Pulmonary Arterial Hypertension KnowledgeBase (PAHKB)
PAHKB
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

386724

Name

AMIGO3

Synonym

AMIGO-3;adhesion molecule with Ig-like domain 3;AMIGO3;adhesion molecule with Ig-like domain 3

Definition

alivin-3|amphoterin-induced gene and ORF 3|amphoterin-induced protein 3

Position

3p21

Gene Type

protein-coding

PAH Type

Description

PAH

"We observed linkage evidence in four regions: 3q22 ([median log of the odds (LOD) = 3.43]), 3p12 (median LOD) = 2.35), 2p22 (median LOD = 2.21), and 13q21 (median LOD = 2.09). When used in conjunction with the non-parametric bootstrap, our approach yields high-resolution to identify candidate gene regions containing putative BMPR2-interacting genes. Imputation of the disease model by LOD-score maximization indicates that the 3q22 locus alone predicts most FPAH cases in BMPR2 mutation carriers, providing strong evidence that BMPR2 and the 3q22 locus interact epistatically."
More detail of all Human literatures about AMIGO3

External Links

Links to Entrez Gene

386724

Links to all GeneRIF Items

386724

Links to iHOP

386724

Sequence Information

Nucleotide Sequence

>386724 : length: 1515
atgacctggttggtgctgctggggacactgctctgcatgctgcgcgttgggttaggcacc
ccggactccgagggtttcccgccccgtgcgctccacaactgcccctacaaatgtatctgc
gctgccgacctgctaagctgcactggcctagggctgcaggacgtgccagccgagttacct
gccgctactgcggacctcgacctgagccacaacgcgctccagcgcctgcgccccggctgg
ttggcgcccctcttccagctgcgcgccctgcacctagaccacaacgaactagatgcgctg
ggtcgcggcgtcttcgtcaacgccagcggcctgaggctgctcgatctatcatctaacacg
ttgcgggcgcttggccgccacgacctcgacgggctgggggcgctggagaagctgcttctg
ttcaataaccgcttggtgcacttggacgagcatgccttccacggcctgcgcgcgctcagc
catctctacctgggctgcaacgaactcgcctcgttctccttcgaccacctgcacggtctg
agcgccacccacctgcttactctggacctctcctccaaccggctgggacacatctccgta
cctgagctggccgcgctgccggccttcctcaagaacggcctctacttgcacaacaaccct
ttgccttgcgactgccgcctctaccacctgctacagcgctggcaccagcggggcctgagc
gccgtgcgcgactttgcgcgcgagtacgtatgcttggccttcaaggtacccgcgtcccgc
gtgcgcttcttccagcacagccgcgtctttgagaactgctcgtcggccccagctcttggc
ctagagcggccggaagagcacctgtacgcgctggtgggtcggtccctgaggctttactgc
aacaccagcgtcccggccatgcgcattgcctgggtttcgccgcagcaggagcttctcagg
gcgccaggatcccgcgatggcagcatcgcggtgctggccgacggcagcttggccataggc
aacgtacaggagcagcatgcgggactcttcgtgtgcctggccactgggccccgcctgcac
cacaaccagacgcacgagtacaacgtgagcgtgcactttccgcgcccagagcccgaggct
ttcaacacaggcttcaccacactgctgggctgtgccgtgggccttgtgctcgtgctgctc
tacctgttcgccccaccctgccgctgctgccgccgtgcctgccgctgccgccgctggccc
caaacacccagcccgctccaagagctgagcgcacagtcctcagtactcagcaccacaccg
ccagacgcacccagccgcaaggccagcgtccacaagcacgtagtctttctggagccaggc
cggaggggcctcaatggccgcgtgcagctggcagtagctgaggaattcgatctctacaac
cctggaggcctgcagctgaaggctggctctgagtccgccagctccataggctccgagggt
cccatgacaacctag

Protein Sequence

>386724 : length: 504
MTWLVLLGTLLCMLRVGLGTPDSEGFPPRALHNCPYKCICAADLLSCTGLGLQDVPAELP
AATADLDLSHNALQRLRPGWLAPLFQLRALHLDHNELDALGRGVFVNASGLRLLDLSSNT
LRALGRHDLDGLGALEKLLLFNNRLVHLDEHAFHGLRALSHLYLGCNELASFSFDHLHGL
SATHLLTLDLSSNRLGHISVPELAALPAFLKNGLYLHNNPLPCDCRLYHLLQRWHQRGLS
AVRDFAREYVCLAFKVPASRVRFFQHSRVFENCSSAPALGLERPEEHLYALVGRSLRLYC
NTSVPAMRIAWVSPQQELLRAPGSRDGSIAVLADGSLAIGNVQEQHAGLFVCLATGPRLH
HNQTHEYNVSVHFPRPEPEAFNTGFTTLLGCAVGLVLVLLYLFAPPCRCCRRACRCRRWP
QTPSPLQELSAQSSVLSTTPPDAPSRKASVHKHVVFLEPGRRGLNGRVQLAVAEEFDLYN
PGGLQLKAGSESASSIGSEGPMTT



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