| General information | Literature | Expression | Regulation | Variant | Interaction |
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Basic Information |
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Gene ID | 55193 |
Name | PBRM1 |
Synonymous | BAF180|PB1;polybromo 1;PBRM1;polybromo 1 |
Definition | BRG1-associated factor 180|polybromo-1D|protein polybromo-1 |
Position | 3p21 |
Gene Type | protein-coding |
Gene Regulation: | ENCODE RegulomeDB Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database |
ENCODE RegulomeDB [Top] | |||
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Link to UCSC genome |
Matched SNP location |
dbSNP ID |
Regulatory information |
chr3:52579368-52719933 | chr3:52585990-52585990 | rs1961958 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|ITIH4, Motifs|PWM|STAT1, Motifs|PWM|STAT1, Motifs|PWM|STAT3, Motifs|PWM|STAT5A(homodimer), Motifs|PWM|STAT1, Motifs|PWM|STAT1, Motifs|PWM|Stat3, Motifs|PWM|Stat3, Chromatin_Structure|DNase-seq|Wi38 | chr3:52579368-52719933 | chr3:52599922-52599922 | rs6798246 | Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|FAIRE|Helas3, Protein_Binding|ChIP-seq|CEBPB | chr3:52579368-52719933 | chr3:52602274-52602274 | rs13063160 | Single_Nucleotides|eQTL|WDR51A, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|Footprinting|AREB6, Motifs|PWM|AREB6, Motifs|Footprinting|TBX5, Motifs|Footprinting|TBX5, Motifs|Footprinting|TBX5, Motifs|Footprinting|TBX5, Motifs|Footprinting|TBX5, Motifs|Footprinting|TBX5, Motifs|PWM|TBX5, Motifs|PWM|Bach1, Motifs|PWM|AP-1, Motifs|PWM|AP-1, Motifs|PWM|Bach2, Motifs|PWM|Jundm2, Motifs|PWM|Jundm2, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Hrce, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Lncap, Protein_Binding|ChIP-seq|GATA3, Protein_Binding|ChIP-seq|FOS, Protein_Binding|ChIP-seq|JUN, Protein_Binding|ChIP-seq|JUND | chr3:52579368-52719933 | chr3:52606292-52606292 | rs11714565 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Chromatin_Structure|DNase-seq|Hsmmt | chr3:52579368-52719933 | chr3:52626646-52626646 | rs2336146 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Motifs|PWM|Gata3, Motifs|PWM|GATA-4, Motifs|PWM|GATA-2, Motifs|PWM|GATA-2, Motifs|PWM|GATA-3, Chromatin_Structure|DNase-seq|Hah, Chromatin_Structure|DNase-seq|Hae | chr3:52579368-52719933 | chr3:52642487-52642487 | rs3774365 | Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Motifs|PWM|FOXP1, Motifs|PWM|Mtf1, Motifs|PWM|Tcfap2e, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|FAIRE|Medullo | chr3:52579368-52719933 | chr3:52643685-52643685 | rs3755806 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|ITIH4, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|FAIRE|Nhek, Chromatin_Structure|FAIRE|K562 | chr3:52579368-52719933 | chr3:52663882-52663882 | rs7622694 | Single_Nucleotides|eQTL|WDR51A, Protein_Binding|ChIP-seq|RFX3 | chr3:52579368-52719933 | chr3:52668119-52668119 | rs2083180 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Motifs|PWM|Arid3a, Motifs|PWM|TFII-I, Chromatin_Structure|DNase-seq|Hbmec | chr3:52579368-52719933 | chr3:52683864-52683864 | rs33967311 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|ITIH4, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Aosmc, Chromatin_Structure|DNase-seq|Panisd, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|FAIRE|Medullo, Chromatin_Structure|DNase-seq|Fibrop, Chromatin_Structure|DNase-seq|Medullo, Chromatin_Structure|DNase-seq|Htr8, Protein_Binding|ChIP-seq|RFX3 | chr3:52579368-52719933 | chr3:52718154-52718154 | rs10865973 | Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Chromatin_Structure|DNase-seq|Hasp | chr3:52579368-52719933 | chr3:52719398-52719398 | rs1866268 | Single_Nucleotides|eQTL|WDR51A, Single_Nucleotides|eQTL|FLJ12442, Single_Nucleotides|eQTL|NT5DC2, Motifs|PWM|FOXP1, Motifs|PWM|Foxj3, Motifs|PWM|Foxk1, Motifs|PWM|Foxl1, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|PWM|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|RUNX1, Motifs|Footprinting|FAC1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|FAC1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|FAC1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|FAC1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|core-bindingfactor, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|PWM|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|Footprinting|RUNX1, Motifs|PWM|Foxj1, Motifs|PWM|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Motifs|Footprinting|FAC1, Chromatin_Structure|DNase-seq|Huvec, Chromatin_Structure|DNase-seq|Gliobla, Chromatin_Structure|DNase-seq|Hepatocytes, Chromatin_Structure|DNase-seq|Hbmec, Chromatin_Structure|DNase-seq|Hasp, Chromatin_Structure|DNase-seq|Hrgec, Chromatin_Structure|DNase-seq|Gm19239, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Cll, Chromatin_Structure|DNase-seq|Helas3, Chromatin_Structure|DNase-seq|Chorion, Chromatin_Structure|FAIRE|Gm18507, Chromatin_Structure|DNase-seq|Gm19238, Chromatin_Structure|DNase-seq|H1hesc, Chromatin_Structure|DNase-seq|UrotsaUt189, Chromatin_Structure|DNase-seq|Gm12892, Chromatin_Structure|DNase-seq|Gm12891, Chromatin_Structure|FAIRE|Gm19239, Chromatin_Structure|DNase-seq|Helas3Ifna4h, Chromatin_Structure|DNase-seq|Hnpce, Chromatin_Structure|DNase-seq|Gm12878, Chromatin_Structure|DNase-seq|Gm19240, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|8988t, Chromatin_Structure|DNase-seq|Myometr, Chromatin_Structure|DNase-seq|Phte, Chromatin_Structure|DNase-seq|Urotsa, Chromatin_Structure|DNase-seq|Hmec, Chromatin_Structure|DNase-seq|A549, Chromatin_Structure|DNase-seq|Mcf7, Chromatin_Structure|DNase-seq|Gm18507, Chromatin_Structure|DNase-seq|Lncap, Chromatin_Structure|DNase-seq|Stellate, Chromatin_Structure|DNase-seq|Hepg2, Chromatin_Structure|DNase-seq|Panislets, Chromatin_Structure|FAIRE|K562, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|FAIRE|Gm12892, Chromatin_Structure|DNase-seq|Hmvecdblneo, Chromatin_Structure|DNase-seq|Htr8, Chromatin_Structure|DNase-seq|Hsmm, Chromatin_Structure|DNase-seq|T47d, Chromatin_Structure|DNase-seq|K562, Chromatin_Structure|DNase-seq|Progfib, Chromatin_Structure|DNase-seq|Ips, Chromatin_Structure|DNase-seq|Osteobl, Chromatin_Structure|DNase-seq|Nhek, Chromatin_Structure|DNase-seq|Hcfaa, Chromatin_Structure|FAIRE|Helas3, Chromatin_Structure|DNase-seq|Huh75, Chromatin_Structure|DNase-seq|Huh7, Chromatin_Structure|FAIRE|Gm12891, Protein_Binding|ChIP-seq|E2F1, Protein_Binding|ChIP-seq|CTBP2, Protein_Binding|ChIP-seq|E2F4, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|TBP, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|SIN3A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|MXI1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|TAF1, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POU2F2, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|HDAC2, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|E2F6, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|NFKB1, Protein_Binding|ChIP-seq|POLR2A, Protein_Binding|ChIP-seq|POLR2A |
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Transcription Factors [Top] |
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Regulation From TransFac database |
PB1(h) --> PB1(h) (expression). |
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Post Transcriptional Modification [Top] | |||
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Location (AA) |
PTM type |
Literature |
Database |
39 | Phosphoserine. | Swiss-Prot 53.0 | 54 | Phosphotyrosine. | Swiss-Prot 53.0 | 636 | Phosphoserine. | Swiss-Prot 53.0 | 1453 | Phosphoserine. | Swiss-Prot 53.0 | 948 | Phosphoserine | 15302935 | Phospho.ELM 6.0 | 54 | Phosphotyrosine | 16094384 | Phospho.ELM 6.0 |
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Methylation Profile [Top] | ||
There is no record for PBRM1 | ||