
Mutation substituting flanking lysine
0.3056
p.P162A
DO223671
LGG
ICGC
PPSY
ITCH
154:157
Mutation substituting flanking lysine
0.3056
p.P153T
SIDM00834
Colorectal Carcinoma
GDSC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.3056
p.P153T
ACH-000470
Colon/Colorectal Cancer
CCLE
PPSY
ITCH
154:157
Mutation rewiring degron network
0.3056
p.P153T
SW1463
large intestine
COSMIC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.3056
p.L158F
COLO-678
large intestine
COSMIC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.3056
p.E159K
TCGA-DA-A3F8
SKCM
TCGA
PPSY
ITCH
154:157
Mutation rewiring degron network
0.2778
p.R152I
DO230323
COCA
ICGC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.2778
p.P151Q
TCGA-AX-A2HD
UCEC
TCGA
PPSY
ITCH
154:157
Mutation rewiring degron network
0.25
p.P151L
SIDM01526
Mesothelioma
GDSC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.25
p.V161G
TCGA-F5-6814
READ
TCGA
PPSY
ITCH
154:157
Mutation rewiring degron network
0.2222
p.K147N
DO51599
CESC
ICGC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.1389
p.V146G
DO36556
READ
ICGC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.1111
p.A145D
DO228948
LICA
ICGC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.0833
p.A145D
DO229034
LICA
ICGC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.0833
p.E144K
DO37418
SKCM
ICGC
PPSY
ITCH
154:157
Mutation rewiring degron network
0.0556
Showing 1 to 18 of 18 entries
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Cell ID
Cell name
Cancer
Drug
IC50(uM)
Dataset
Protein
Degron
Cancer code
Cancer type
Drug
AVG_IC50(uM)(mutated)
AVG_IC50(uM)(Non-mutated)
Details
Kaplan plot for TMEM52 in
Select cancer type:
Download patient class data (Lower:Upper = 50%:50%)
*NOTE: the Kaplan plots were collected from
OncoLnc