General information | Literature | Expression | Regulation | Variant | Interaction |
Basic Information |
|
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Gene ID | 6331 |
Name | SCN5A |
Synonymous | CDCD2|CMD1E|CMPD2|HB1|HB2|HBBD|HH1|ICCD|IVF|LQT3|Nav1.5|PFHB1|SSS1|VF1;sodium channel, voltage-gated, type V, alpha subunit;SCN5A;sodium channel, voltage-gated, type V, alpha subunit |
Definition | cardiac tetrodotoxin-insensitive voltage-dependent sodium channel alpha subunit|sodium channel protein cardiac muscle subunit alpha|sodium channel protein type 5 subunit alpha|voltage-gated sodium channel subunit alpha Nav1.5 |
Position | 3p21 |
Gene Type | protein-coding |
Gene Regulation: | ENCODE RegulomeDB Transcription Factors Post Transcriptional Modification From dbPTM Methylation Profile From DiseaseMeth database |
ENCODE RegulomeDB [Top] | |||
Link to UCSC genome |
Matched SNP location |
dbSNP ID |
Regulatory information |
chr3:38589548-38691164 | chr3:38619348-38619348 | rs7428882 | Single_Nucleotides|eQTL|CSRNP1, Chromatin_Structure|DNase-seq|H9es, Chromatin_Structure|DNase-seq|Hepatocytes |
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Transcription Factors [Top] | |
There is no record for SCN5A |
Post Transcriptional Modification [Top] | |||
Location (AA) |
PTM type |
Literature |
Database |
214 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 283 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 288 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 291 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 318 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 328 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 548 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 592 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 740 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 803 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 841 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 864 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 946 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1365 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1374 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1380 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1388 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1736 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1774 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1955 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 | 1494 | Phosphotyrosine | 15831816 | Phospho.ELM 6.0 | 1495 | Phosphotyrosine | 15831816 | Phospho.ELM 6.0 |
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Methylation Profile [Top] | ||
Chromosome |
Location |
Source |
---|---|---|
chr3 |
Promoter: 38665667 - 38667667 | Agilent_014791 |
chr3 |
Promoter: 38665667 - 38667667 | GSE27584 |
chr3 |
Promoter: 38665667 - 38667667 | GSE27584 |
chr3 |
Promoter: 38665667 - 38667667 | Agilent_014791_44K |