Search by cell
In
Cell View, scRNASeqDB provides summary of cell group, sample information in cell group and top 200 up-regulated genes in cell group, as well as
interactive correlation matrix.
By selecting
By Cell menu item, users can query a cell group by inputing the name of cell group or select from the cell group list.
The detailed information can be obtained by clicking the name of cell group.
![](/scrnaseqdb/images/helpnew/fig9.jpg)
Figure 9. Cell group search interface.
![](/scrnaseqdb/images/helpnew/fig10.jpg)
Figure 10. Overall design and summary of the cell group.
![](/scrnaseqdb/images/helpnew/fig11.jpg)
Figure 11. The table provides sample information in the cell group.
![](/scrnaseqdb/images/helpnew/fig12.jpg)
Figure 12. The table provides top 200 up-regulated genes in the specific cell group.
R/qtlcharts was used to provide interactive data visualizations for gene correlation analysis.
![](/scrnaseqdb/images/helpnew/fig13.jpg)
Figure 13. The left panel is an image of a correlation matrix for 200 up-regulated genes in a specific cell group.
Hover over pixels in the correlation matrix on the left to see the values; click to see the corresponding scatterplot on the right.