Pulmonary Arterial Hypertension KnowledgeBase (PAHKB)
PAHKB
Pulmonary Arterial Hypertension KnowledgeBase
General information | Literature | Expression | Regulation | Variant | Interaction

Basic Information

Gene ID

57060

Name

PCBP4

Synonym

CBP|LIP4|MCG10;poly(rC) binding protein 4;PCBP4;poly(rC) binding protein 4

Definition

LYST-interacting protein|RNA binding protein MCG10|alpha-CP4|poly(rC)-binding protein 4

Position

3p21

Gene Type

protein-coding

PAH Type

Description

PAH

"We observed linkage evidence in four regions: 3q22 ([median log of the odds (LOD) = 3.43]), 3p12 (median LOD) = 2.35), 2p22 (median LOD = 2.21), and 13q21 (median LOD = 2.09). When used in conjunction with the non-parametric bootstrap, our approach yields high-resolution to identify candidate gene regions containing putative BMPR2-interacting genes. Imputation of the disease model by LOD-score maximization indicates that the 3q22 locus alone predicts most FPAH cases in BMPR2 mutation carriers, providing strong evidence that BMPR2 and the 3q22 locus interact epistatically."
More detail of all Human literatures about PCBP4

Pathways and Diseases

Pathway

Direct p53 effectors;PID Curated;200101

Disease

Lung cancer;FunDO

External Links

Links to Entrez Gene

57060

Links to all GeneRIF Items

57060

Links to iHOP

57060

Sequence Information

Nucleotide Sequence

>57060 : length: 1212
atgagcggctcggacgggggactggaggaggagccagagctcagcatcaccctcacgctg
cggatgctgatgcacgggaaggaagtgggcagcatcatcgggaagaagggcgagactgta
aagcgaatccgggagcagagcagtgcccggatcaccatctccgagggctcctgccctgaa
cgcatcaccaccatcaccgggtctacagcagctgtcttccatgcagtctccatgattgct
ttcaaactggatgaggacctttgtgctgctcctgcaaatggtggaaatgtctccaggcct
ccagtgaccctgcgccttgtcatccctgccagtcagtgtggctcactgattgggaaggct
ggcaccaagatcaaggagatccgagagactacgggtgcccaggtacaggtggcaggggac
ctgctccccaactccacagagcgagctgttacggtatctggggtgcctgatgccatcatc
ctgtgtgtgcgccagatctgcgctgttatcctggagtccccacccaaaggagccactatc
ccctaccatccgagcctctccctaggtactgttcttctctctgccaaccagggcttctct
gtccagggtcagtatggggctgtgaccccagctgaggtcaccaagctccagcagctctca
agccatgcggtcccctttgccacacccagcgtggtgccaggactggatcccggcacacag
accagctcacaggagttcttggttcccaacgatttgattggctgtgtgatcgggcgccag
ggcagcaagatcagcgagatccggcagatgtcaggggcacatatcaagatcgggaaccaa
gcagagggcgctggggagcggcatgtcaccatcactggctctccggtctccatcgccctg
gcccagtacctcatcactgcctgtctagagacggccaagtctacctctggggggacgccc
agctcggcccccgcagacctgcctgcccccttctcgccacccctgacggccctgcccaca
gctccccctggcctgctgggcacaccctatgccatctccctctccaacttcatcggcctc
aagcccatgcccttcttggctttaccacctgcttccccagggccgccgccgggcttggcg
gcctacactgccaagatggcagcagctaatgggagcaagaaggctgagcggcagaaattc
tccccctactga

Protein Sequence

>57060 : length: 403
MSGSDGGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPE
RITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKA
GTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI
PYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQ
TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIAL
AQYLITACLETAKSTSGGTPSSAPADLPAPFSPPLTALPTAPPGLLGTPYAISLSNFIGL
KPMPFLALPPASPGPPPGLAAYTAKMAAANGSKKAERQKFSPY



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