deTS Results for Presubiculum volume

Traits Information:

Trait ID:

5345

Presubiculum volume
Presubiculum volume
Expanded Trait Collection (ETC)
Meer , 2018
30279459
# cases = 0 | # controls = 21297
# SNPs = 6003775 | # genes = 21863
1.058
p (gene) < 0.05:  # TAGs = 1210
p (gene) < 0.01:  # TAGs = 240
p (gene) < 0.001:  # TAGs = 38
p (gene) < 1.0E-4:  # TAGs = 2
p (gene) < 1.0E-5: # TAGs = 0

Manhattan Plot of All SNPs in the GWAS



Manhattan Plot of All Genes in the GWAS

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deTS Enrichment Analysis Using the GTEx Panel

p < 0.05 p < 0.01 p < 0.001 0.1530.1530.2440.6290.4250.2440.2990.1950.920.920.4930.4930.2440.2440.1170.2990.1170.360.8050.2990.8050.2990.9970.1530.4930.8050.5620.360.9620.360.5620.08830.7520.2440.5620.1530.8890.6930.360.08830.750.7520.6930.1170.1530.9910.7520.1580.2540.3780.2540.8950.09120.2540.3780.7980.8950.3780.3780.09120.2540.1580.3780.0490.2540.2540.5220.09120.3780.7980.5220.6680.8950.7980.9561.00.7980.3780.6680.9560.5220.8950.6680.6680.9860.1580.1580.3770.6680.7980.7980.0490.6680.5220.660.661.01.01.00.660.660.660.661.01.01.01.01.00.660.660.661.00.08470.660.660.660.660.660.661.01.01.01.01.01.00.2831.01.00.660.660.2830.660.01880.01881.00.661.00.2830.660.661.0Adipose - SubcutaneousAdipose - Visceral (Omentum)Artery - AortaArtery - CoronaryArtery - TibialBrain - AmygdalaBrain - Anterior cingulate cortex (BA24)Brain - Caudate (basal ganglia)Brain - Cerebellar HemisphereBrain - CerebellumBrain - CortexBrain - Frontal Cortex (BA9)Brain - HippocampusBrain - HypothalamusBrain - Nucleus accumbens (basal ganglia)Brain - Putamen (basal ganglia)Brain - Spinal cord (cervical c-1)Brain - Substantia nigraBreast - Mammary TissueColon - SigmoidColon - TransverseEsophagus - Gastroesophageal JunctionEsophagus - MucosaEsophagus - MuscularisStomachHeart - Atrial AppendageHeart - Left VentricleAdrenal GlandKidney-CortexLiverLungMinor Salivary GlandMuscle - SkeletalNerve - TibialOvaryPancreasPituitaryProstateSkin - Not Sun Exposed (Suprapubic)Skin - Sun Exposed (Lower leg)Small Intestine - Terminal IleumSpleenTestisThyroidUterusVaginaWhole Blood

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deTS Enrichment Analysis Using the ENCODE Panel

p < 0.05 p < 0.01 p < 0.001 0.2030.5090.2540.3760.7730.4430.5060.3090.3720.7730.1590.0480.0880.9540.2540.8680.3760.8250.3760.3760.5830.3060.06680.2510.3720.0480.1590.3120.7730.8680.3690.2030.4430.9030.5790.7710.6510.4430.2030.7730.4430.9040.9330.4430.6380.880.3460.4880.2270.4880.6350.6370.2250.6380.1370.1370.2240.2270.8810.4880.7750.7750.6380.8810.8810.9480.07710.07650.880.07710.3460.6380.9830.9960.4850.1370.8810.4870.880.2250.6380.4880.2270.8810.4880.8810.9490.7750.6580.6580.6580.2820.6581.01.00.6580.6580.2820.2820.6580.08350.6580.6580.6580.6580.6581.01.01.01.00.2820.01851.01.00.6580.08411.01.01.00.2821.00.6580.6580.08380.6580.2820.6581.00.2821.01.01.0Subcutaneous Adipose TissueOmental Fat PadThoracic AortaCerebellumFrontal CortexSpinal CordOccipital LobeParietal LobeTemporal LobeDiencephalonBreast EpitheliumCamera type eyeSigmoid ColonTransverse ColonEsophagus Muscularis MucosaEsophagus Squamous EpitheliumGastroesophageal SphincterStomachHeartHeart - Left VentricleRight Atrium Auricular RegionAdrenal GlandMetanephrosLiverRight Lobe of LiverLungUpper Lobe of Left LungSkeletal Muscle TissueGastrocnemius MedialisTongueTibial NerveOvaryBody of PancreasPeyer's PatchProstate GlandSuprapubic SkinLower Leg SkinSkin of BodySpleenTestisThyroid GlandUmbilical CordUrinary BladderUterus

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