ERGR - Ethanol-Related Gene Resource

Gene Information

Gene ID:

Symbol:

CANX

Full Name:

calnexin

Alias:

CNX|FLJ26570|IP90|P90

Organism:

Homo sapiens (Human)

Chromosome:

Genetic Location:

5q35

Physical Location:

179058535-179091247 on NC_000005.8

Gene Type:

protein-coding

Orthologs:

This gene has Mouse: 12330 Rat: 29144 ortholog(s) in other dataset(s).

Gene in Ethanol Study Datasets

Gene Information

Dataset Information

Name:		12774316
Method:		Microarray
Tissue:		Temporal cortex
Phenotype:		Alcohol dependence (AD)/Alcohol abuse/Alcoholism
Publication:		Sokolov et al. J Neurosci Res. (2003) Transcription profiling reveals mitochondrial, ubiquitin and signaling systems abnormalities in postmortem brains from subjects with a history of alcohol abuse or dependence. PubMed
Summary:		To identify candidate mechanisms for alcohol abuse, the expression of 12,626 genes was measured in postmortem temporal cortex from 11 subjects with a history of alcohol abuse or dependence, with or without other psychiatric diagnoses and compared pairwise with the expression in 11 nonalcoholic subjects matched for the other psychiatric diagnoses and demographics. Genes were defined to have altered expression in alcohol abuse if: 1) the gene showed decreased expression in at least 10 of 11 subjects with alcohol abuse, or showed increased expression in at least 10 of 11 subjects with this diagnosis compared to matched non-abusers (P<0.007, X2test); or 2) the difference in the mean abuser/non-abuser ratio for the gene from value of 1.0 was significant at P<0.05 (one sample t-test). In subjects with a history of alcohol abuse or dependence, 163 genes were changed significantly.

Gene Refseq Sequence Annotation

Gene Ontology (GO) Annotation

GO ID	GO Term	Category	Evidence (PubMed)
GO:0005789	endoplasmic reticulum membrane	Cellular Component	IEA
GO:0042470	melanosome	Cellular Component	IEA
GO:0016021	integral to membrane	Cellular Component	IEA
GO:0005737	cytoplasm	Cellular Component	IDA (15467828)
GO:0005783	endoplasmic reticulum	Cellular Component	IDA (14966132\|15467828)
GO:0005783	endoplasmic reticulum	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0051082	unfolded protein binding	Molecular Function	IEA
GO:0051082	unfolded protein binding	Molecular Function	NAS
GO:0005529	sugar binding	Molecular Function	IEA
GO:0005509	calcium ion binding	Molecular Function	TAS (8136357)
GO:0005509	calcium ion binding	Molecular Function	IEA
GO:0006457	protein folding	Biological Process	IEA
GO:0009306	protein secretion	Biological Process	TAS (8055875)
GO:0001525	angiogenesis	Biological Process	IDA (15467828)